RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 FAM122AQ96E09 287 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 C1QTNF3Q9BXJ4 246 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 PINK1Q9BXM7 581 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 VDAC3Q9Y277 283 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 M0R036 132 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 TRMUO75648 421 aaKnown RBP12.05□□□□□ -0.48
PTCH1-207ENST00000429896 APOL3O95236 402 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 DCTP40126 519 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 AP3S2P59780 193 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 ALG10BQ5I7T1 473 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 NKAPLQ5M9Q1 402 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 FAM71E1Q6IPT2 247 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 ZNF554Q86TJ5 538 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 NETO1Q8TDF5 533 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 PTTG2Q9NZH5 202 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 HSPA12AO43301 675 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 ABOP16442 354 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 RGS19P49795 217 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 SLC14A1Q13336 389 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 Q6ZSR9 355 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 OR8J2Q8NGG1 315 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 AIFM2Q9BRQ8 373 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 ZNF471Q9BX82 626 aaPredicted RBP12.05□□□□□ -0.48
PTCH1-207ENST00000429896 MYO16Q9Y6X6 1858 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 A8MV72 311 aaPredicted RBP12.05□□□□□ -0.48
PTCH1-207ENST00000429896 H3BML4 177 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 PLOD2O00469 737 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 PRKACGP22612 351 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 TUBG1P23258 451 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 RHDQ02161 417 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 OCLNQ16625 522 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 PELI3Q8N2H9 469 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 PACRGLQ8N7B6 248 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 TMEM105Q8N8V8 129 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 ORAI3Q9BRQ5 295 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 ZNF700Q9H0M5 742 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 CHST8Q9H2A9 424 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 FXYD6-FXYD2A0A087WZ82 144 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 ALDOCP09972 364 aaKnown RBP12.05□□□□□ -0.48
PTCH1-207ENST00000429896 PCGF2P35227 344 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 HTR3AP46098 478 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 DAG1Q14118 895 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 CPZQ66K79 652 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 CPEB2Q7Z5Q1 589 aaKnown RBP12.05□□□□□ -0.48
PTCH1-207ENST00000429896 KLHL36Q8N4N3 616 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 PNLDC1Q8NA58 520 aaKnown RBP12.05□□□□□ -0.48
PTCH1-207ENST00000429896 FXYD6Q9H0Q3 95 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 POU2F3Q9UKI9 436 aa12.05□□□□□ -0.48
PTCH1-207ENST00000429896 IGHV5-51A0A0C4DH38 117 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 KLK10O43240 276 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 ABCB7O75027 752 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 RHCEP18577 417 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 ADH7P40394 386 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 CYB561P49447 251 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 CRYZQ08257 329 aaKnown RBP12.04□□□□□ -0.48
PTCH1-207ENST00000429896 RAB39AQ14964 217 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 UGT8Q16880 541 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 CES4AQ5XG92 561 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 WDR74Q6RFH5 385 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-207ENST00000429896 CCDC36Q8IYA8 594 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 POGLUT1Q8NBL1 392 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 AMDHD1Q96NU7 426 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 EVA1AQ9H8M9 152 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 KLRC4-KLRK1H3BQV0 150 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 EI24O14681 340 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 CD2P06729 351 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 ZGLP1P0C6A0 271 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 VAMP1P23763 118 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 RORCP51449 518 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 HBA1P69905 142 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 TSTQ16762 297 aaKnown RBP12.04□□□□□ -0.48
PTCH1-207ENST00000429896 RUNDC3AQ59EK9 446 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 PLCZ1Q86YW0 608 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 OR1J4Q8NGS1 313 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 OSTF1Q92882 214 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 FKBP14Q9NWM8 211 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 TRAPPC13A5PLN9 417 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 T-ENOLP0DO92 83 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 ZNF84P51523 738 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 CDH15P55291 814 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 CCNJQ5T5M9 372 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 TSSK6Q9BXA6 273 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 SH3BGRL2Q9UJC5 107 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 HCRTR1O43613 425 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 FARS2O95363 451 aaKnown RBP12.04□□□□□ -0.48
PTCH1-207ENST00000429896 PABPC4LP0CB38 370 aaKnown RBP12.04□□□□□ -0.48
PTCH1-207ENST00000429896 PNMTP11086 282 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 FOLR1P15328 257 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 IQCCQ4KMZ1 466 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 THOC7Q6I9Y2 204 aaKnown RBP12.04□□□□□ -0.48
PTCH1-207ENST00000429896 MAMDC2Q7Z304 686 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-207ENST00000429896 WDR20Q8TBZ3 569 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 BAIAP2Q9UQB8 552 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 SPEF1Q9Y4P9 236 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 ASB1Q9Y576 335 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 ADORA3P0DMS8 318 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 PEPDP12955 493 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 LRRC37A5PQ49AS3 106 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 SERPINA11Q86U17 422 aa12.04□□□□□ -0.48
PTCH1-207ENST00000429896 SLC41A3Q96GZ6 507 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms