RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 OR2AK2Q8NG84 335 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 SMAP2Q8WU79 429 aaPredicted RBP4.79□□□□□ -1.64
RIF1-203ENST00000428287 PCNPQ8WW12 178 aaKnown RBP4.79□□□□□ -1.64
RIF1-203ENST00000428287 KISS1RQ969F8 398 aaPredicted RBP4.79□□□□□ -1.64
RIF1-203ENST00000428287 CAMK1GQ96NX5 476 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 ZNF426Q9BUY5 554 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 EDEM2Q9BV94 578 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 WDR26Q9H7D7 661 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 TMEM100Q9NV29 134 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 LTBP2Q14767 1821 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 KDELR3O43731 214 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 FABP1P07148 127 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 CD3GP09693 182 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 ZNF8P17098 575 aaPredicted RBP4.79□□□□□ -1.64
RIF1-203ENST00000428287 ACRV1P26436 265 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 IRF8Q02556 426 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 TUSC3Q13454 348 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 MRPL58Q14197 206 aaKnown RBP4.79□□□□□ -1.64
RIF1-203ENST00000428287 KRT33BQ14525 404 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 MLC1Q15049 377 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 TMEM64Q6YI46 380 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 ANKRD33Q7Z3H0 272 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 PAQR7Q86WK9 346 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 OR56A3Q8NH54 315 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 STOML3Q8TAV4 291 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 CD99L2Q8TCZ2 262 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 SMIM19Q96E16 107 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 MYEOVQ96EZ4 313 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 ASIC4Q96FT7 647 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 PAAF1Q9BRP4 392 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 SGPP1Q9BX95 441 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 C20orf85Q9H1P6 137 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 ZFYVE1Q9HBF4 777 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 MYNNQ9NPC7 610 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 ACSS1Q9NUB1 689 aaPredicted RBP4.79□□□□□ -1.64
RIF1-203ENST00000428287 MYEF2Q9P2K5 600 aaKnown RBP4.79□□□□□ -1.64
RIF1-203ENST00000428287 LHX3Q9UBR4 397 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 PIN4Q9Y237 131 aaKnown RBP4.79□□□□□ -1.64
RIF1-203ENST00000428287 ASPMQ8IZT6 3477 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 A0A1B0GW55 424 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 RP2O75695 350 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 DUX4L2P0CJ85 424 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 DUX4L3P0CJ86 424 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 DUX4L4P0CJ87 422 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 DUX4L5P0CJ88 424 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 DUX4L6P0CJ89 424 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 DUX4L7P0CJ90 424 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 ATF1P18846 271 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 AP3S2P59780 193 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 LBHQ53QV2 105 aaPredicted RBP4.79□□□□□ -1.64
RIF1-203ENST00000428287 ZNF57Q68EA5 555 aaPredicted RBP4.79□□□□□ -1.64
RIF1-203ENST00000428287 LYPD4Q6UWN0 246 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 DRAM2Q6UX65 266 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 SLCO4C1Q6ZQN7 724 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 USP53Q70EK8 1073 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 SAMD14Q8IZD0 417 aaPredicted RBP4.79□□□□□ -1.64
RIF1-203ENST00000428287 OR8K3Q8NH51 312 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 GATAD2BQ8WXI9 593 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 DIO2Q92813 273 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 EGFL8Q99944 293 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 MED10Q9BTT4 135 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 TM6SF2Q9BZW4 377 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 RSPH9Q9H1X1 276 aaPredicted RBP4.79□□□□□ -1.64
RIF1-203ENST00000428287 ASB8Q9H765 288 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 DNAJC11Q9NVH1 559 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 ASH2LQ9UBL3 628 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 DUX4Q9UBX2 424 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 ST3GAL5Q9UNP4 418 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 TLN2Q9Y4G6 2542 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 C2orf92A0A1B0GVN3 265 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 F8W810 466 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 OR5F1O95221 314 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 SNAI1O95863 264 aaPredicted RBP4.79□□□□□ -1.64
RIF1-203ENST00000428287 HIST1H2ABP04908 130 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 UCHL1P09936 223 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 COX7A2P14406 83 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 SOX18P35713 384 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 CCR8P51685 355 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 CDH11P55287 796 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 MLLT1Q03111 559 aaPredicted RBP4.79□□□□□ -1.64
RIF1-203ENST00000428287 SCARB2Q14108 478 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 DMKNQ6E0U4 476 aaPredicted RBP4.79□□□□□ -1.64
RIF1-203ENST00000428287 FAM71E1Q6IPT2 247 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 HIST3H2AQ7L7L0 130 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 HJURPQ8NCD3 748 aaPredicted RBP4.79□□□□□ -1.64
RIF1-203ENST00000428287 HIST1H2ACQ93077 130 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 PNPLA2Q96AD5 504 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 SLC25A38Q96DW6 304 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 PRRC1Q96M27 445 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 BIN3Q9NQY0 253 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 SLC35A3Q9Y2D2 325 aa4.79□□□□□ -1.64
RIF1-203ENST00000428287 SIRT4Q9Y6E7 314 aaPredicted RBP4.79□□□□□ -1.64
RIF1-203ENST00000428287 DBX1A6NMT0 343 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 SURF4O15260 269 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 EIF4EP06730 217 aaKnown RBP4.78□□□□□ -1.64
RIF1-203ENST00000428287 RAB40ALP0C0E4 278 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 CD37P11049 281 aa4.78□□□□□ -1.64
RIF1-203ENST00000428287 BTF3P20290 206 aaKnown RBP4.78□□□□□ -1.64
RIF1-203ENST00000428287 RPS11P62280 158 aaKnown RBP eCLIP4.78□□□□□ -1.64
RIF1-203ENST00000428287 B4GALNT1Q00973 533 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms