RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 COL4A4P53420 1690 aaPredicted RBP13.58□□□□□ -0.23
CHRD-204ENST00000420973 PRSS47A8MTI9 375 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 PRR23D1E9PI22 279 aaPredicted RBP13.58□□□□□ -0.24
CHRD-204ENST00000420973 NDUFS4O43181 175 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 PRR23D2P0DMB1 279 aaPredicted RBP13.58□□□□□ -0.24
CHRD-204ENST00000420973 C4BPBP20851 252 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 PAICSP22234 425 aaKnown RBP13.58□□□□□ -0.24
CHRD-204ENST00000420973 OPCMLQ14982 345 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 VMACQ2NL98 169 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.58□□□□□ -0.245e-6■□□□□ 10.6
CHRD-204ENST00000420973 COQ5Q5HYK3 327 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 C3orf33Q6P1S2 294 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 USP53Q70EK8 1073 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 CBLN2Q8IUK8 224 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 ZNF614Q8N883 585 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 OR2L2Q8NH16 312 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 GTF3AQ92664 365 aaKnown RBP13.58□□□□□ -0.24
CHRD-204ENST00000420973 PYURFQ96I23 114 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 BBS4Q96RK4 519 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 JAM3Q9BX67 310 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 TPSD1Q9BZJ3 242 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 EVA1AQ9H8M9 152 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 DMRT3Q9NQL9 472 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 NFKBIL1Q9UBC1 381 aaPredicted RBP13.58□□□□□ -0.24
CHRD-204ENST00000420973 GPR160Q9UJ42 338 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 LAMP5Q9UJQ1 280 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 COL6A3P12111 3177 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 DBX1A6NMT0 343 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 L7N2F9 121 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 SULT1C2O00338 296 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 NARSO43776 548 aaKnown RBP13.58□□□□□ -0.24
CHRD-204ENST00000420973 SCELO95171 688 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 MBP02144 154 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 S100A8P05109 93 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 CXCL3P19876 107 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 IDSP22304 550 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 KDELR2P33947 212 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 PSMD4P55036 377 aaKnown RBP13.58□□□□□ -0.24
CHRD-204ENST00000420973 SPIBQ01892 262 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 ST3GAL4Q11206 333 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 SNTB1Q13884 538 aaKnown RBP13.58□□□□□ -0.24
CHRD-204ENST00000420973 TMEM196Q5HYL7 178 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 PABPC1L2AQ5JQF8 200 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 AGBL4Q5VU57 503 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 ZNF776Q68DI1 518 aaPredicted RBP13.58□□□□□ -0.24
CHRD-204ENST00000420973 SHQ1Q6PI26 577 aaKnown RBP13.58□□□□□ -0.24
CHRD-204ENST00000420973 OR4N5Q8IXE1 308 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 LCN9Q8WX39 176 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 ELMOD3Q96FG2 381 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 EFCAB11Q9BUY7 163 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 SLC6A16Q9GZN6 736 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 FGF22Q9HCT0 170 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 ZFP64Q9NPA5 681 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 VNN3Q9NY84 501 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 KIF25Q9UIL4 384 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 SLC16A5O15375 505 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 SLC16A6O15403 523 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 SLC43A1O75387 559 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 POU3F2P20265 443 aaPredicted RBP13.58□□□□□ -0.24
CHRD-204ENST00000420973 ABHD18Q0P651 414 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 COTL1Q14019 142 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 SLC5A12Q1EHB4 618 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 KLHL36Q8N4N3 616 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 RPLP0P6Q8NHW5 317 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 C16orf78Q8WTQ4 265 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 RELTQ969Z4 430 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 KCNC2Q96PR1 638 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 NUDT15Q9NV35 164 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 NKIRAS2Q9NYR9 191 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 TAS2R3Q9NYW6 316 aa13.58□□□□□ -0.24
CHRD-204ENST00000420973 A0A1B0GWJ7 208 aa13.57□□□□□ -0.24
CHRD-204ENST00000420973 RHPN2P1A8MT19 583 aa13.57□□□□□ -0.24
CHRD-204ENST00000420973 FAM227AF5H4B4 570 aa13.57□□□□□ -0.24
CHRD-204ENST00000420973 J3KTA2 159 aa13.57□□□□□ -0.24
CHRD-204ENST00000420973 CLN5O75503 358 aa13.57□□□□□ -0.24
CHRD-204ENST00000420973 BCHEP06276 602 aa13.57□□□□□ -0.24
CHRD-204ENST00000420973 TYRP1P17643 537 aa13.57□□□□□ -0.24
CHRD-204ENST00000420973 ELP2Q6IA86 826 aa13.57□□□□□ -0.24
CHRD-204ENST00000420973 DEF8Q6ZN54 512 aa13.57□□□□□ -0.24
CHRD-204ENST00000420973 NRSN1Q8IZ57 195 aa13.57□□□□□ -0.24
CHRD-204ENST00000420973 RAB42Q8N4Z0 105 aa13.57□□□□□ -0.24
CHRD-204ENST00000420973 BVESQ8NE79 360 aa13.57□□□□□ -0.24
CHRD-204ENST00000420973 OR56A3Q8NH54 315 aa13.57□□□□□ -0.24
CHRD-204ENST00000420973 CXorf40BQ96DE9 158 aa13.57□□□□□ -0.24
CHRD-204ENST00000420973 ZNF514Q96K75 400 aaPredicted RBP13.57□□□□□ -0.24
CHRD-204ENST00000420973 TEX10Q9NXF1 929 aaPredicted RBP13.57□□□□□ -0.24
CHRD-204ENST00000420973 A0A075B6Q4 140 aa13.57□□□□□ -0.24
CHRD-204ENST00000420973 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.57□□□□□ -0.24
CHRD-204ENST00000420973 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.57□□□□□ -0.24
CHRD-204ENST00000420973 GTPBP1O00178 669 aaKnown RBP13.57□□□□□ -0.24
CHRD-204ENST00000420973 NPC1O15118 1278 aa13.57□□□□□ -0.24
CHRD-204ENST00000420973 LCMT2O60294 686 aaKnown RBP13.57□□□□□ -0.24
CHRD-204ENST00000420973 PRF1P14222 555 aa13.57□□□□□ -0.24
CHRD-204ENST00000420973 PTGFRP43088 359 aa13.57□□□□□ -0.24
CHRD-204ENST00000420973 CXCR4P61073 352 aa13.57□□□□□ -0.24
CHRD-204ENST00000420973 ZNF605Q86T29 641 aa13.57□□□□□ -0.24
CHRD-204ENST00000420973 GHDCQ8N2G8 530 aa13.57□□□□□ -0.24
CHRD-204ENST00000420973 OR5M11Q96RB7 305 aa13.57□□□□□ -0.24
CHRD-204ENST00000420973 KCNK12Q9HB15 430 aa13.57□□□□□ -0.24
CHRD-204ENST00000420973 MED11Q9P086 117 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms