RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 ACOT11Q8WXI4 607 aaPredicted RBP9.73□□□□□ -0.85
NEFM-202ENST00000433454 PITX2Q99697 317 aa9.73□□□□□ -0.85
NEFM-202ENST00000433454 TRIM2Q9C040 744 aa9.73□□□□□ -0.85
NEFM-202ENST00000433454 FOXJ2Q9P0K8 574 aa9.73□□□□□ -0.85
NEFM-202ENST00000433454 HS3ST3B1Q9Y662 390 aa9.73□□□□□ -0.85
NEFM-202ENST00000433454 AHCTF1Q8WYP5 2266 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 SDK2Q58EX2 2172 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 IGHV1-45A0A0A0MS14 117 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 H3BNH8 94 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 ZFAND5O76080 213 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 DKK1O94907 266 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 IGHEP01854 428 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 THY1P04216 161 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 NGFRP08138 427 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 RAB40ALP0C0E4 278 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 UBL4AP11441 157 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 MMP11P24347 488 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 RYKP34925 604 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 ESRRGP62508 458 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 RPP38P78345 283 aaKnown RBP9.72□□□□□ -0.85
NEFM-202ENST00000433454 FNDC7Q5VTL7 733 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 TIPARPQ7Z3E1 657 aaKnown RBP9.72□□□□□ -0.85
NEFM-202ENST00000433454 ESX1Q8N693 406 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 FAM71CQ8NEG0 241 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 PIGXQ8TBF5 258 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 THAP3Q8WTV1 239 aaPredicted RBP9.72□□□□□ -0.85
NEFM-202ENST00000433454 CT55Q8WUE5 264 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 HRASLS5Q96KN8 279 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 ZNF700Q9H0M5 742 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 POLR1BQ9H9Y6 1135 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 LIN28AQ9H9Z2 209 aaKnown RBP9.72□□□□□ -0.85
NEFM-202ENST00000433454 KRCC1Q9NPI7 259 aaPredicted RBP9.72□□□□□ -0.85
NEFM-202ENST00000433454 HSPE1-MOB4S4R3N1 261 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 OR6C70A6NIJ9 312 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 COX6A1P12074 109 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 TCN2P20062 427 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 ACAA2P42765 397 aaKnown RBP9.72□□□□□ -0.85
NEFM-202ENST00000433454 LIMK1P53667 647 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 IL5RAQ01344 420 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 COX10Q12887 443 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 CD226Q15762 336 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 EXT1Q16394 746 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 BTBD16Q32M84 506 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 C1orf94Q6P1W5 598 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 ZER1Q7Z7L7 766 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 NKAIN4Q8IVV8 208 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 APLFQ8IW19 511 aaPredicted RBP9.72□□□□□ -0.85
NEFM-202ENST00000433454 AMER2Q8N7J2 671 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 LSMEM1Q8N8F7 131 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 GATSQ8NAP1 163 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 RNF217Q8TC41 542 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 PHOSPHO1Q8TCT1 267 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 TMEM255BQ8WV15 326 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 SPRY4Q9C004 299 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 EXOSC3Q9NQT5 275 aaKnown RBP9.72□□□□□ -0.85
NEFM-202ENST00000433454 BATF3Q9NR55 127 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 TCFL5Q9UL49 500 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 NPFFR2Q9Y5X5 522 aa9.72□□□□□ -0.85
NEFM-202ENST00000433454 GVINP1Q7Z2Y8 2422 aa9.71□□□□□ -0.85
NEFM-202ENST00000433454 A0A0B4J2E0 115 aa9.71□□□□□ -0.85
NEFM-202ENST00000433454 SPAARA0A1B0GVQ0 90 aa9.71□□□□□ -0.85
NEFM-202ENST00000433454 A0A1B0GWA3 101 aa9.71□□□□□ -0.85
NEFM-202ENST00000433454 A0A1B0GX12 115 aa9.71□□□□□ -0.85
NEFM-202ENST00000433454 E9PQ18 207 aa9.71□□□□□ -0.85
NEFM-202ENST00000433454 ADAM11O75078 769 aa9.71□□□□□ -0.85
NEFM-202ENST00000433454 OSMP13725 252 aa9.71□□□□□ -0.85
NEFM-202ENST00000433454 GSTM3P21266 225 aa9.71□□□□□ -0.85
NEFM-202ENST00000433454 NUP107P57740 925 aa9.71□□□□□ -0.85
NEFM-202ENST00000433454 ISL1P61371 349 aa9.71□□□□□ -0.85
NEFM-202ENST00000433454 COPZ1P61923 177 aa9.71□□□□□ -0.85
NEFM-202ENST00000433454 LSM11P83369 360 aaKnown RBP eCLIP9.71□□□□□ -0.85
NEFM-202ENST00000433454 EFR3AQ14156 821 aa9.71□□□□□ -0.85
NEFM-202ENST00000433454 NDUFAF6Q330K2 333 aa9.71□□□□□ -0.85
NEFM-202ENST00000433454 KCTD21Q4G0X4 260 aa9.71□□□□□ -0.85
NEFM-202ENST00000433454 CD300LDQ6UXZ3 194 aa9.71□□□□□ -0.85
NEFM-202ENST00000433454 MBOAT2Q6ZWT7 520 aa9.71□□□□□ -0.85
NEFM-202ENST00000433454 GRHL3Q8TE85 626 aa9.71□□□□□ -0.85
NEFM-202ENST00000433454 ARSGQ96EG1 525 aa9.71□□□□□ -0.85
NEFM-202ENST00000433454 DEFB126Q9BYW3 111 aa9.71□□□□□ -0.85
NEFM-202ENST00000433454 TBL1XR1Q9BZK7 514 aa9.71□□□□□ -0.85
NEFM-202ENST00000433454 PCDHGA6Q9Y5G7 932 aa9.71□□□□□ -0.85
NEFM-202ENST00000433454 CNOT1A5YKK6 2376 aaKnown RBP9.71□□□□□ -0.86
NEFM-202ENST00000433454 A0A1W2PQD3 144 aa9.71□□□□□ -0.86
NEFM-202ENST00000433454 ALG1L2C9J202 215 aa9.71□□□□□ -0.86
NEFM-202ENST00000433454 GTPBP1O00178 669 aaKnown RBP9.71□□□□□ -0.86
NEFM-202ENST00000433454 WWP2O00308 870 aa9.71□□□□□ -0.86
NEFM-202ENST00000433454 ZNF264O43296 627 aa9.71□□□□□ -0.86
NEFM-202ENST00000433454 CHP2O43745 196 aa9.71□□□□□ -0.86
NEFM-202ENST00000433454 PPM1BO75688 479 aa9.71□□□□□ -0.86
NEFM-202ENST00000433454 ENDOUP21128 410 aaKnown RBP9.71□□□□□ -0.86
NEFM-202ENST00000433454 CHMP24386 653 aa9.71□□□□□ -0.86
NEFM-202ENST00000433454 GSSP48637 474 aa9.71□□□□□ -0.86
NEFM-202ENST00000433454 RPS15P62841 145 aaKnown RBP9.71□□□□□ -0.86
NEFM-202ENST00000433454 CD47Q08722 323 aa9.71□□□□□ -0.86
NEFM-202ENST00000433454 SKP2Q13309 424 aa9.71□□□□□ -0.86
NEFM-202ENST00000433454 KIRREL2Q6UWL6 708 aa9.71□□□□□ -0.86
NEFM-202ENST00000433454 APOOLQ6UXV4 268 aa9.71□□□□□ -0.86
NEFM-202ENST00000433454 C16orf47Q6ZP98 133 aaPredicted RBP9.71□□□□□ -0.86
NEFM-202ENST00000433454 NRMQ8IXM6 262 aa9.71□□□□□ -0.86
NEFM-202ENST00000433454 TMCO5AQ8N6Q1 288 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms