RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 FSHBP01225 129 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 ANXA2P07355 339 aaKnown RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 MYL2P10916 166 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 GIFP27352 417 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 APOBEC3AP31941 199 aaPredicted RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 TALDO1P37837 337 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 ST13P50502 369 aaKnown RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 METAP1P53582 386 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 RAB8AP61006 207 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 FUT7Q11130 342 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 LSAMPQ13449 338 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 CYLC2Q14093 348 aaPredicted RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 SFXN4Q6P4A7 337 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 LCLAT1Q6UWP7 414 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 ZNF550Q7Z398 422 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 MDGA2Q7Z553 956 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 DPPA2Q7Z7J5 298 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 NLRP14Q86W24 1093 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 SFRP1Q8N474 314 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 TSEN2Q8NCE0 465 aaKnown RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 OR4K2Q8NGD2 314 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 OR6Y1Q8NGX8 325 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 SPTSSAQ969W0 71 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 FAM162AQ96A26 154 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 TMEM68Q96MH6 324 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 CYTH2Q99418 400 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 DNTTIP1Q9H147 329 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 RASSF1Q9NS23 344 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 NDE1Q9NXR1 346 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 IL37Q9NZH6 218 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 GIMAP2Q9UG22 337 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 CCL26Q9Y258 94 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 PCDHGA11Q9Y5H2 935 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 SPO11Q9Y5K1 396 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 RGS13O14921 159 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 MRPS14O60783 128 aaKnown RBP3.28□□□□□ -1.88
TOP2A-201ENST00000423485 CLEC3BP05452 202 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 DBTP11182 482 aaKnown RBP3.28□□□□□ -1.88
TOP2A-201ENST00000423485 CCL4P13236 92 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 ETFAP13804 333 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 NAGAP17050 411 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 GRIA3P42263 894 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 NCBP2P52298 156 aaKnown RBP eCLIP3.28□□□□□ -1.88
TOP2A-201ENST00000423485 PRKAA2P54646 552 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 HBA1P69905 142 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 POU6F2P78424 691 aaPredicted RBP3.28□□□□□ -1.88
TOP2A-201ENST00000423485 IFI35P80217 286 aaPredicted RBP3.28□□□□□ -1.88
TOP2A-201ENST00000423485 DLG1Q12959 904 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 CCNIQ14094 377 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 CYP1B1Q16678 543 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 RBPMS2Q6ZRY4 209 aaKnown RBP3.28□□□□□ -1.88
TOP2A-201ENST00000423485 CHERPQ8IWX8 916 aaKnown RBP3.28□□□□□ -1.88
TOP2A-201ENST00000423485 DAW1Q8N136 415 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 FAM86B1Q8N7N1 296 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 OR52E2Q8NGJ4 325 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 STAG3L4Q8TBR4 150 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 SLC37A2Q8TED4 501 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 CORO2AQ92828 525 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 TANKQ92844 425 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 SLC6A7Q99884 636 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 ZNF358Q9NW07 568 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 GRHL1Q9NZI5 618 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 FBXO5Q9UKT4 447 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 SCN2AQ99250 2005 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 DNAH7Q8WXX0 4024 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 ZCWPW2A0A1B0GU75 182 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 ZNF860A6NHJ4 632 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 PSCAO43653 123 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 CST8O60676 142 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 FKBP6O75344 327 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 PRKD3O94806 890 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 CD3GP09693 182 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 SNHG28P0DPA3 235 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 PFKFB1P16118 471 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 PTAFRP25105 342 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 HOXC8P31273 242 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 GABRA5P31644 462 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 DSTNP60981 165 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 CTAG1AP78358 180 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 RPE65Q16518 533 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 PCGF3Q3KNV8 242 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 KRT71Q3SY84 523 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 DEFB134Q4QY38 66 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 FBXO42Q6P3S6 717 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 CDHR3Q6ZTQ4 885 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 CLEC20AQ6ZU45 233 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 VSIG1Q86XK7 387 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 VRK2Q86Y07 508 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 C15orf53Q8NAA6 179 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 SDR9C7Q8NEX9 313 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 OR5AR1Q8NGP9 310 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 ZNF473Q8WTR7 871 aaKnown RBP3.28□□□□□ -1.88
TOP2A-201ENST00000423485 STK32AQ8WU08 396 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 R3HDM4Q96D70 268 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 PLPPR2Q96GM1 343 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 SPOCK3Q9BQ16 436 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 ECSITQ9BQ95 431 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 NUDT22Q9BRQ3 303 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 MUC13Q9H3R2 512 aa3.28□□□□□ -1.88
TOP2A-201ENST00000423485 C7orf69Q9H7B7 122 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms