RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 RTP5Q14D33 572 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 SLC36A3Q495N2 470 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 PLXDC2Q6UX71 529 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 CBR4Q8N4T8 237 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 NATD1Q8N6N6 113 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 PHOSPHO1Q8TCT1 267 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 APOBEC4Q8WW27 367 aaKnown RBP8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 JSRP1Q96MG2 331 aaPredicted RBP8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 SIGLEC12Q96PQ1 595 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 DOHHQ9BU89 302 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 ING2Q9H160 280 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 SMURF2Q9HAU4 748 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 RSL24D1Q9UHA3 163 aaKnown RBP8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 NXT1Q9UKK6 140 aaKnown RBP8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 OAZ3Q9UMX2 235 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 CORO2BQ9UQ03 480 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 ZNF443Q9Y2A4 671 aaPredicted RBP8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 PADI2Q9Y2J8 665 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 DSPPQ9NZW4 1301 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 CRYBG3Q68DQ2 2970 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 LRRN3E7EW58 273 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 KPNA4O00629 521 aaPredicted RBP8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 PCDH17O14917 1159 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 KIAA0513O60268 411 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 TRMUO75648 421 aaKnown RBP8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 PRSS23O95084 383 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 RASAL1O95294 804 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 CST1P01037 141 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 IL12BP29460 328 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 MERTKQ12866 999 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 CRB2Q5IJ48 1285 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 PLAG1Q6DJT9 500 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 EIF3MQ7L2H7 374 aaKnown RBP8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 ZNF227Q86WZ6 799 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 PROSER1Q86XN7 944 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 ERI1Q8IV48 349 aaKnown RBP8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 TMCO5AQ8N6Q1 288 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 DUSP19Q8WTR2 217 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 TMIGD2Q96BF3 282 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 ADI1Q9BV57 179 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 MED11Q9P086 117 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 KCND3Q9UK17 655 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 DOCK7Q96N67 2140 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 ADAM10O14672 748 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 IGFBP1P08833 259 aaPredicted RBP8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 CDK4P11802 303 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 MST1P26927 711 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 RRM2P31350 389 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 POLR2IP36954 125 aaKnown RBP8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 PLA2G5P39877 138 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 KCNJ5P48544 419 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 CDH12P55289 794 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 OC90Q02509 493 aaPredicted RBP8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 SEC23BQ15437 767 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 DECR1Q16698 335 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 GXYLT1Q4G148 440 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 LYPD8Q6UX82 237 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 WDR88Q6ZMY6 472 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 RPS19BP1Q86WX3 136 aaKnown RBP8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 ZNF619Q8N2I2 560 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 CADM2Q8N3J6 435 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 FDCSPQ8NFU4 85 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 DIO2Q92813 273 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 FGF11Q92914 225 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 KIAA1143Q96AT1 154 aaPredicted RBP8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 MOAP1Q96BY2 351 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 GNRHR2Q96P88 292 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 STMN3Q9NZ72 180 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 PRODH2Q9UF12 536 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 C19orf25Q9UFG5 118 aaPredicted RBP8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 IL20RAQ9UHF4 553 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 VDAC3Q9Y277 283 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 GMEB1Q9Y692 573 aa8.72□□□□□ -1.01
HMGCLL1-206ENST00000428842 A0A087WXM4 84 aa8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 TRBV4-1A0A0J9YWV2 114 aa8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 BLACEA4D250 179 aa8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 PINLYPA6NC86 204 aa8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 TMEM247A6NEH6 219 aa8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 FRG2CA6NGY1 282 aa8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 DUXAA6NLW8 204 aa8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 C21orf140B9A014 251 aa8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 TSPAN2O60636 221 aa8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 MITFO75030 526 aaPredicted RBP8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 ZFAND5O76080 213 aa8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 CLIC3O95833 236 aa8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 IL11P20809 199 aa8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 CBLP22681 906 aa8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 DNASE1L1P49184 302 aa8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 ZNF136P52737 540 aa8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 EEF1A1P68104 462 aaKnown RBP8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 IL1RL1Q01638 556 aa8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 CHRNB3Q05901 458 aa8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 ACER2Q5QJU3 275 aa8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 ARSKQ6UWY0 536 aa8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 TNIP2Q8NFZ5 429 aa8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 OR7G1Q8NGA0 311 aa8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 OR9Q2Q8NGE9 314 aa8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 KCNE4Q8WWG9 221 aa8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 HOXB13Q92826 284 aaPredicted RBP8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 NXPE2Q96DL1 559 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms