RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 SLC2A7Q6PXP3 512 aa20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 CBLN3Q6UW01 205 aa20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 PLXDC2Q6UX71 529 aa20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 LIX1LQ8IVB5 337 aa20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 MEIOBQ8N635 442 aa20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 TMCO5AQ8N6Q1 288 aa20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 MBD3L2Q8NHZ7 208 aaPredicted RBP20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 ZFP90Q8TF47 636 aa20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 STON2Q8WXE9 905 aa20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 ZBTB8AQ96BR9 441 aa20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 CALHM2Q9HA72 323 aa20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 KCNJ16Q9NPI9 418 aa20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 POLE3Q9NRF9 147 aa20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 CCDC167Q9P0B6 97 aa20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 LINC01387J3KSC0 135 aa20.16■□□□□ 0.82
PTCHD3P2-201ENST00000424937 HNRNPRO43390 633 aaKnown RBP20.16■□□□□ 0.82
PTCHD3P2-201ENST00000424937 UBL4AP11441 157 aa20.16■□□□□ 0.82
PTCHD3P2-201ENST00000424937 COX6B1P14854 86 aa20.16■□□□□ 0.82
PTCHD3P2-201ENST00000424937 CEACAM8P31997 349 aaPredicted RBP20.16■□□□□ 0.82
PTCHD3P2-201ENST00000424937 ATP4BP51164 291 aa20.16■□□□□ 0.82
PTCHD3P2-201ENST00000424937 P2RX1P51575 399 aa20.16■□□□□ 0.82
PTCHD3P2-201ENST00000424937 TXNL4AP83876 142 aaKnown RBP20.16■□□□□ 0.82
PTCHD3P2-201ENST00000424937 ZNF141Q15928 474 aa20.16■□□□□ 0.82
PTCHD3P2-201ENST00000424937 TMEM44Q2T9K0 475 aa20.16■□□□□ 0.82
PTCHD3P2-201ENST00000424937 TYW3Q6IPR3 259 aaKnown RBP20.16■□□□□ 0.82
PTCHD3P2-201ENST00000424937 FRRS1Q6ZNA5 592 aa20.16■□□□□ 0.82
PTCHD3P2-201ENST00000424937 FUNDC1Q8IVP5 155 aa20.16■□□□□ 0.82
PTCHD3P2-201ENST00000424937 C9orf106Q8NAJ2 232 aa20.16■□□□□ 0.82
PTCHD3P2-201ENST00000424937 GTF2H4Q92759 462 aa20.16■□□□□ 0.82
PTCHD3P2-201ENST00000424937 MARVELD3Q96A59 401 aa20.16■□□□□ 0.82
PTCHD3P2-201ENST00000424937 NPAS1Q99742 590 aa20.16■□□□□ 0.82
PTCHD3P2-201ENST00000424937 SIKE1Q9BRV8 207 aa20.16■□□□□ 0.82
PTCHD3P2-201ENST00000424937 MED4Q9NPJ6 270 aa20.16■□□□□ 0.82
PTCHD3P2-201ENST00000424937 KCNE5Q9UJ90 142 aa20.16■□□□□ 0.82
PTCHD3P2-201ENST00000424937 CENPEQ02224 2701 aa20.15■□□□□ 0.82
PTCHD3P2-201ENST00000424937 A0A0G2JND7 137 aa20.15■□□□□ 0.82
PTCHD3P2-201ENST00000424937 PRAMEF27A3QJZ7 478 aa20.15■□□□□ 0.82
PTCHD3P2-201ENST00000424937 SERINC4A6NH21 518 aa20.15■□□□□ 0.82
PTCHD3P2-201ENST00000424937 UGT2B17O75795 530 aa20.15■□□□□ 0.82
PTCHD3P2-201ENST00000424937 H6PDO95479 791 aa20.15■□□□□ 0.82
PTCHD3P2-201ENST00000424937 ZCCHC18P0CG32 403 aa20.15■□□□□ 0.82
PTCHD3P2-201ENST00000424937 NCF2P19878 526 aaPredicted RBP20.15■□□□□ 0.82
PTCHD3P2-201ENST00000424937 CCR4P51679 360 aa20.15■□□□□ 0.82
PTCHD3P2-201ENST00000424937 SUMO3P55854 103 aaPredicted RBP20.15■□□□□ 0.82
PTCHD3P2-201ENST00000424937 CHMP1BQ7LBR1 199 aa20.15■□□□□ 0.82
PTCHD3P2-201ENST00000424937 ADGRE4PQ86SQ3 457 aa20.15■□□□□ 0.82
PTCHD3P2-201ENST00000424937 GRAMD2AQ8IUY3 354 aa20.15■□□□□ 0.82
PTCHD3P2-201ENST00000424937 ZNF619Q8N2I2 560 aa20.15■□□□□ 0.82
PTCHD3P2-201ENST00000424937 GTPBP8Q8N3Z3 284 aaPredicted RBP20.15■□□□□ 0.82
PTCHD3P2-201ENST00000424937 SPDL1Q96EA4 605 aa20.15■□□□□ 0.82
PTCHD3P2-201ENST00000424937 AURKBQ96GD4 344 aaPredicted RBP20.15■□□□□ 0.82
PTCHD3P2-201ENST00000424937 RNF145Q96MT1 663 aa20.15■□□□□ 0.82
PTCHD3P2-201ENST00000424937 TPT1P8Q9HAU6 139 aa20.15■□□□□ 0.82
PTCHD3P2-201ENST00000424937 CLCF1Q9UBD9 225 aa20.15■□□□□ 0.82
PTCHD3P2-201ENST00000424937 ICAM5Q9UMF0 924 aa20.15■□□□□ 0.82
PTCHD3P2-201ENST00000424937 L3MBTL1Q9Y468 752 aa20.15■□□□□ 0.82
PTCHD3P2-201ENST00000424937 AP4B1Q9Y6B7 739 aa20.15■□□□□ 0.82
PTCHD3P2-201ENST00000424937 H0YC42 278 aa20.14■□□□□ 0.81
PTCHD3P2-201ENST00000424937 ZNF264O43296 627 aa20.14■□□□□ 0.81
PTCHD3P2-201ENST00000424937 CYP7B1O75881 506 aa20.14■□□□□ 0.81
PTCHD3P2-201ENST00000424937 BMP5P22003 454 aa20.14■□□□□ 0.81
PTCHD3P2-201ENST00000424937 CRATP43155 626 aa20.14■□□□□ 0.81
PTCHD3P2-201ENST00000424937 ZNF136P52737 540 aa20.14■□□□□ 0.81
PTCHD3P2-201ENST00000424937 TPD52P55327 224 aaPredicted RBP20.14■□□□□ 0.81
PTCHD3P2-201ENST00000424937 CLDN20P56880 219 aa20.14■□□□□ 0.81
PTCHD3P2-201ENST00000424937 IRX1P78414 480 aaPredicted RBP20.14■□□□□ 0.81
PTCHD3P2-201ENST00000424937 TFF3Q07654 80 aa20.14■□□□□ 0.81
PTCHD3P2-201ENST00000424937 FOXF1Q12946 379 aa20.14■□□□□ 0.81
PTCHD3P2-201ENST00000424937 SYPL1Q16563 259 aa20.14■□□□□ 0.81
PTCHD3P2-201ENST00000424937 SLC25A35Q3KQZ1 300 aa20.14■□□□□ 0.81
PTCHD3P2-201ENST00000424937 AGKQ53H12 422 aa20.14■□□□□ 0.81
PTCHD3P2-201ENST00000424937 BLOC1S3Q6QNY0 202 aa20.14■□□□□ 0.81
PTCHD3P2-201ENST00000424937 HMGN2P46Q86SG4 172 aa20.14■□□□□ 0.81
PTCHD3P2-201ENST00000424937 ANKFN1Q8N957 763 aa20.14■□□□□ 0.81
PTCHD3P2-201ENST00000424937 LIPT1Q9Y234 373 aa20.14■□□□□ 0.81
PTCHD3P2-201ENST00000424937 C7orf72A4D263 438 aa20.13■□□□□ 0.81
PTCHD3P2-201ENST00000424937 DVL2O14641 736 aa20.13■□□□□ 0.81
PTCHD3P2-201ENST00000424937 EIF4E2O60573 245 aaKnown RBP20.13■□□□□ 0.81
PTCHD3P2-201ENST00000424937 CSTAP01040 98 aa20.13■□□□□ 0.81
PTCHD3P2-201ENST00000424937 CHRM4P08173 479 aa20.13■□□□□ 0.81
PTCHD3P2-201ENST00000424937 GUSBP08236 651 aa20.13■□□□□ 0.81
PTCHD3P2-201ENST00000424937 LINGO3P0C6S8 592 aa20.13■□□□□ 0.81
PTCHD3P2-201ENST00000424937 NR2F1P10589 423 aa20.13■□□□□ 0.81
PTCHD3P2-201ENST00000424937 ETFAP13804 333 aa20.13■□□□□ 0.81
PTCHD3P2-201ENST00000424937 CAPN3P20807 821 aa20.13■□□□□ 0.81
PTCHD3P2-201ENST00000424937 SUCLG1P53597 346 aaKnown RBP20.13■□□□□ 0.81
PTCHD3P2-201ENST00000424937 MVDP53602 400 aa20.13■□□□□ 0.81
PTCHD3P2-201ENST00000424937 CLDN15P56746 228 aa20.13■□□□□ 0.81
PTCHD3P2-201ENST00000424937 EEFSECP57772 596 aaKnown RBP20.13■□□□□ 0.81
PTCHD3P2-201ENST00000424937 CHRNEQ04844 493 aa20.13■□□□□ 0.81
PTCHD3P2-201ENST00000424937 MAPK14Q16539 360 aa20.13■□□□□ 0.81
PTCHD3P2-201ENST00000424937 P4HA3Q7Z4N8 544 aa20.13■□□□□ 0.81
PTCHD3P2-201ENST00000424937 RELL2Q8NC24 303 aaPredicted RBP20.13■□□□□ 0.81
PTCHD3P2-201ENST00000424937 TOR1AIP2Q8NFQ8 470 aa20.13■□□□□ 0.81
PTCHD3P2-201ENST00000424937 POC1BQ8TC44 478 aa20.13■□□□□ 0.81
PTCHD3P2-201ENST00000424937 WNT2BQ93097 391 aa20.13■□□□□ 0.81
PTCHD3P2-201ENST00000424937 TRNT1Q96Q11 434 aaKnown RBP20.13■□□□□ 0.81
PTCHD3P2-201ENST00000424937 TM9SF2Q99805 663 aa20.13■□□□□ 0.81
PTCHD3P2-201ENST00000424937 PAIP1Q9H074 479 aaKnown RBP20.13■□□□□ 0.81
PTCHD3P2-201ENST00000424937 SAP130Q9H0E3 1048 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms