RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 MARCOQ9UEW3 520 aaPredicted RBP16.57■□□□□ 0.24
GPC1-205ENST00000427506 DTNAQ9Y4J8 743 aa16.57■□□□□ 0.24
GPC1-205ENST00000427506 C7orf72A4D263 438 aa16.56■□□□□ 0.24
GPC1-205ENST00000427506 SYNGR4O95473 234 aa16.56■□□□□ 0.24
GPC1-205ENST00000427506 AK1P00568 194 aa16.56■□□□□ 0.24
GPC1-205ENST00000427506 PLGP00747 810 aaPredicted RBP16.56■□□□□ 0.24
GPC1-205ENST00000427506 UQCRC2P22695 453 aa16.56■□□□□ 0.24
GPC1-205ENST00000427506 DNAJA1P31689 397 aaKnown RBP16.56■□□□□ 0.24
GPC1-205ENST00000427506 S100A3P33764 101 aa16.56■□□□□ 0.24
GPC1-205ENST00000427506 EIF1P41567 113 aaKnown RBP16.56■□□□□ 0.24
GPC1-205ENST00000427506 KIR2DL2P43627 348 aaPredicted RBP16.56■□□□□ 0.24
GPC1-205ENST00000427506 P2RX1P51575 399 aa16.56■□□□□ 0.24
GPC1-205ENST00000427506 CASP9P55211 416 aa16.56■□□□□ 0.24
GPC1-205ENST00000427506 GPR68Q15743 365 aa16.56■□□□□ 0.24
GPC1-205ENST00000427506 DPY19L1Q2PZI1 675 aa16.56■□□□□ 0.24
GPC1-205ENST00000427506 SPANXN4Q5MJ08 99 aa16.56■□□□□ 0.24
GPC1-205ENST00000427506 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.56■□□□□ 0.24
GPC1-205ENST00000427506 PDSS1Q5T2R2 415 aa16.56■□□□□ 0.24
GPC1-205ENST00000427506 CBLN3Q6UW01 205 aa16.56■□□□□ 0.24
GPC1-205ENST00000427506 C16orf62Q7Z3J2 963 aa16.56■□□□□ 0.24
GPC1-205ENST00000427506 SPATA19Q7Z5L4 167 aa16.56■□□□□ 0.24
GPC1-205ENST00000427506 BTLAQ7Z6A9 289 aa16.56■□□□□ 0.24
GPC1-205ENST00000427506 TMCO5AQ8N6Q1 288 aa16.56■□□□□ 0.24
GPC1-205ENST00000427506 OR10D3Q8NH80 312 aa16.56■□□□□ 0.24
GPC1-205ENST00000427506 RFWD2Q8NHY2 731 aa16.56■□□□□ 0.24
GPC1-205ENST00000427506 KLHDC3Q9BQ90 382 aa16.56■□□□□ 0.24
GPC1-205ENST00000427506 OPN3Q9H1Y3 402 aaPredicted RBP16.56■□□□□ 0.24
GPC1-205ENST00000427506 OR51I1Q9H343 314 aa16.56■□□□□ 0.24
GPC1-205ENST00000427506 SERHL2Q9H4I8 314 aa16.56■□□□□ 0.24
GPC1-205ENST00000427506 PAQR5Q9NXK6 330 aaPredicted RBP16.56■□□□□ 0.24
GPC1-205ENST00000427506 NDRG3Q9UGV2 375 aa16.56■□□□□ 0.24
GPC1-205ENST00000427506 MCTS1Q9ULC4 181 aaKnown RBP16.56■□□□□ 0.24
GPC1-205ENST00000427506 TACC2O95359 2948 aa16.56■□□□□ 0.24
GPC1-205ENST00000427506 POLQO75417 2590 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 CSMD2Q7Z408 3487 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 GOLGA8QA0A0J9YX86 632 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 FAM221AA4D161 298 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 SH3D21A4FU49 640 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 GOLGA8OA6NCC3 632 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 TRPC5OSA6NMA1 111 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 E9PBE3 544 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 GOLGA8NF8WBI6 632 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 SDHDO14521 159 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 TNFSF11O14788 317 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 CASKO14936 926 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 ANKRD28O15084 1053 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 HDAC3O15379 428 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 CXCL13O43927 109 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 STX11O75558 287 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 AQP8O94778 261 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 LINGO3P0C6S8 592 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 PSMA4P25789 261 aaKnown RBP16.55■□□□□ 0.24
GPC1-205ENST00000427506 EPHA3P29320 983 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 KCNJ5P48544 419 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 PHC1P78364 1004 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 FOXF1Q12946 379 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 FGFBP1Q14512 234 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 NDUFAF6Q330K2 333 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 FAM174BQ3ZCQ3 159 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 BEND6Q5SZJ8 279 aaPredicted RBP16.55■□□□□ 0.24
GPC1-205ENST00000427506 ATAD3BQ5T9A4 648 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 HBMQ6B0K9 141 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 NXNQ6DKJ4 435 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 OGFOD2Q6N063 350 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 ESPNLQ6ZVH7 1005 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 CDC20BQ86Y33 519 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 LILRA2Q8N149 483 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 CHDHQ8NE62 594 aaPredicted RBP16.55■□□□□ 0.24
GPC1-205ENST00000427506 OR2V1Q8NHB1 315 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 RAB3IL1Q8TBN0 382 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 POC1BQ8TC44 478 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 DACH2Q96NX9 599 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 WDR55Q9H6Y2 383 aaPredicted RBP16.55■□□□□ 0.24
GPC1-205ENST00000427506 MANSC1Q9H8J5 431 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 TMBIM4Q9HC24 238 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 EDARQ9UNE0 448 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 PROCRQ9UNN8 238 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 OTOGQ6ZRI0 2925 aa16.55■□□□□ 0.24
GPC1-205ENST00000427506 PCNX3Q9H6A9 2034 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 NPIPB9F8W1W9 429 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 SLCO1B7G3V0H7 640 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 OIP5O43482 229 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 SCN2BO60939 215 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 SNNO75324 88 aaPredicted RBP16.54■□□□□ 0.24
GPC1-205ENST00000427506 CYP7B1O75881 506 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 AGR2O95994 175 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 ALDOCP09972 364 aaKnown RBP16.54■□□□□ 0.24
GPC1-205ENST00000427506 OR12D1P0DN82 309 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 UBL4AP11441 157 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 SFTPDP35247 375 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 CHI3L1P36222 383 aaPredicted RBP16.54■□□□□ 0.24
GPC1-205ENST00000427506 CCR4P51679 360 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 ART1P52961 327 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 SLC18A1P54219 525 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 SUMO3P55854 103 aaPredicted RBP16.54■□□□□ 0.24
GPC1-205ENST00000427506 CTBP2P56545 445 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 UFM1P61960 85 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 FAM27E3Q08E93 113 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 CASP8Q14790 479 aa16.54■□□□□ 0.24
GPC1-205ENST00000427506 ARHGAP11BQ3KRB8 267 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms