RNA–Protein interactions for RNA: ENST00000419470.6

SFTPA1-202, Transcript of surfactant protein A1, humanhuman

TSL 1 (best) BASIC

Gene SFTPA1, Length 2,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-202ENST00000419470 MADCAM1Q13477 382 aa12.4□□□□□ -0.42
SFTPA1-202ENST00000419470 GNA13Q14344 377 aa12.4□□□□□ -0.42
SFTPA1-202ENST00000419470 EXOC3L2Q2M3D2 409 aa12.4□□□□□ -0.42
SFTPA1-202ENST00000419470 CD276Q5ZPR3 534 aa12.4□□□□□ -0.42
SFTPA1-202ENST00000419470 OVCH2Q7RTZ1 564 aa12.4□□□□□ -0.42
SFTPA1-202ENST00000419470 PAQR7Q86WK9 346 aa12.4□□□□□ -0.42
SFTPA1-202ENST00000419470 GPR156Q8NFN8 814 aa12.4□□□□□ -0.42
SFTPA1-202ENST00000419470 OR6M1Q8NGM8 313 aa12.4□□□□□ -0.42
SFTPA1-202ENST00000419470 CEP76Q8TAP6 659 aa12.4□□□□□ -0.42
SFTPA1-202ENST00000419470 SPPL2AQ8TCT8 520 aa12.4□□□□□ -0.42
SFTPA1-202ENST00000419470 CIDECQ96AQ7 238 aaPredicted RBP12.4□□□□□ -0.42
SFTPA1-202ENST00000419470 SCMH1Q96GD3 660 aa12.4□□□□□ -0.42
SFTPA1-202ENST00000419470 LINC00052Q96N35 136 aa12.4□□□□□ -0.42
SFTPA1-202ENST00000419470 TSSK3Q96PN8 268 aa12.4□□□□□ -0.42
SFTPA1-202ENST00000419470 DPH2Q9BQC3 489 aaPredicted RBP12.4□□□□□ -0.42
SFTPA1-202ENST00000419470 EBPLQ9BY08 206 aa12.4□□□□□ -0.42
SFTPA1-202ENST00000419470 PRM3Q9NNZ6 103 aa12.4□□□□□ -0.42
SFTPA1-202ENST00000419470 ZSCAN32Q9NX65 697 aa12.4□□□□□ -0.42
SFTPA1-202ENST00000419470 COMMD3Q9UBI1 195 aa12.4□□□□□ -0.42
SFTPA1-202ENST00000419470 PRELID3BQ9Y3B1 194 aa12.4□□□□□ -0.42
SFTPA1-202ENST00000419470 KMT2EQ8IZD2 1858 aa12.4□□□□□ -0.43
SFTPA1-202ENST00000419470 KRBOX1C9JBD0 128 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 SAP18O00422 153 aaKnown RBP12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 SLC30A4O14863 429 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 ENTPD6O75354 484 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 CLEC3AO75596 197 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 C1QCP02747 245 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 GIMD1P0DJR0 217 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 AVPR2P30518 371 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 TIA1P31483 386 aaKnown RBP eCLIP12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 ARRB1P49407 418 aaPredicted RBP12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 CDH12P55289 794 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 PUDPQ08623 228 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 LGALSLQ3ZCW2 172 aaPredicted RBP12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 C14orf28Q4W4Y0 310 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 TMEM201Q5SNT2 666 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 KHDRBS2Q5VWX1 349 aaKnown RBP12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 ZNF57Q68EA5 555 aaPredicted RBP12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 COMMD6Q7Z4G1 85 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 OOSP2Q86WS3 158 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 OR4A15Q8NGL6 344 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 PCNPQ8WW12 178 aaKnown RBP12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 RSC1A1Q92681 617 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 GHITMQ9H3K2 345 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 PCDHB16Q9NRJ7 776 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 SLCO1C1Q9NYB5 712 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 A0A1B0GVI7 797 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 MFSD2BA6NFX1 497 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 LILRA5A6NI73 299 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 TMEM229AB2RXF0 380 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 PTP4A3O75365 173 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 SP9P0CG40 484 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 AHRP35869 848 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 SELENOWP63302 87 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 SLC5A12Q1EHB4 618 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 TUSC1Q2TAM9 212 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 PLA1AQ53H76 456 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 C6orf132Q5T0Z8 1188 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 MS4A15Q8N5U1 240 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 OR9Q2Q8NGE9 314 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 OR52J3Q8NH60 311 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 NXPE2Q96DL1 559 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 USB1Q9BQ65 265 aaKnown RBP12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 PELOQ9BRX2 385 aaKnown RBP12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 REG4Q9BYZ8 158 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 SYNPO2LQ9H987 977 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 MED9Q9NWA0 146 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 SDHAF2Q9NX18 166 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 KCMF1Q9P0J7 381 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 MALT1Q9UDY8 824 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 RP1P56715 2156 aa12.39□□□□□ -0.43
SFTPA1-202ENST00000419470 ZNF98A6NK75 572 aa12.38□□□□□ -0.43
SFTPA1-202ENST00000419470 PLPP1O14494 284 aa12.38□□□□□ -0.43
SFTPA1-202ENST00000419470 AKAP8O43823 692 aaKnown RBP12.38□□□□□ -0.43
SFTPA1-202ENST00000419470 PCDH7O60245 1069 aa12.38□□□□□ -0.43
SFTPA1-202ENST00000419470 HPGDSO60760 199 aa12.38□□□□□ -0.43
SFTPA1-202ENST00000419470 ANXA4P09525 319 aaPredicted RBP12.38□□□□□ -0.43
SFTPA1-202ENST00000419470 TYRP1P17643 537 aa12.38□□□□□ -0.43
SFTPA1-202ENST00000419470 PCGF2P35227 344 aa12.38□□□□□ -0.43
SFTPA1-202ENST00000419470 LSSP48449 732 aa12.38□□□□□ -0.43
SFTPA1-202ENST00000419470 CRISP1P54107 249 aa12.38□□□□□ -0.43
SFTPA1-202ENST00000419470 ZIC1Q15915 447 aa12.38□□□□□ -0.43
SFTPA1-202ENST00000419470 BCL2L15Q5TBC7 163 aa12.38□□□□□ -0.43
SFTPA1-202ENST00000419470 ZNF621Q6ZSS3 439 aa12.38□□□□□ -0.43
SFTPA1-202ENST00000419470 PM20D2Q8IYS1 436 aa12.38□□□□□ -0.43
SFTPA1-202ENST00000419470 TBC1D19Q8N5T2 526 aa12.38□□□□□ -0.43
SFTPA1-202ENST00000419470 MFSD9Q8NBP5 474 aa12.38□□□□□ -0.43
SFTPA1-202ENST00000419470 KCT2Q8NC54 265 aa12.38□□□□□ -0.43
SFTPA1-202ENST00000419470 OR52P1PQ8NH57 321 aa12.38□□□□□ -0.43
SFTPA1-202ENST00000419470 WDR48Q8TAF3 677 aa12.38□□□□□ -0.43
SFTPA1-202ENST00000419470 F2RL3Q96RI0 385 aa12.38□□□□□ -0.43
SFTPA1-202ENST00000419470 DPYSL5Q9BPU6 564 aa12.38□□□□□ -0.43
SFTPA1-202ENST00000419470 WACQ9BTA9 647 aa12.38□□□□□ -0.43
SFTPA1-202ENST00000419470 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.38□□□□□ -0.43
SFTPA1-202ENST00000419470 SERHL2Q9H4I8 314 aa12.38□□□□□ -0.43
SFTPA1-202ENST00000419470 TAS2R7Q9NYW3 318 aa12.38□□□□□ -0.43
SFTPA1-202ENST00000419470 RAB23Q9ULC3 237 aa12.38□□□□□ -0.43
SFTPA1-202ENST00000419470 BAIAP2Q9UQB8 552 aa12.38□□□□□ -0.43
SFTPA1-202ENST00000419470 RPL36Q9Y3U8 105 aaKnown RBP12.38□□□□□ -0.43
SFTPA1-202ENST00000419470 UNC13CQ8NB66 2214 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms