RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 COMMD3Q9UBI1 195 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 NDRG2Q9UN36 371 aaKnown RBP8.1□□□□□ -1.11
GABPB1-205ENST00000429662 BAIAP2Q9UQB8 552 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 TMEM5Q9Y2B1 443 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 CARD8Q9Y2G2 431 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 PRKAB1Q9Y478 270 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 KIF26AQ9ULI4 1882 aaPredicted RBP8.1□□□□□ -1.11
GABPB1-205ENST00000429662 APC2O95996 2303 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 CACNA1EQ15878 2313 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 IGKV1-8A0A0C4DH67 115 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 ANKRD34BA5PLL1 514 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 URADA6NGE7 173 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 UNC119BA6NIH7 251 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 CPSF4LA6NMK7 179 aaKnown RBP8.1□□□□□ -1.11
GABPB1-205ENST00000429662 TFECO14948 347 aaPredicted RBP8.1□□□□□ -1.11
GABPB1-205ENST00000429662 PGRMC2O15173 223 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 LYRM1O43325 122 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 RNF13O43567 381 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 TMEM127O75204 238 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 ALX3O95076 343 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 RCBTB2O95199 551 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 PCDH8O95206 1070 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 C1QBP02746 253 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 ALPPL2P10696 532 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 ZNF10P21506 573 aaPredicted RBP8.1□□□□□ -1.11
GABPB1-205ENST00000429662 C5AR1P21730 350 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 ALAS2P22557 587 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 ATP12AP54707 1039 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 RPS15AP62244 130 aaKnown RBP8.1□□□□□ -1.11
GABPB1-205ENST00000429662 RGS1Q08116 209 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 ZNF155Q12901 538 aaPredicted RBP8.1□□□□□ -1.11
GABPB1-205ENST00000429662 MRPL28Q13084 256 aaKnown RBP8.1□□□□□ -1.11
GABPB1-205ENST00000429662 DUSP8Q13202 625 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 TNK1Q13470 666 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 GAS6Q14393 721 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 MLF2Q15773 248 aaPredicted RBP8.1□□□□□ -1.11
GABPB1-205ENST00000429662 CLPPQ16740 277 aaPredicted RBP8.1□□□□□ -1.11
GABPB1-205ENST00000429662 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.1□□□□□ -1.11
GABPB1-205ENST00000429662 UAP1L1Q3KQV9 507 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 ARHGAP11BQ3KRB8 267 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 HBMQ6B0K9 141 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 ZCCHC12Q6PEW1 402 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 PARM1Q6UWI2 310 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 TMEM107Q6UX40 140 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 ZNF767PQ75MW2 155 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 MEPCEQ7L2J0 689 aaKnown RBP8.1□□□□□ -1.11
GABPB1-205ENST00000429662 CXXC5Q7LFL8 322 aaKnown RBP8.1□□□□□ -1.11
GABPB1-205ENST00000429662 GDF7Q7Z4P5 450 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 ZNF438Q7Z4V0 828 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 LRRC28Q86X40 367 aaPredicted RBP8.1□□□□□ -1.11
GABPB1-205ENST00000429662 CDK20Q8IZL9 346 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 ACBD7Q8N6N7 88 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 AMER3Q8N944 861 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 TEX19Q8NA77 164 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 OR2L3Q8NG85 312 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 OR4Q3Q8NH05 313 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 OR8K5Q8NH50 307 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 NT5CQ8TCD5 201 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 SLC2A12Q8TD20 617 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 GANCQ8TET4 914 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 SPRYD4Q8WW59 207 aaPredicted RBP8.1□□□□□ -1.11
GABPB1-205ENST00000429662 ING5Q8WYH8 240 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 SLC22A18Q96BI1 424 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 FAM46AQ96IP4 442 aaKnown RBP8.1□□□□□ -1.11
GABPB1-205ENST00000429662 ZNF681Q96N22 645 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 TM9SF2Q99805 663 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 GTPBP2Q9BX10 602 aaKnown RBP8.1□□□□□ -1.11
GABPB1-205ENST00000429662 KLHL31Q9H511 634 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 KIR3DX1Q9H7L2 352 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 MARCH7Q9H992 704 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 TRIM36Q9NQ86 728 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 TRPV5Q9NQA5 729 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 POLE3Q9NRF9 147 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 C14orf105Q9NVL8 296 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 PTTG3PQ9NZH4 202 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 NUFIP1Q9UHK0 495 aaKnown RBP8.1□□□□□ -1.11
GABPB1-205ENST00000429662 GMEB2Q9UKD1 530 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 ZNF443Q9Y2A4 671 aaPredicted RBP8.1□□□□□ -1.11
GABPB1-205ENST00000429662 SLC17A4Q9Y2C5 497 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 ATG4BQ9Y4P1 393 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 PCYT1BQ9Y5K3 369 aaPredicted RBP8.1□□□□□ -1.11
GABPB1-205ENST00000429662 TRAPPC13A5PLN9 417 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 ANTXRLA6NF34 631 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 ANKRD61A6NGH8 418 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 PRR19A6NJB7 356 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 SLC22A31A6NKX4 558 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 J3QRE1 110 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 GTPBP1O00178 669 aaKnown RBP8.09□□□□□ -1.12
GABPB1-205ENST00000429662 HPGDSO60760 199 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 SERPINA3P01011 423 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 MT-ND5P03915 603 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 DBIP07108 87 aaKnown RBP8.09□□□□□ -1.12
GABPB1-205ENST00000429662 HOXC4P09017 264 aaPredicted RBP8.09□□□□□ -1.12
GABPB1-205ENST00000429662 PEPDP12955 493 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 GNSP15586 552 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 BMP7P18075 431 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 CELP19835 753 aa8.09□□□□□ -1.12
GABPB1-205ENST00000429662 APEX1P27695 318 aaKnown RBP8.09□□□□□ -1.12
GABPB1-205ENST00000429662 RBMS1P29558 406 aaKnown RBP8.09□□□□□ -1.12
GABPB1-205ENST00000429662 TLX1P31314 330 aaPredicted RBP8.09□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms