RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 TMEM201Q5SNT2 666 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 TEX35Q5T0J7 233 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 C11orf71Q6IPW1 123 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 SLC16A11Q8NCK7 471 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 ELOA3Q8NG57 546 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 KISS1RQ969F8 398 aaPredicted RBP12.6□□□□□ -0.39
NFE4-201ENST00000420058 C16orf58Q96GQ5 468 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 HS6ST2Q96MM7 605 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 RHNO1Q9BSD3 238 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 CDC42EP4Q9H3Q1 356 aaKnown RBP12.6□□□□□ -0.39
NFE4-201ENST00000420058 CXorf36Q9H7Y0 433 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 COQ10BQ9H8M1 238 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 BARX1Q9HBU1 254 aaPredicted RBP12.6□□□□□ -0.39
NFE4-201ENST00000420058 GP6Q9HCN6 339 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 TNFRSF12AQ9NP84 129 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 NGBQ9NPG2 151 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 EQTNQ9NQ60 294 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 TMEM160Q9NX00 188 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 ZNF180Q9UJW8 692 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 CDC42EP3Q9UKI2 254 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 NFU1Q9UMS0 254 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 WBP11Q9Y2W2 641 aaKnown RBP12.6□□□□□ -0.39
NFE4-201ENST00000420058 POLR3HQ9Y535 204 aaPredicted RBP12.6□□□□□ -0.39
NFE4-201ENST00000420058 SNX8Q9Y5X2 465 aa12.6□□□□□ -0.39
NFE4-201ENST00000420058 ZNF195O14628 629 aa12.59□□□□□ -0.39
NFE4-201ENST00000420058 PRKD3O94806 890 aa12.59□□□□□ -0.39
NFE4-201ENST00000420058 ENO1P06733 434 aaKnown RBP12.59□□□□□ -0.39
NFE4-201ENST00000420058 PABPC4LP0CB38 370 aaKnown RBP12.59□□□□□ -0.39
NFE4-201ENST00000420058 GCAP28676 217 aa12.59□□□□□ -0.39
NFE4-201ENST00000420058 PKNOX1P55347 436 aa12.59□□□□□ -0.39
NFE4-201ENST00000420058 FOXF1Q12946 379 aa12.59□□□□□ -0.39
NFE4-201ENST00000420058 LCP2Q13094 533 aa12.59□□□□□ -0.39
NFE4-201ENST00000420058 RNPS1Q15287 305 aaKnown RBP12.59□□□□□ -0.39
NFE4-201ENST00000420058 TOMM34Q15785 309 aaPredicted RBP12.59□□□□□ -0.39
NFE4-201ENST00000420058 DUSP5Q16690 384 aa12.59□□□□□ -0.39
NFE4-201ENST00000420058 ZNF385BQ569K4 471 aa12.59□□□□□ -0.39
NFE4-201ENST00000420058 SPDYAQ5MJ70 313 aa12.59□□□□□ -0.39
NFE4-201ENST00000420058 PDSS1Q5T2R2 415 aa12.59□□□□□ -0.39
NFE4-201ENST00000420058 NOXRED1Q6NXP6 359 aa12.59□□□□□ -0.39
NFE4-201ENST00000420058 CBLN3Q6UW01 205 aa12.59□□□□□ -0.39
NFE4-201ENST00000420058 TIFABQ6ZNK6 161 aa12.59□□□□□ -0.39
NFE4-201ENST00000420058 FCRLAQ7L513 359 aa12.59□□□□□ -0.39
NFE4-201ENST00000420058 BHLHA15Q7RTS1 189 aaPredicted RBP12.59□□□□□ -0.39
NFE4-201ENST00000420058 ZNF572Q7Z3I7 529 aaPredicted RBP12.59□□□□□ -0.39
NFE4-201ENST00000420058 TRIM46Q7Z4K8 759 aa12.59□□□□□ -0.39
NFE4-201ENST00000420058 TDRPQ86YL5 185 aa12.59□□□□□ -0.39
NFE4-201ENST00000420058 ARIH2OSQ8N7S6 290 aa12.59□□□□□ -0.39
NFE4-201ENST00000420058 BANPQ8N9N5 519 aa12.59□□□□□ -0.39
NFE4-201ENST00000420058 CDC26Q8NHZ8 85 aa12.59□□□□□ -0.39
NFE4-201ENST00000420058 ZNF75CPQ92670 426 aaPredicted RBP12.59□□□□□ -0.39
NFE4-201ENST00000420058 L3HYPDHQ96EM0 354 aa12.59□□□□□ -0.39
NFE4-201ENST00000420058 POTEKPQ9BYX7 375 aa12.59□□□□□ -0.39
NFE4-201ENST00000420058 GSTO2Q9H4Y5 243 aa12.59□□□□□ -0.39
NFE4-201ENST00000420058 MIEF1Q9NQG6 463 aa12.59□□□□□ -0.39
NFE4-201ENST00000420058 PRSS50Q9UI38 385 aa12.59□□□□□ -0.39
NFE4-201ENST00000420058 A0A1W2PQD3 144 aa12.58□□□□□ -0.4
NFE4-201ENST00000420058 E7EQL1 145 aa12.58□□□□□ -0.4
NFE4-201ENST00000420058 POC1B-GALNT4F8VUJ3 575 aa12.58□□□□□ -0.4
NFE4-201ENST00000420058 PGM3O95394 542 aa12.58□□□□□ -0.4
NFE4-201ENST00000420058 ME2P23368 584 aa12.58□□□□□ -0.4
NFE4-201ENST00000420058 ATP5F1P24539 256 aaPredicted RBP12.58□□□□□ -0.4
NFE4-201ENST00000420058 NTSP30990 170 aa12.58□□□□□ -0.4
NFE4-201ENST00000420058 THBS2P35442 1172 aa12.58□□□□□ -0.4
NFE4-201ENST00000420058 OR3A2P47893 321 aa12.58□□□□□ -0.4
NFE4-201ENST00000420058 ZNF41P51814 821 aaPredicted RBP12.58□□□□□ -0.4
NFE4-201ENST00000420058 TMEM176BQ3YBM2 270 aaPredicted RBP12.58□□□□□ -0.4
NFE4-201ENST00000420058 CCNJQ5T5M9 372 aa12.58□□□□□ -0.4
NFE4-201ENST00000420058 ANKRD26P1Q6NSI1 321 aa12.58□□□□□ -0.4
NFE4-201ENST00000420058 Q6ZSR9 355 aa12.58□□□□□ -0.4
NFE4-201ENST00000420058 Q6ZT83 130 aa12.58□□□□□ -0.4
NFE4-201ENST00000420058 CDRT4Q8N9R6 151 aa12.58□□□□□ -0.4
NFE4-201ENST00000420058 B4GALNT2Q8NHY0 566 aa12.58□□□□□ -0.4
NFE4-201ENST00000420058 FBXO27Q8NI29 283 aa12.58□□□□□ -0.4
NFE4-201ENST00000420058 FAM76AQ8TAV0 307 aa12.58□□□□□ -0.4
NFE4-201ENST00000420058 FBXO30Q8TB52 745 aa12.58□□□□□ -0.4
NFE4-201ENST00000420058 HTRA1Q92743 480 aa12.58□□□□□ -0.4
NFE4-201ENST00000420058 CPNE4Q96A23 557 aaPredicted RBP12.58□□□□□ -0.4
NFE4-201ENST00000420058 CIDECQ96AQ7 238 aaPredicted RBP12.58□□□□□ -0.4
NFE4-201ENST00000420058 USB1Q9BQ65 265 aaKnown RBP12.58□□□□□ -0.4
NFE4-201ENST00000420058 PSD2Q9BQI7 771 aa12.58□□□□□ -0.4
NFE4-201ENST00000420058 BCO1Q9HAY6 547 aa12.58□□□□□ -0.4
NFE4-201ENST00000420058 UBQLN4Q9NRR5 601 aa12.58□□□□□ -0.4
NFE4-201ENST00000420058 IGHV3-15A0A0B4J1V0 119 aa12.57□□□□□ -0.4
NFE4-201ENST00000420058 C9JVG2 144 aa12.57□□□□□ -0.4
NFE4-201ENST00000420058 LYZL6O75951 148 aa12.57□□□□□ -0.4
NFE4-201ENST00000420058 SNRPAP09012 282 aaKnown RBP12.57□□□□□ -0.4
NFE4-201ENST00000420058 TAC1P20366 129 aa12.57□□□□□ -0.4
NFE4-201ENST00000420058 IGHV1-2P23083 117 aa12.57□□□□□ -0.4
NFE4-201ENST00000420058 TTKP33981 857 aa12.57□□□□□ -0.4
NFE4-201ENST00000420058 EIF1P41567 113 aaKnown RBP12.57□□□□□ -0.4
NFE4-201ENST00000420058 FRKP42685 505 aaPredicted RBP12.57□□□□□ -0.4
NFE4-201ENST00000420058 PRKAG1P54619 331 aa12.57□□□□□ -0.4
NFE4-201ENST00000420058 ZNF117Q03924 483 aa12.57□□□□□ -0.4
NFE4-201ENST00000420058 HSPB3Q12988 150 aa12.57□□□□□ -0.4
NFE4-201ENST00000420058 PPA1Q15181 289 aa12.57□□□□□ -0.4
NFE4-201ENST00000420058 IKBIPQ70UQ0 350 aa12.57□□□□□ -0.4
NFE4-201ENST00000420058 NUP43Q8NFH3 380 aa12.57□□□□□ -0.4
NFE4-201ENST00000420058 OR6Y1Q8NGX8 325 aa12.57□□□□□ -0.4
NFE4-201ENST00000420058 ZNF775Q96BV0 537 aaPredicted RBP12.57□□□□□ -0.4
NFE4-201ENST00000420058 OTUB1Q96FW1 271 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms