RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 PRIM2P49643 509 aa16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 CDH11P55287 796 aa16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 FOXF1Q12946 379 aa16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 ITGADQ13349 1161 aa16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 STK11Q15831 433 aa16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 C6orf52Q5T4I8 152 aa16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 ANKRD26P1Q6NSI1 321 aa16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 NOXRED1Q6NXP6 359 aa16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 SEZ6L2Q6UXD5 910 aa16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 FCRLAQ7L513 359 aa16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 ZNF572Q7Z3I7 529 aaPredicted RBP16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 CCNYL1Q8N7R7 359 aa16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 NUP43Q8NFH3 380 aa16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 OR6Y1Q8NGX8 325 aa16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 CEP70Q8NHQ1 597 aa16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 FAM76AQ8TAV0 307 aa16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 HOXB13Q92826 284 aaPredicted RBP16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 L3HYPDHQ96EM0 354 aa16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 USB1Q9BQ65 265 aaKnown RBP16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 GSTO2Q9H4Y5 243 aa16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 UBQLN4Q9NRR5 601 aa16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 CDC42EP3Q9UKI2 254 aa16.25■□□□□ 0.19
UPK3BP1-201ENST00000428678 RAMP1O60894 148 aa16.24■□□□□ 0.19
UPK3BP1-201ENST00000428678 CRCPO75575 148 aa16.24■□□□□ 0.19
UPK3BP1-201ENST00000428678 PRKD3O94806 890 aa16.24■□□□□ 0.19
UPK3BP1-201ENST00000428678 C8BP07358 591 aa16.24■□□□□ 0.19
UPK3BP1-201ENST00000428678 YES1P07947 543 aa16.24■□□□□ 0.19
UPK3BP1-201ENST00000428678 LINGO3P0C6S8 592 aa16.24■□□□□ 0.19
UPK3BP1-201ENST00000428678 PTNP21246 168 aa16.24■□□□□ 0.19
UPK3BP1-201ENST00000428678 NUDT6P53370 316 aa16.24■□□□□ 0.19
UPK3BP1-201ENST00000428678 MANFP55145 182 aaKnown RBP16.24■□□□□ 0.19
UPK3BP1-201ENST00000428678 C21orf58P58505 322 aa16.24■□□□□ 0.19
UPK3BP1-201ENST00000428678 CD226Q15762 336 aa16.24■□□□□ 0.19
UPK3BP1-201ENST00000428678 NRF1Q16656 503 aa16.24■□□□□ 0.19
UPK3BP1-201ENST00000428678 DTX2Q86UW9 622 aa16.24■□□□□ 0.19
UPK3BP1-201ENST00000428678 SLC16A11Q8NCK7 471 aa16.24■□□□□ 0.19
UPK3BP1-201ENST00000428678 ATP6V1C2Q8NEY4 427 aa16.24■□□□□ 0.19
UPK3BP1-201ENST00000428678 CIDECQ96AQ7 238 aaPredicted RBP16.24■□□□□ 0.19
UPK3BP1-201ENST00000428678 OTUB1Q96FW1 271 aaPredicted RBP16.24■□□□□ 0.19
UPK3BP1-201ENST00000428678 EGLN2Q96KS0 407 aa16.24■□□□□ 0.19
UPK3BP1-201ENST00000428678 TSPYL1Q9H0U9 437 aa16.24■□□□□ 0.19
UPK3BP1-201ENST00000428678 GP6Q9HCN6 339 aa16.24■□□□□ 0.19
UPK3BP1-201ENST00000428678 A0A087WUV0 522 aaPredicted RBP16.23■□□□□ 0.19
UPK3BP1-201ENST00000428678 EXOC1LA0A1B0GW35 172 aa16.23■□□□□ 0.19
UPK3BP1-201ENST00000428678 FAM234BA2RU67 622 aa16.23■□□□□ 0.19
UPK3BP1-201ENST00000428678 ZNF814B7Z6K7 855 aa16.23■□□□□ 0.19
UPK3BP1-201ENST00000428678 UBFD1O14562 309 aaKnown RBP16.23■□□□□ 0.19
UPK3BP1-201ENST00000428678 LYZL6O75951 148 aa16.23■□□□□ 0.19
UPK3BP1-201ENST00000428678 NUDT14O95848 222 aa16.23■□□□□ 0.19
UPK3BP1-201ENST00000428678 F12P00748 615 aaPredicted RBP16.23■□□□□ 0.19
UPK3BP1-201ENST00000428678 ELK4P28324 431 aa16.23■□□□□ 0.19
UPK3BP1-201ENST00000428678 PPA1Q15181 289 aa16.23■□□□□ 0.19
UPK3BP1-201ENST00000428678 DUSP5Q16690 384 aa16.23■□□□□ 0.19
UPK3BP1-201ENST00000428678 TMEM176BQ3YBM2 270 aaPredicted RBP16.23■□□□□ 0.19
UPK3BP1-201ENST00000428678 CCNJQ5T5M9 372 aa16.23■□□□□ 0.19
UPK3BP1-201ENST00000428678 CLEC2AQ6UVW9 174 aa16.23■□□□□ 0.19
UPK3BP1-201ENST00000428678 SYT10Q6XYQ8 523 aa16.23■□□□□ 0.19
UPK3BP1-201ENST00000428678 LCA5Q86VQ0 697 aa16.23■□□□□ 0.19
UPK3BP1-201ENST00000428678 TDRPQ86YL5 185 aa16.23■□□□□ 0.19
UPK3BP1-201ENST00000428678 COX18Q8N8Q8 333 aa16.23■□□□□ 0.19
UPK3BP1-201ENST00000428678 ZFP28Q8NHY6 868 aa16.23■□□□□ 0.19
UPK3BP1-201ENST00000428678 FAM110BQ8TC76 370 aa16.23■□□□□ 0.19
UPK3BP1-201ENST00000428678 JADE3Q92613 823 aa16.23■□□□□ 0.19
UPK3BP1-201ENST00000428678 MS4A4EQ96PG1 132 aa16.23■□□□□ 0.19
UPK3BP1-201ENST00000428678 FMO2Q99518 471 aa16.23■□□□□ 0.19
UPK3BP1-201ENST00000428678 IQCGQ9H095 443 aaKnown RBP16.23■□□□□ 0.19
UPK3BP1-201ENST00000428678 B3GALT5Q9Y2C3 310 aa16.23■□□□□ 0.19
UPK3BP1-201ENST00000428678 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 IGHV3-15A0A0B4J1V0 119 aa16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 A0A1W2PQD3 144 aa16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 GJE1A6NN92 205 aa16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 SHISA9B4DS77 424 aa16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 ZNF195O14628 629 aa16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 EFNA2O43921 213 aa16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 RSL1D1O76021 490 aaKnown RBP16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 ALOX5P09917 674 aa16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 LCN1P31025 176 aa16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 SERPINB4P48594 390 aa16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 RNF144AP50876 292 aaPredicted RBP16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 ZNF117Q03924 483 aa16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 CKAP4Q07065 602 aaKnown RBP16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 TMEM249Q2WGJ8 235 aa16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 AGAP6Q5VW22 663 aa16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 TIFABQ6ZNK6 161 aa16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 Q6ZT83 130 aa16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 TRIM46Q7Z4K8 759 aa16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 SLC43A2Q8N370 569 aa16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 OR2W6PQ8NHA6 318 aa16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 FBXO27Q8NI29 283 aa16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 PHOSPHO1Q8TCT1 267 aa16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 IFT81Q8WYA0 676 aa16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 MUCL1Q96DR8 90 aa16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 GIMAP5Q96F15 307 aa16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 C16orf58Q96GQ5 468 aa16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 ADAD1Q96M93 576 aaKnown RBP16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 KCNK17Q96T54 332 aa16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 BEX2Q9BXY8 128 aa16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 GRIP2Q9C0E4 1043 aa16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 RRAGDQ9NQL2 400 aaPredicted RBP16.22■□□□□ 0.19
UPK3BP1-201ENST00000428678 YLPM1P49750 1951 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms