RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 KNTC1P50748 2209 aa12.46□□□□□ -0.41
USP42-203ENST00000426246 LOC100509620A0A075B734 347 aa12.46□□□□□ -0.41
USP42-203ENST00000426246 NUPL2O15504 423 aaKnown RBP12.46□□□□□ -0.41
USP42-203ENST00000426246 TBX6O95947 436 aaPredicted RBP12.46□□□□□ -0.41
USP42-203ENST00000426246 LIMS3P0CW19 117 aa12.46□□□□□ -0.41
USP42-203ENST00000426246 LIMS4P0CW20 117 aa12.46□□□□□ -0.41
USP42-203ENST00000426246 GIFP27352 417 aa12.46□□□□□ -0.41
USP42-203ENST00000426246 ANXA11P50995 505 aaKnown RBP12.46□□□□□ -0.41
USP42-203ENST00000426246 ATP12AP54707 1039 aa12.46□□□□□ -0.41
USP42-203ENST00000426246 EEF1A2Q05639 463 aaKnown RBP12.46□□□□□ -0.41
USP42-203ENST00000426246 UBE3DQ7Z6J8 389 aa12.46□□□□□ -0.41
USP42-203ENST00000426246 OR2T33Q8NG76 320 aa12.46□□□□□ -0.41
USP42-203ENST00000426246 OR4C6Q8NH72 309 aa12.46□□□□□ -0.41
USP42-203ENST00000426246 POP5Q969H6 163 aaKnown RBP12.46□□□□□ -0.41
USP42-203ENST00000426246 C4orf36Q96KX1 117 aa12.46□□□□□ -0.41
USP42-203ENST00000426246 PDCD1LG2Q9BQ51 273 aa12.46□□□□□ -0.41
USP42-203ENST00000426246 SPATA9Q9BWV2 254 aa12.46□□□□□ -0.41
USP42-203ENST00000426246 OR52D1Q9H346 318 aa12.46□□□□□ -0.41
USP42-203ENST00000426246 POM121CA8CG34 1229 aa12.46□□□□□ -0.42
USP42-203ENST00000426246 GTPBP1O00178 669 aaKnown RBP12.46□□□□□ -0.42
USP42-203ENST00000426246 HRGP04196 525 aa12.46□□□□□ -0.42
USP42-203ENST00000426246 DPTQ07507 201 aa12.46□□□□□ -0.42
USP42-203ENST00000426246 POU4F3Q15319 338 aa12.46□□□□□ -0.42
USP42-203ENST00000426246 SMAD2Q15796 467 aaKnown RBP12.46□□□□□ -0.42
USP42-203ENST00000426246 OR52E2Q8NGJ4 325 aa12.46□□□□□ -0.42
USP42-203ENST00000426246 OR5H6Q8NGV6 325 aa12.46□□□□□ -0.42
USP42-203ENST00000426246 FAM174AQ8TBP5 190 aa12.46□□□□□ -0.42
USP42-203ENST00000426246 RASSF5Q8WWW0 418 aa12.46□□□□□ -0.42
USP42-203ENST00000426246 CCDC32Q9BV29 185 aa12.46□□□□□ -0.42
USP42-203ENST00000426246 TTYH1Q9H313 450 aaPredicted RBP12.46□□□□□ -0.42
USP42-203ENST00000426246 LHX9Q9NQ69 397 aa12.46□□□□□ -0.42
USP42-203ENST00000426246 MRPL39Q9NYK5 338 aaKnown RBP12.46□□□□□ -0.42
USP42-203ENST00000426246 CHURC1-FNTBB4DL54 471 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 IMPA2O14732 288 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 PLA2G10O15496 165 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 EML2O95834 649 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 ATP5A1P25705 553 aaKnown RBP12.45□□□□□ -0.42
USP42-203ENST00000426246 ACADLP28330 430 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 ZNF81P51508 661 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 VSX2P58304 361 aaPredicted RBP12.45□□□□□ -0.42
USP42-203ENST00000426246 CRYZQ08257 329 aaKnown RBP12.45□□□□□ -0.42
USP42-203ENST00000426246 STX4Q12846 297 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 FCN2Q15485 313 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 MLF2Q15773 248 aaPredicted RBP12.45□□□□□ -0.42
USP42-203ENST00000426246 PRRT3Q5FWE3 981 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 MZT2AQ6P582 158 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 FRRS1Q6ZNA5 592 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 CHMP1BQ7LBR1 199 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 ELMOD2Q8IZ81 293 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 OR7G2Q8NG99 324 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 OR2A1Q8NGT9 310 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 SUN3Q8TAQ9 357 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 TMEM163Q8TC26 289 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 ERMAPQ96PL5 475 aaPredicted RBP12.45□□□□□ -0.42
USP42-203ENST00000426246 CD180Q99467 661 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 NDOR1Q9UHB4 597 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 IKZF2Q9UKS7 526 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 STON1Q9Y6Q2 735 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 OR6C74A6NCV1 312 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 I3L521 148 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 FABP7O15540 132 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 ORC5O43913 435 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 HLA-DQA2P01906 255 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 ABATP80404 500 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 CST6Q15828 149 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 AGBL4Q5VU57 503 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 LCTLQ6UWM7 567 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 ZNF765Q7L2R6 523 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 ACBD7Q8N6N7 88 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 RFKQ969G6 155 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 SLC35A4Q96G79 324 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 NDUFB11Q9NX14 153 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 CLDND1Q9NY35 253 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 APOBEC3BQ9UH17 382 aaKnown RBP12.45□□□□□ -0.42
USP42-203ENST00000426246 A8MVJ9 347 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 CSN2P05814 226 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 SLC35G6P0C7Q6 338 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 ACP2P11117 423 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 NDUFV2P19404 249 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 MAOBP27338 520 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 TEAD1P28347 426 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 RPA4Q13156 261 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 GPR50Q13585 617 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 ZNF267Q14586 743 aaPredicted RBP12.45□□□□□ -0.42
USP42-203ENST00000426246 NTRK2Q16620 822 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 DUSP5Q16690 384 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 SLC25A35Q3KQZ1 300 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 OAFQ86UD1 273 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 OR4M1Q8NGD0 313 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 FAM131CQ96AQ9 280 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 PRRC1Q96M27 445 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 FGF22Q9HCT0 170 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 STMN3Q9NZ72 180 aa12.45□□□□□ -0.42
USP42-203ENST00000426246 ACOD1A6NK06 481 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 H7C1C5 153 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 ADH7P40394 386 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 LCN6P62502 163 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 CDC20Q12834 499 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 CRMP1Q14194 572 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 ZNF770Q6IQ21 691 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms