RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 PLCZ1Q86YW0 608 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 CHERPQ8IWX8 916 aaKnown RBP6.75□□□□□ -1.33
LINC01049-201ENST00000426840 FITM2Q8N6M3 262 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 FADS6Q8N9I5 356 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 PCYOX1LQ8NBM8 494 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 CCDC197Q8NCU1 140 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 OR2M3Q8NG83 312 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 BCAS4Q8TDM0 211 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 DUSP19Q8WTR2 217 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 SLC38A5Q8WUX1 472 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 FANCD2OSQ96PS1 177 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 TRNT1Q96Q11 434 aaKnown RBP6.75□□□□□ -1.33
LINC01049-201ENST00000426840 LRRC37BQ96QE4 947 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 SLX1AQ9BQ83 275 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 GPATCH1Q9BRR8 931 aaKnown RBP6.75□□□□□ -1.33
LINC01049-201ENST00000426840 THUMPD3Q9BV44 507 aaKnown RBP6.75□□□□□ -1.33
LINC01049-201ENST00000426840 RSPO3Q9BXY4 272 aaPredicted RBP6.75□□□□□ -1.33
LINC01049-201ENST00000426840 TTTY12Q9BZ98 90 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 TRIM8Q9BZR9 551 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 HOXD1Q9GZZ0 328 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 DEFB127Q9H1M4 99 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 UBQLN3Q9H347 655 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 RAD21L1Q9H4I0 556 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 ZDHHC11Q9H8X9 412 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 MTHFD2LQ9H903 347 aaPredicted RBP6.75□□□□□ -1.33
LINC01049-201ENST00000426840 A4GALTQ9NPC4 353 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 POLE3Q9NRF9 147 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 AGPAT4Q9NRZ5 378 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 ARL8BQ9NVJ2 186 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 GID8Q9NWU2 228 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 KLRF1Q9NZS2 232 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 CRIM1Q9NZV1 1036 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.75□□□□□ -1.33
LINC01049-201ENST00000426840 MKLN1Q9UL63 735 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 BOKQ9UMX3 212 aaPredicted RBP6.75□□□□□ -1.33
LINC01049-201ENST00000426840 NPIPA1Q9UND3 350 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 ABCG2Q9UNQ0 655 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 WDR45Q9Y484 360 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 WIF1Q9Y5W5 379 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 NCKAP5O14513 1909 aa6.75□□□□□ -1.33
LINC01049-201ENST00000426840 DNAJC13O75165 2243 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 ZNF407Q9C0G0 2248 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 IGLV3-32A0A0A0MS00 114 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 CENPVL1A0A0U1RR11 272 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 NDUFAB1O14561 156 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 AIM2O14862 343 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 SCO2O43819 266 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 SLC28A2O43868 658 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 KIAA0513O60268 411 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 ZIC3O60481 467 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 CBR3O75828 277 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 H6PDO95479 791 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 ANGPTL1O95841 491 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 IGHG3P01860 377 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 NR2F1P10589 423 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 ZNF24P17028 368 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 SLC6A2P23975 617 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 ELAVL4P26378 380 aaKnown RBP6.74□□□□□ -1.33
LINC01049-201ENST00000426840 DCTP40126 519 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 MAGEA5P43359 124 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 CLK3P49761 638 aaKnown RBP6.74□□□□□ -1.33
LINC01049-201ENST00000426840 MTPNP58546 118 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 C17orf67Q0P5P2 114 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 FADDQ13158 208 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 SLC10A1Q14973 349 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 CD226Q15762 336 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 GPAT3Q53EU6 434 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 KRTCAP3Q53RY4 240 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 RABL3Q5HYI8 236 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 HACD2Q6Y1H2 254 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 BNC2Q6ZN30 1099 aaPredicted RBP6.74□□□□□ -1.33
LINC01049-201ENST00000426840 NET1Q7Z628 596 aaPredicted RBP6.74□□□□□ -1.33
LINC01049-201ENST00000426840 FGD2Q7Z6J4 655 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 MTERF4Q7Z6M4 381 aaKnown RBP6.74□□□□□ -1.33
LINC01049-201ENST00000426840 ZNF605Q86T29 641 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 SLC22A16Q86VW1 577 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 CALHM3Q86XJ0 350 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 PTOV1Q86YD1 416 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 SLC15A3Q8IY34 581 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 ZNF619Q8N2I2 560 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 FAM109AQ8N4B1 249 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 METTL25Q8N6Q8 603 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 GATSQ8NAP1 163 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 OR1J4Q8NGS1 313 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 PMM1Q92871 262 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 MAL2Q969L2 176 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 CMTM5Q96DZ9 223 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 TMEM19Q96HH6 336 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 ZNF597Q96LX8 424 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 JSRP1Q96MG2 331 aaPredicted RBP6.74□□□□□ -1.33
LINC01049-201ENST00000426840 GPR137Q96N19 417 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 ZNF583Q96ND8 569 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 KLHDC3Q9BQ90 382 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 SLC39A3Q9BRY0 314 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 TBL1XR1Q9BZK7 514 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 DSN1Q9H410 356 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 TMEM38AQ9H6F2 299 aa6.74□□□□□ -1.33
LINC01049-201ENST00000426840 ZNF703Q9H7S9 590 aaPredicted RBP6.74□□□□□ -1.33
LINC01049-201ENST00000426840 KAT8Q9H7Z6 458 aaKnown RBP6.74□□□□□ -1.33
LINC01049-201ENST00000426840 EFCAB1Q9HAE3 211 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms