RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 SEMA6DQ8NFY4 1073 aa12.48□□□□□ -0.41
HDAC6-206ENST00000426196 OR4F6Q8NGB9 312 aa12.48□□□□□ -0.41
HDAC6-206ENST00000426196 OR52N5Q8NH56 324 aa12.48□□□□□ -0.41
HDAC6-206ENST00000426196 SH3YL1Q96HL8 342 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-206ENST00000426196 FOXN4Q96NZ1 517 aa12.48□□□□□ -0.41
HDAC6-206ENST00000426196 TRIM31Q9BZY9 425 aa12.48□□□□□ -0.41
HDAC6-206ENST00000426196 FKRPQ9H9S5 495 aa12.48□□□□□ -0.41
HDAC6-206ENST00000426196 BCO1Q9HAY6 547 aa12.48□□□□□ -0.41
HDAC6-206ENST00000426196 VPS29Q9UBQ0 182 aa12.48□□□□□ -0.41
HDAC6-206ENST00000426196 PCTPQ9UKL6 214 aa12.48□□□□□ -0.41
HDAC6-206ENST00000426196 C19orf53Q9UNZ5 99 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-206ENST00000426196 CIB4A0PJX0 185 aa12.47□□□□□ -0.41
HDAC6-206ENST00000426196 TTC36A6NLP5 189 aa12.47□□□□□ -0.41
HDAC6-206ENST00000426196 M0R1B8 84 aa12.47□□□□□ -0.41
HDAC6-206ENST00000426196 RGS14O43566 566 aa12.47□□□□□ -0.41
HDAC6-206ENST00000426196 PCDH7O60245 1069 aa12.47□□□□□ -0.41
HDAC6-206ENST00000426196 RAD51DO75771 328 aa12.47□□□□□ -0.41
HDAC6-206ENST00000426196 OXSR1O95747 527 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-206ENST00000426196 JUNP05412 331 aaKnown RBP12.47□□□□□ -0.41
HDAC6-206ENST00000426196 PCMT1P22061 227 aa12.47□□□□□ -0.41
HDAC6-206ENST00000426196 GABRA3P34903 492 aa12.47□□□□□ -0.41
HDAC6-206ENST00000426196 NCBP2P52298 156 aaKnown RBP eCLIP12.47□□□□□ -0.41
HDAC6-206ENST00000426196 SCGB2A2Q13296 93 aa12.47□□□□□ -0.41
HDAC6-206ENST00000426196 C3orf62Q6ZUJ4 267 aa12.47□□□□□ -0.41
HDAC6-206ENST00000426196 MISPQ8IVT2 679 aa12.47□□□□□ -0.41
HDAC6-206ENST00000426196 ZNF100Q8IYN0 542 aa12.47□□□□□ -0.41
HDAC6-206ENST00000426196 ZNF433Q8N7K0 673 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-206ENST00000426196 POC1BQ8TC44 478 aa12.47□□□□□ -0.41
HDAC6-206ENST00000426196 ZFP90Q8TF47 636 aa12.47□□□□□ -0.41
HDAC6-206ENST00000426196 PHF21BQ96EK2 531 aa12.47□□□□□ -0.41
HDAC6-206ENST00000426196 NSUN5Q96P11 429 aaKnown RBP12.47□□□□□ -0.41
HDAC6-206ENST00000426196 SORCS2Q96PQ0 1159 aa12.47□□□□□ -0.41
HDAC6-206ENST00000426196 PSD2Q9BQI7 771 aa12.47□□□□□ -0.41
HDAC6-206ENST00000426196 LMF2Q9BU23 707 aaKnown RBP12.47□□□□□ -0.41
HDAC6-206ENST00000426196 BPESC1Q9GZL8 116 aa12.47□□□□□ -0.41
HDAC6-206ENST00000426196 CXorf36Q9H7Y0 433 aa12.47□□□□□ -0.41
HDAC6-206ENST00000426196 PRKDCP78527 4128 aaKnown RBP12.47□□□□□ -0.41
HDAC6-206ENST00000426196 IGHV3-15A0A0B4J1V0 119 aa12.46□□□□□ -0.41
HDAC6-206ENST00000426196 A0A0G2JK05 382 aa12.46□□□□□ -0.41
HDAC6-206ENST00000426196 FAM157AC9JC47 383 aa12.46□□□□□ -0.41
HDAC6-206ENST00000426196 KIF2AO00139 706 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-206ENST00000426196 TP73O15350 636 aa12.46□□□□□ -0.41
HDAC6-206ENST00000426196 PSMG1O95456 288 aa12.46□□□□□ -0.41
HDAC6-206ENST00000426196 OTCP00480 354 aa12.46□□□□□ -0.41
HDAC6-206ENST00000426196 IGKV1D-16P01601 117 aa12.46□□□□□ -0.41
HDAC6-206ENST00000426196 C2P06681 752 aa12.46□□□□□ -0.41
HDAC6-206ENST00000426196 NGFRP08138 427 aa12.46□□□□□ -0.41
HDAC6-206ENST00000426196 HPGDP15428 266 aa12.46□□□□□ -0.41
HDAC6-206ENST00000426196 FOXF1Q12946 379 aa12.46□□□□□ -0.41
HDAC6-206ENST00000426196 SLC29A2Q14542 456 aa12.46□□□□□ -0.41
HDAC6-206ENST00000426196 TMEM176BQ3YBM2 270 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-206ENST00000426196 GLE1Q53GS7 698 aaKnown RBP12.46□□□□□ -0.41
HDAC6-206ENST00000426196 RINLQ6ZS11 566 aa12.46□□□□□ -0.41
HDAC6-206ENST00000426196 KLHL7Q8IXQ5 586 aa12.46□□□□□ -0.41
HDAC6-206ENST00000426196 OR2L13Q8N349 312 aa12.46□□□□□ -0.41
HDAC6-206ENST00000426196 LINC01356Q8N9X3 169 aa12.46□□□□□ -0.41
HDAC6-206ENST00000426196 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.46□□□□□ -0.41
HDAC6-206ENST00000426196 FBXO17Q96EF6 278 aa12.46□□□□□ -0.41
HDAC6-206ENST00000426196 SOX7Q9BT81 388 aa12.46□□□□□ -0.41
HDAC6-206ENST00000426196 NTMQ9P121 344 aa12.46□□□□□ -0.41
HDAC6-206ENST00000426196 DMGDHQ9UI17 866 aaKnown RBP12.46□□□□□ -0.41
HDAC6-206ENST00000426196 TMCO1Q9UM00 188 aa12.46□□□□□ -0.41
HDAC6-206ENST00000426196 SLC25A15Q9Y619 301 aa12.46□□□□□ -0.41
HDAC6-206ENST00000426196 GXYLT2A0PJZ3 443 aa12.45□□□□□ -0.42
HDAC6-206ENST00000426196 TMEM89A2RUT3 159 aa12.45□□□□□ -0.42
HDAC6-206ENST00000426196 CCT8L1PA6NM43 557 aa12.45□□□□□ -0.42
HDAC6-206ENST00000426196 MYO1GB0I1T2 1018 aa12.45□□□□□ -0.42
HDAC6-206ENST00000426196 STX16-NPEPL1H3BU86 382 aa12.45□□□□□ -0.42
HDAC6-206ENST00000426196 UPK1AO00322 258 aa12.45□□□□□ -0.42
HDAC6-206ENST00000426196 STX16O14662 325 aa12.45□□□□□ -0.42
HDAC6-206ENST00000426196 KLHL2O95198 593 aa12.45□□□□□ -0.42
HDAC6-206ENST00000426196 GSTA2P09210 222 aa12.45□□□□□ -0.42
HDAC6-206ENST00000426196 LINGO3P0C6S8 592 aa12.45□□□□□ -0.42
HDAC6-206ENST00000426196 HSD3B1P14060 373 aa12.45□□□□□ -0.42
HDAC6-206ENST00000426196 ENPP1P22413 925 aa12.45□□□□□ -0.42
HDAC6-206ENST00000426196 HSD3B2P26439 372 aa12.45□□□□□ -0.42
HDAC6-206ENST00000426196 SLC7A1P30825 629 aa12.45□□□□□ -0.42
HDAC6-206ENST00000426196 NTSP30990 170 aa12.45□□□□□ -0.42
HDAC6-206ENST00000426196 CHN2P52757 468 aa12.45□□□□□ -0.42
HDAC6-206ENST00000426196 SNRPD2P62316 118 aaKnown RBP12.45□□□□□ -0.42
HDAC6-206ENST00000426196 PHC1P78364 1004 aa12.45□□□□□ -0.42
HDAC6-206ENST00000426196 DEFA6Q01524 100 aa12.45□□□□□ -0.42
HDAC6-206ENST00000426196 RASGEF1BQ0VAM2 473 aa12.45□□□□□ -0.42
HDAC6-206ENST00000426196 PRR31Q5SQ13 230 aa12.45□□□□□ -0.42
HDAC6-206ENST00000426196 LETMD1Q6P1Q0 360 aa12.45□□□□□ -0.42
HDAC6-206ENST00000426196 GALNT5Q7Z7M9 940 aa12.45□□□□□ -0.42
HDAC6-206ENST00000426196 MMGT1Q8N4V1 131 aa12.45□□□□□ -0.42
HDAC6-206ENST00000426196 B4GALNT2Q8NHY0 566 aa12.45□□□□□ -0.42
HDAC6-206ENST00000426196 GPR151Q8TDV0 419 aa12.45□□□□□ -0.42
HDAC6-206ENST00000426196 C16orf78Q8WTQ4 265 aa12.45□□□□□ -0.42
HDAC6-206ENST00000426196 PIK3R3Q92569 461 aa12.45□□□□□ -0.42
HDAC6-206ENST00000426196 HPS1Q92902 700 aa12.45□□□□□ -0.42
HDAC6-206ENST00000426196 METTL17Q9H7H0 456 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-206ENST00000426196 COQ10BQ9H8M1 238 aa12.45□□□□□ -0.42
HDAC6-206ENST00000426196 PPP2R2CQ9Y2T4 447 aa12.45□□□□□ -0.42
HDAC6-206ENST00000426196 LRP5LA4QPB2 252 aa12.44□□□□□ -0.42
HDAC6-206ENST00000426196 ZNF724A8MTY0 619 aa12.44□□□□□ -0.42
HDAC6-206ENST00000426196 C9JVG2 144 aa12.44□□□□□ -0.42
HDAC6-206ENST00000426196 EIF3HO15372 352 aaKnown RBP eCLIP12.44□□□□□ -0.42
HDAC6-206ENST00000426196 EDNRAP25101 427 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms