RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 C8orf59Q8N0T1 100 aaPredicted RBP5.49□□□□□ -1.53
HMGB3-202ENST00000419110 MARVELD2Q8N4S9 558 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 SLC5A8Q8N695 610 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 ZNF441Q8N8Z8 693 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 AQP11Q8NBQ7 271 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 APCDD1LQ8NCL9 501 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 FAM71CQ8NEG0 241 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 OR4N2Q8NGD1 307 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 OR9Q2Q8NGE9 314 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 OR4C15Q8NGM1 316 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 OR52J3Q8NH60 311 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 PHOSPHO1Q8TCT1 267 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 ADAMTS16Q8TE57 1224 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 ADIPOR1Q96A54 375 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 TP53INP1Q96A56 240 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 C8orf44Q96CB5 159 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 NXPE2Q96DL1 559 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 SLC41A3Q96GZ6 507 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 IP6K3Q96PC2 410 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 ALPK1Q96QP1 1244 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 NR1H4Q96RI1 486 aaPredicted RBP5.49□□□□□ -1.53
HMGB3-202ENST00000419110 SLC29A1Q99808 456 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 WDR77Q9BQA1 342 aaPredicted RBP5.49□□□□□ -1.53
HMGB3-202ENST00000419110 GPR87Q9BY21 358 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 GABARAPL3Q9BY60 117 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 DEFB126Q9BYW3 111 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 PRRG3Q9BZD7 231 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 TRIM2Q9C040 744 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 NRSN2Q9GZP1 204 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 ZNF700Q9H0M5 742 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 ING2Q9H160 280 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 TOR3AQ9H497 397 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 NMNAT1Q9HAN9 279 aaPredicted RBP5.49□□□□□ -1.53
HMGB3-202ENST00000419110 TMEM27Q9HBJ8 222 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 EXOSC3Q9NQT5 275 aaKnown RBP5.49□□□□□ -1.53
HMGB3-202ENST00000419110 CTPS2Q9NRF8 586 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 PNPLA3Q9NST1 481 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 DNAJB12Q9NXW2 375 aaKnown RBP5.49□□□□□ -1.53
HMGB3-202ENST00000419110 TCFL5Q9UL49 500 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 A4GNTQ9UNA3 340 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 MGAT4BQ9UQ53 548 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 TMEM5Q9Y2B1 443 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 LRRC42Q9Y546 428 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 HS3ST3B1Q9Y662 390 aa5.49□□□□□ -1.53
HMGB3-202ENST00000419110 MYO15AQ9UKN7 3530 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 TRBV4-1A0A0J9YWV2 114 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 A0A1W2PQD3 144 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 SH3PXD2BA1X283 911 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 CDC14CA4D256 554 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 PRAMEF25A6NGN4 478 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 FAM47E-STBD1D6RA91 191 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 GTPBP1O00178 669 aaKnown RBP5.48□□□□□ -1.53
HMGB3-202ENST00000419110 SLC30A4O14863 429 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 DENRO43583 198 aaKnown RBP5.48□□□□□ -1.53
HMGB3-202ENST00000419110 CHP2O43745 196 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 SCO2O43819 266 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 TSPAN2O60636 221 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 KLF7O75840 302 aaPredicted RBP5.48□□□□□ -1.53
HMGB3-202ENST00000419110 CYP7B1O75881 506 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 SNAP29O95721 258 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 EPPINO95925 133 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 TCN2P20062 427 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 GSTM3P21266 225 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 TBXA2RP21731 343 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 CBLP22681 906 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 MYF6P23409 242 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 LIMS1P48059 325 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 RNF144AP50876 292 aaPredicted RBP5.48□□□□□ -1.53
HMGB3-202ENST00000419110 ZNF136P52737 540 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 CHN2P52757 468 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 PNLIPRP2P54317 469 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 SUMO3P55854 103 aaPredicted RBP5.48□□□□□ -1.53
HMGB3-202ENST00000419110 RPS18P62269 152 aaKnown RBP5.48□□□□□ -1.53
HMGB3-202ENST00000419110 ALDH6A1Q02252 535 aaKnown RBP5.48□□□□□ -1.53
HMGB3-202ENST00000419110 PPP1R8Q12972 351 aaKnown RBP5.48□□□□□ -1.53
HMGB3-202ENST00000419110 TARDBPQ13148 414 aaKnown RBP eCLIP5.48□□□□□ -1.53
HMGB3-202ENST00000419110 KCNAB2Q13303 367 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 SKP2Q13309 424 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 KEAP1Q14145 624 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 PDK3Q15120 406 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 MAPK14Q16539 360 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 MICAQ29983 383 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 IQCCQ4KMZ1 466 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 KDM4DQ6B0I6 523 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 NDUFAF7Q7L592 441 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 RRM2BQ7LG56 351 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 PPP1R32Q7Z5V6 425 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 GALNT5Q7Z7M9 940 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 TMEM179BQ7Z7N9 219 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 RBM45Q8IUH3 476 aaKnown RBP5.48□□□□□ -1.53
HMGB3-202ENST00000419110 PARP8Q8N3A8 854 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 CLIP4Q8N3C7 705 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 CADM2Q8N3J6 435 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 IL22RA1Q8N6P7 574 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 GATSQ8NAP1 163 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 NFAM1Q8NET5 270 aaPredicted RBP5.48□□□□□ -1.53
HMGB3-202ENST00000419110 OR11G2Q8NGC1 345 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 OR4K5Q8NGD3 323 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 OR4D11Q8NGI4 311 aa5.48□□□□□ -1.53
HMGB3-202ENST00000419110 TEX47Q8TBZ9 253 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms