RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 SHISA3A0PJX4 238 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 SCAMP1O15126 338 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 NARSO43776 548 aaKnown RBP6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 SLC16A8O95907 504 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 CA3P07451 260 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 ADRB1P08588 477 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 MAT2AP31153 395 aaKnown RBP6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 PXNP49023 591 aaPredicted RBP6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 UBE2MP61081 183 aaKnown RBP6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 SP140Q13342 867 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 ETFDHQ16134 617 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 SYPL1Q16563 259 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 GSG1Q2KHT4 349 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 MINDY4Q4G0A6 757 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 FAM74A1Q5RGS3 127 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 C12orf73Q69YU5 71 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 ATRAIDQ6UW56 229 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 VITQ6UXI7 678 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 GSG1LQ6UXU4 331 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 BTN2A1Q7KYR7 527 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 HSD11B1LQ7Z5J1 315 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 SLC22A8Q8TCC7 542 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 C16orf78Q8WTQ4 265 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 SLC38A3Q99624 504 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 ALG8Q9BVK2 526 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 CPEB1Q9BZB8 566 aaKnown RBP6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 PLA2G12AQ9BZM1 189 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 SLC6A16Q9GZN6 736 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 LDAHQ9H6V9 325 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 MED20Q9H944 212 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 CYSLTR2Q9NS75 346 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 KLHL28Q9NXS3 571 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 CXXC1Q9P0U4 656 aaPredicted RBP6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 LIPT1Q9Y234 373 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 AP1M2Q9Y6Q5 423 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 C7orf66A4D0T2 115 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 FAM74A7A6NL05 159 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 FAM25EA8MYX2 175 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 SOCS6O14544 535 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 RNF13O43567 381 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 APOC1P02654 83 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 CBR1P16152 277 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 ZNF8P17098 575 aaPredicted RBP6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 CEBPBP17676 345 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 BMP7P18075 431 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 ANXA7P20073 488 aaKnown RBP6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 PSMB1P20618 241 aaKnown RBP6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 UQCRC2P22695 453 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 PTBP1P26599 531 aaKnown RBP eCLIP6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 ACADLP28330 430 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 GDI1P31150 447 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 FGF9P31371 208 aaPredicted RBP6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 LIMK1P53667 647 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 SEC13P55735 322 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 AP3S2P59780 193 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 GPNMBQ14956 572 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 GGTA1PQ4G0N0 100 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 FAM74A3Q4VXF1 159 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 C4orf46Q504U0 113 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 C2orf27AQ580R0 203 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 APOOLQ6UXV4 268 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 CCDC36Q8IYA8 594 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 OR52L1Q8NGH7 329 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 OR10K1Q8NGX5 313 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 NANPQ8TBE9 248 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 SCARB1Q8WTV0 552 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 ASB11Q8WXH4 323 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 SLC35G5Q96KT7 338 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 AIF1LQ9BQI0 150 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 ZNF471Q9BX82 626 aaPredicted RBP6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 MFFQ9GZY8 342 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 TMEM185BQ9H7F4 350 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 ISG20L2Q9H9L3 353 aaKnown RBP6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 NOX3Q9HBY0 568 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 GPATCH2Q9NW75 528 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 AKAP7Q9P0M2 348 aaPredicted RBP6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 STON1Q9Y6Q2 735 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 PIKFYVEQ9Y2I7 2098 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 RALGAPA2Q2PPJ7 1873 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 ZC3H12DA2A288 527 aaKnown RBP6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 D6RAR5 112 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 H3BSH0 61 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 SLC31A1O15431 190 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 FLRT2O43155 660 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 SOX30O94993 753 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 RASGRP1O95267 797 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 HLA-DQB1P01920 261 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 WNT1P04628 370 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 MPC1LP0DKB6 136 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 CD22P20273 847 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 RAD52P43351 418 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 RFX3P48380 749 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 RGS8P57771 180 aaPredicted RBP6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 PFN3P60673 137 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 FGL1Q08830 312 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 COL9A2Q14055 689 aaPredicted RBP6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 ELAVL3Q14576 367 aaKnown RBP6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 SLC25A35Q3KQZ1 300 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 CCSMST1Q4G0I0 132 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 BEX5Q5H9J7 111 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms