RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 DAZ3Q9NR90 486 aaKnown RBP2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 SOHLH2Q9NX45 425 aa2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 MARCH5Q9NX47 278 aa2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 SAMD4AQ9UPU9 718 aaKnown RBP2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 PRG3Q9Y2Y8 225 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 ABCC4O15439 1325 aa2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 UBE4BO95155 1302 aa2.82□□□□□ -1.96
HMGB1P49-201ENST00000418882 IGHV1OR15-1A0A075B7D0 117 aa2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 LOC100131303A0A0U1RQF7 123 aa2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 RNF103-CHMP3A0A140T963 221 aa2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 TRAF3IP2O43734 574 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 TRIM3O75382 744 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 TRIM16O95361 564 aa2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 IGHV3-48P01763 117 aa2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 CHRNA1P02708 482 aa2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 ANXA3P12429 323 aa2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 ETS1P14921 441 aa2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 ADSSP30520 456 aa2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 CYLC1P35663 651 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 MECOMQ03112 1051 aa2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 CHI3L2Q15782 390 aa2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 LRRC36Q1X8D7 754 aa2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 CASC1Q6TDU7 716 aa2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 KDELC1Q6UW63 502 aa2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 LANCL3Q6ZV70 420 aa2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 CCDC71LQ8N9Z2 235 aa2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 FBXO30Q8TB52 745 aa2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 C7orf33Q8WU49 177 aa2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 SAMD8Q96LT4 415 aa2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 TXN2Q99757 166 aa2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 NICN1Q9BSH3 213 aa2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 CRACR2AQ9BSW2 395 aa2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 CHIAQ9BZP6 476 aa2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 ATG10Q9H0Y0 220 aa2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 COG4Q9H9E3 785 aa2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 FANCFQ9NPI8 374 aa2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 YAE1D1Q9NRH1 226 aa2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 HOOK1Q9UJC3 728 aaKnown RBP2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 LAMP5Q9UJQ1 280 aa2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 FOXJ3Q9UPW0 622 aa2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 AURKCQ9UQB9 309 aa2.81□□□□□ -1.96
HMGB1P49-201ENST00000418882 ZNFX1Q9P2E3 1918 aaKnown RBP2.8□□□□□ -1.96
HMGB1P49-201ENST00000418882 FAM74A7A6NL05 159 aa2.8□□□□□ -1.96
HMGB1P49-201ENST00000418882 K7N7A8 449 aa2.8□□□□□ -1.96
HMGB1P49-201ENST00000418882 TBL1XO60907 577 aa2.8□□□□□ -1.96
HMGB1P49-201ENST00000418882 HPNP05981 417 aa2.8□□□□□ -1.96
HMGB1P49-201ENST00000418882 ASNSP08243 561 aa2.8□□□□□ -1.96
HMGB1P49-201ENST00000418882 BCKDHAP12694 445 aa2.8□□□□□ -1.96
HMGB1P49-201ENST00000418882 AQP1P29972 269 aa2.8□□□□□ -1.96
HMGB1P49-201ENST00000418882 HNMTP50135 292 aa2.8□□□□□ -1.96
HMGB1P49-201ENST00000418882 GAMTQ14353 236 aa2.8□□□□□ -1.96
HMGB1P49-201ENST00000418882 ADPRMQ3LIE5 342 aa2.8□□□□□ -1.96
HMGB1P49-201ENST00000418882 FAM74A3Q4VXF1 159 aa2.8□□□□□ -1.96
HMGB1P49-201ENST00000418882 METTL11BQ5VVY1 283 aa2.8□□□□□ -1.96
HMGB1P49-201ENST00000418882 SLC25A24Q6NUK1 477 aa2.8□□□□□ -1.96
HMGB1P49-201ENST00000418882 SKA3Q8IX90 412 aa2.8□□□□□ -1.96
HMGB1P49-201ENST00000418882 MKXQ8IYA7 352 aa2.8□□□□□ -1.96
HMGB1P49-201ENST00000418882 ANKRD20A12PQ8NF67 263 aa2.8□□□□□ -1.96
HMGB1P49-201ENST00000418882 DCUN1D4Q92564 292 aa2.8□□□□□ -1.96
HMGB1P49-201ENST00000418882 FCGR1BQ92637 280 aa2.8□□□□□ -1.96
HMGB1P49-201ENST00000418882 IL22RA2Q969J5 263 aa2.8□□□□□ -1.96
HMGB1P49-201ENST00000418882 FGGYQ96C11 551 aa2.8□□□□□ -1.96
HMGB1P49-201ENST00000418882 DTNBP1Q96EV8 351 aa2.8□□□□□ -1.96
HMGB1P49-201ENST00000418882 ACTR8Q9H981 624 aa2.8□□□□□ -1.96
HMGB1P49-201ENST00000418882 ZNF331Q9NQX6 463 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P49-201ENST00000418882 NANSQ9NR45 359 aa2.8□□□□□ -1.96
HMGB1P49-201ENST00000418882 LCMT1Q9UIC8 334 aa2.8□□□□□ -1.96
HMGB1P49-201ENST00000418882 EIF3LQ9Y262 564 aaKnown RBP2.8□□□□□ -1.96
HMGB1P49-201ENST00000418882 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.8□□□□□ -1.96
HMGB1P49-201ENST00000418882 THSD7BQ9C0I4 1608 aa2.79□□□□□ -1.96
HMGB1P49-201ENST00000418882 CCDC7Q96M83 1385 aa2.79□□□□□ -1.96
HMGB1P49-201ENST00000418882 IGHV7-81A0A0B4J1V7 117 aa2.79□□□□□ -1.96
HMGB1P49-201ENST00000418882 USP27XA6NNY8 438 aa2.79□□□□□ -1.96
HMGB1P49-201ENST00000418882 STX11O75558 287 aa2.79□□□□□ -1.96
HMGB1P49-201ENST00000418882 SUPT7LO94864 414 aa2.79□□□□□ -1.96
HMGB1P49-201ENST00000418882 DIRAS3O95661 229 aa2.79□□□□□ -1.96
HMGB1P49-201ENST00000418882 CA3P07451 260 aa2.79□□□□□ -1.96
HMGB1P49-201ENST00000418882 TPM2P07951 284 aa2.79□□□□□ -1.96
HMGB1P49-201ENST00000418882 CCDC192P0DO97 292 aa2.79□□□□□ -1.96
HMGB1P49-201ENST00000418882 PSG2P11465 335 aa2.79□□□□□ -1.96
HMGB1P49-201ENST00000418882 NCF1P14598 390 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P49-201ENST00000418882 PBLDP30039 288 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P49-201ENST00000418882 GNPDA1P46926 289 aa2.79□□□□□ -1.96
HMGB1P49-201ENST00000418882 DHPSP49366 369 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P49-201ENST00000418882 TLE4Q04727 773 aa2.79□□□□□ -1.96
HMGB1P49-201ENST00000418882 ORC2Q13416 577 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P49-201ENST00000418882 CEBPEQ15744 281 aa2.79□□□□□ -1.96
HMGB1P49-201ENST00000418882 TIGITQ495A1 244 aa2.79□□□□□ -1.96
HMGB1P49-201ENST00000418882 DCST2Q5T1A1 773 aa2.79□□□□□ -1.96
HMGB1P49-201ENST00000418882 VPS36Q86VN1 386 aa2.79□□□□□ -1.96
HMGB1P49-201ENST00000418882 ENTHD1Q8IYW4 607 aa2.79□□□□□ -1.96
HMGB1P49-201ENST00000418882 KDM8Q8N371 416 aa2.79□□□□□ -1.96
HMGB1P49-201ENST00000418882 LINC01555Q8NAE3 123 aa2.79□□□□□ -1.96
HMGB1P49-201ENST00000418882 STKLD1Q8NE28 680 aa2.79□□□□□ -1.96
HMGB1P49-201ENST00000418882 GMCL1P1Q8NEA9 526 aa2.79□□□□□ -1.96
HMGB1P49-201ENST00000418882 FAM71CQ8NEG0 241 aa2.79□□□□□ -1.96
HMGB1P49-201ENST00000418882 NFKBIZQ9BYH8 718 aa2.79□□□□□ -1.96
HMGB1P49-201ENST00000418882 UBQLN1Q9UMX0 589 aaKnown RBP2.79□□□□□ -1.96
HMGB1P49-201ENST00000418882 KDRP35968 1356 aa2.78□□□□□ -1.96
HMGB1P49-201ENST00000418882 A0A0J9YXY3 114 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms