RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 KRT4P19013 534 aa12.41□□□□□ -0.42
SEC13-211ENST00000431352 ATP6V1C1P21283 382 aa12.41□□□□□ -0.42
SEC13-211ENST00000431352 HPCAL1P37235 193 aa12.41□□□□□ -0.42
SEC13-211ENST00000431352 SERPINB4P48594 390 aa12.41□□□□□ -0.42
SEC13-211ENST00000431352 PCLAFQ15004 111 aa12.41□□□□□ -0.42
SEC13-211ENST00000431352 ZNF239Q16600 458 aaKnown RBP12.41□□□□□ -0.42
SEC13-211ENST00000431352 NDUFAF6Q330K2 333 aa12.41□□□□□ -0.42
SEC13-211ENST00000431352 SPDYE7PQ495Y7 208 aa12.41□□□□□ -0.42
SEC13-211ENST00000431352 TMEM201Q5SNT2 666 aa12.41□□□□□ -0.42
SEC13-211ENST00000431352 KANK2Q63ZY3 851 aa12.41□□□□□ -0.42
SEC13-211ENST00000431352 MISPQ8IVT2 679 aa12.41□□□□□ -0.42
SEC13-211ENST00000431352 LILRA2Q8N149 483 aa12.41□□□□□ -0.42
SEC13-211ENST00000431352 ZNF614Q8N883 585 aa12.41□□□□□ -0.42
SEC13-211ENST00000431352 KIF18AQ8NI77 898 aa12.41□□□□□ -0.42
SEC13-211ENST00000431352 FAM110BQ8TC76 370 aa12.41□□□□□ -0.42
SEC13-211ENST00000431352 PHOSPHO1Q8TCT1 267 aa12.41□□□□□ -0.42
SEC13-211ENST00000431352 ACTRT2Q8TDY3 377 aa12.41□□□□□ -0.42
SEC13-211ENST00000431352 AKAP1Q92667 903 aaKnown RBP eCLIP12.41□□□□□ -0.42
SEC13-211ENST00000431352 OSTF1Q92882 214 aa12.41□□□□□ -0.42
SEC13-211ENST00000431352 S100PBPQ96BU1 408 aa12.41□□□□□ -0.42
SEC13-211ENST00000431352 ZNF764Q96H86 408 aaPredicted RBP12.41□□□□□ -0.42
SEC13-211ENST00000431352 METTL2AQ96IZ6 378 aaKnown RBP12.41□□□□□ -0.42
SEC13-211ENST00000431352 TACO1Q9BSH4 297 aaKnown RBP12.41□□□□□ -0.42
SEC13-211ENST00000431352 GATA5Q9BWX5 397 aaPredicted RBP12.41□□□□□ -0.42
SEC13-211ENST00000431352 BTBD2Q9BX70 525 aa12.41□□□□□ -0.42
SEC13-211ENST00000431352 SRXN1Q9BYN0 137 aa12.41□□□□□ -0.42
SEC13-211ENST00000431352 HHATLQ9HCP6 504 aa12.41□□□□□ -0.42
SEC13-211ENST00000431352 SIRT3Q9NTG7 399 aaPredicted RBP12.41□□□□□ -0.42
SEC13-211ENST00000431352 ACSS1Q9NUB1 689 aaPredicted RBP12.41□□□□□ -0.42
SEC13-211ENST00000431352 NTMQ9P121 344 aa12.41□□□□□ -0.42
SEC13-211ENST00000431352 LAMP3Q9UQV4 416 aa12.41□□□□□ -0.42
SEC13-211ENST00000431352 DNAJC15Q9Y5T4 150 aa12.41□□□□□ -0.42
SEC13-211ENST00000431352 PIP5K1BO14986 540 aa12.4□□□□□ -0.42
SEC13-211ENST00000431352 TBX19O60806 448 aa12.4□□□□□ -0.42
SEC13-211ENST00000431352 HMGN2P05204 90 aaKnown RBP12.4□□□□□ -0.42
SEC13-211ENST00000431352 CHRNGP07510 517 aa12.4□□□□□ -0.42
SEC13-211ENST00000431352 LINGO3P0C6S8 592 aa12.4□□□□□ -0.42
SEC13-211ENST00000431352 BCKDHAP12694 445 aa12.4□□□□□ -0.42
SEC13-211ENST00000431352 IL32P24001 234 aa12.4□□□□□ -0.42
SEC13-211ENST00000431352 FRKP42685 505 aaPredicted RBP12.4□□□□□ -0.42
SEC13-211ENST00000431352 ASMTP46597 345 aa12.4□□□□□ -0.42
SEC13-211ENST00000431352 CARD18P57730 90 aa12.4□□□□□ -0.42
SEC13-211ENST00000431352 TP53BP2Q13625 1128 aa12.4□□□□□ -0.42
SEC13-211ENST00000431352 CAPRIN1Q14444 709 aaKnown RBP12.4□□□□□ -0.42
SEC13-211ENST00000431352 CDC73Q6P1J9 531 aa12.4□□□□□ -0.42
SEC13-211ENST00000431352 CBLN3Q6UW01 205 aa12.4□□□□□ -0.42
SEC13-211ENST00000431352 LRIG3Q6UXM1 1119 aa12.4□□□□□ -0.42
SEC13-211ENST00000431352 NUFIP2Q7Z417 695 aaKnown RBP12.4□□□□□ -0.42
SEC13-211ENST00000431352 R3HCC1LQ7Z5L2 792 aaKnown RBP12.4□□□□□ -0.42
SEC13-211ENST00000431352 TRABD2AQ86V40 505 aa12.4□□□□□ -0.42
SEC13-211ENST00000431352 TMCO5AQ8N6Q1 288 aa12.4□□□□□ -0.42
SEC13-211ENST00000431352 OR7A2PQ8NGA2 310 aa12.4□□□□□ -0.42
SEC13-211ENST00000431352 RFWD2Q8NHY2 731 aa12.4□□□□□ -0.42
SEC13-211ENST00000431352 RAB3IL1Q8TBN0 382 aa12.4□□□□□ -0.42
SEC13-211ENST00000431352 RNF128Q8TEB7 428 aa12.4□□□□□ -0.42
SEC13-211ENST00000431352 TWIST2Q8WVJ9 160 aa12.4□□□□□ -0.42
SEC13-211ENST00000431352 C1orf50Q9BV19 199 aa12.4□□□□□ -0.42
SEC13-211ENST00000431352 GLRX2Q9NS18 164 aa12.4□□□□□ -0.42
SEC13-211ENST00000431352 MID2Q9UJV3 735 aa12.4□□□□□ -0.42
SEC13-211ENST00000431352 GPR52Q9Y2T5 361 aa12.4□□□□□ -0.42
SEC13-211ENST00000431352 IGHV3-15A0A0B4J1V0 119 aa12.39□□□□□ -0.43
SEC13-211ENST00000431352 SCAMP2O15127 329 aaKnown RBP12.39□□□□□ -0.43
SEC13-211ENST00000431352 PABPC4LP0CB38 370 aaKnown RBP12.39□□□□□ -0.43
SEC13-211ENST00000431352 LAMP1P11279 417 aa12.39□□□□□ -0.43
SEC13-211ENST00000431352 PSMB1P20618 241 aaKnown RBP12.39□□□□□ -0.43
SEC13-211ENST00000431352 EIF1P41567 113 aaKnown RBP12.39□□□□□ -0.43
SEC13-211ENST00000431352 CCR4P51679 360 aa12.39□□□□□ -0.43
SEC13-211ENST00000431352 TMEM176BQ3YBM2 270 aaPredicted RBP12.39□□□□□ -0.43
SEC13-211ENST00000431352 GTF2IRD2BQ6EKJ0 949 aa12.39□□□□□ -0.43
SEC13-211ENST00000431352 ZCCHC12Q6PEW1 402 aa12.39□□□□□ -0.43
SEC13-211ENST00000431352 TFAP2EQ6VUC0 442 aa12.39□□□□□ -0.43
SEC13-211ENST00000431352 GTF2IRD2Q86UP8 949 aa12.39□□□□□ -0.43
SEC13-211ENST00000431352 TUSC5Q8IXB3 177 aa12.39□□□□□ -0.43
SEC13-211ENST00000431352 CNPY4Q8N129 248 aa12.39□□□□□ -0.43
SEC13-211ENST00000431352 BANPQ8N9N5 519 aa12.39□□□□□ -0.43
SEC13-211ENST00000431352 MAPK1IP1LQ8NDC0 245 aa12.39□□□□□ -0.43
SEC13-211ENST00000431352 STEAP2Q8NFT2 490 aa12.39□□□□□ -0.43
SEC13-211ENST00000431352 FBXO27Q8NI29 283 aa12.39□□□□□ -0.43
SEC13-211ENST00000431352 IGFBPL1Q8WX77 278 aa12.39□□□□□ -0.43
SEC13-211ENST00000431352 MECRQ9BV79 373 aa12.39□□□□□ -0.43
SEC13-211ENST00000431352 TIGARQ9NQ88 270 aa12.39□□□□□ -0.43
SEC13-211ENST00000431352 KLHL13Q9P2N7 655 aa12.39□□□□□ -0.43
SEC13-211ENST00000431352 CARD8Q9Y2G2 431 aa12.39□□□□□ -0.43
SEC13-211ENST00000431352 TMED5Q9Y3A6 229 aa12.39□□□□□ -0.43
SEC13-211ENST00000431352 RNF115Q9Y4L5 304 aa12.39□□□□□ -0.43
SEC13-211ENST00000431352 PRR14LQ5THK1 2151 aa12.38□□□□□ -0.43
SEC13-211ENST00000431352 A0A1W2PQD3 144 aa12.38□□□□□ -0.43
SEC13-211ENST00000431352 TMEM114B3SHH9 223 aa12.38□□□□□ -0.43
SEC13-211ENST00000431352 H3BNH8 94 aa12.38□□□□□ -0.43
SEC13-211ENST00000431352 KIF2AO00139 706 aaPredicted RBP12.38□□□□□ -0.43
SEC13-211ENST00000431352 GTPBP1O00178 669 aaKnown RBP12.38□□□□□ -0.43
SEC13-211ENST00000431352 ZNF195O14628 629 aa12.38□□□□□ -0.43
SEC13-211ENST00000431352 TRIM13O60858 407 aa12.38□□□□□ -0.43
SEC13-211ENST00000431352 C6orf47O95873 294 aa12.38□□□□□ -0.43
SEC13-211ENST00000431352 ELK4P28324 431 aa12.38□□□□□ -0.43
SEC13-211ENST00000431352 LCN1P31025 176 aa12.38□□□□□ -0.43
SEC13-211ENST00000431352 SOAT1P35610 550 aa12.38□□□□□ -0.43
SEC13-211ENST00000431352 RPS4XP62701 263 aaKnown RBP12.38□□□□□ -0.43
SEC13-211ENST00000431352 VEZF1Q14119 521 aa12.38□□□□□ -0.43
SEC13-211ENST00000431352 PTGR1Q14914 329 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms