RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 PNPLA2Q96AD5 504 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 ASB9Q96DX5 294 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 SCMH1Q96GD3 660 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 TMEM41AQ96HV5 264 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 DSN1Q9H410 356 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 LDAHQ9H6V9 325 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 EVA1AQ9H8M9 152 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 ZFP64Q9NPA5 681 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 TUBA8Q9NY65 449 aaPredicted RBP7.74□□□□□ -1.17
TRIM48-201ENST00000417545 ACTR3BQ9P1U1 418 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 CD300AQ9UGN4 299 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 CARD8Q9Y2G2 431 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 PCDHGB6Q9Y5F9 930 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 CSAG2Q9Y5P2 127 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 ANKRD33BA6NCL7 494 aa7.73□□□□□ -1.17
TRIM48-201ENST00000417545 K7EM74 188 aa7.73□□□□□ -1.17
TRIM48-201ENST00000417545 CDC40O60508 579 aaKnown RBP eCLIP7.73□□□□□ -1.17
TRIM48-201ENST00000417545 CBR3O75828 277 aa7.73□□□□□ -1.17
TRIM48-201ENST00000417545 ZIC2O95409 532 aaPredicted RBP7.73□□□□□ -1.17
TRIM48-201ENST00000417545 LINGO3P0C6S8 592 aa7.73□□□□□ -1.17
TRIM48-201ENST00000417545 CD247P20963 164 aa7.73□□□□□ -1.17
TRIM48-201ENST00000417545 RPS4Y1P22090 263 aaKnown RBP7.73□□□□□ -1.17
TRIM48-201ENST00000417545 TCEA1P23193 301 aaKnown RBP7.73□□□□□ -1.17
TRIM48-201ENST00000417545 RYKP34925 604 aa7.73□□□□□ -1.17
TRIM48-201ENST00000417545 P2RX1P51575 399 aa7.73□□□□□ -1.17
TRIM48-201ENST00000417545 PCBP3P57721 371 aaKnown RBP7.73□□□□□ -1.17
TRIM48-201ENST00000417545 PPIAP62937 165 aaKnown RBP7.73□□□□□ -1.17
TRIM48-201ENST00000417545 ALDH6A1Q02252 535 aaKnown RBP7.73□□□□□ -1.17
TRIM48-201ENST00000417545 ZNF117Q03924 483 aa7.73□□□□□ -1.17
TRIM48-201ENST00000417545 TRAP1Q12931 704 aaKnown RBP7.73□□□□□ -1.17
TRIM48-201ENST00000417545 ELOAQ14241 798 aaKnown RBP7.73□□□□□ -1.17
TRIM48-201ENST00000417545 MAPK11Q15759 364 aa7.73□□□□□ -1.17
TRIM48-201ENST00000417545 CD226Q15762 336 aa7.73□□□□□ -1.17
TRIM48-201ENST00000417545 MAPK14Q16539 360 aa7.73□□□□□ -1.17
TRIM48-201ENST00000417545 NDUFAF6Q330K2 333 aa7.73□□□□□ -1.17
TRIM48-201ENST00000417545 IFI44LQ53G44 452 aa7.73□□□□□ -1.17
TRIM48-201ENST00000417545 KLHL26Q53HC5 615 aa7.73□□□□□ -1.17
TRIM48-201ENST00000417545 DHRS4L2Q6PKH6 230 aa7.73□□□□□ -1.17
TRIM48-201ENST00000417545 Q6ZS92 163 aa7.73□□□□□ -1.17
TRIM48-201ENST00000417545 CCDC80Q76M96 950 aa7.73□□□□□ -1.17
TRIM48-201ENST00000417545 CYP4Z1Q86W10 505 aa7.73□□□□□ -1.17
TRIM48-201ENST00000417545 PLCZ1Q86YW0 608 aa7.73□□□□□ -1.17
TRIM48-201ENST00000417545 SPPL2CQ8IUH8 684 aa7.73□□□□□ -1.17
TRIM48-201ENST00000417545 EID3Q8N140 333 aa7.73□□□□□ -1.17
TRIM48-201ENST00000417545 CADM2Q8N3J6 435 aa7.73□□□□□ -1.17
TRIM48-201ENST00000417545 RBMXL3Q8N7X1 1067 aaKnown RBP7.73□□□□□ -1.17
TRIM48-201ENST00000417545 OR14L1PQ8NHC6 308 aa7.73□□□□□ -1.17
TRIM48-201ENST00000417545 GEMIN6Q8WXD5 167 aaKnown RBP7.73□□□□□ -1.17
TRIM48-201ENST00000417545 POP5Q969H6 163 aaKnown RBP7.73□□□□□ -1.17
TRIM48-201ENST00000417545 TAMM41Q96BW9 452 aa7.73□□□□□ -1.17
TRIM48-201ENST00000417545 HSH2DQ96JZ2 352 aa7.73□□□□□ -1.17
TRIM48-201ENST00000417545 LAT2Q9GZY6 243 aa7.73□□□□□ -1.17
TRIM48-201ENST00000417545 MED11Q9P086 117 aa7.73□□□□□ -1.17
TRIM48-201ENST00000417545 VDAC3Q9Y277 283 aa7.73□□□□□ -1.17
TRIM48-201ENST00000417545 SH3GLB1Q9Y371 365 aa7.73□□□□□ -1.17
TRIM48-201ENST00000417545 FAM32AQ9Y421 112 aaKnown RBP7.73□□□□□ -1.17
TRIM48-201ENST00000417545 PTPRQQ9UMZ3 2332 aa7.73□□□□□ -1.17
TRIM48-201ENST00000417545 A0A0G2JMM0 328 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 CENPVL1A0A0U1RR11 272 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 A0A1W2PPB8 328 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 A0A1W2PRS3 328 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 CDHR4A6H8M9 788 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 CFAP73A6NFT4 308 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 CLDN24A6NM45 220 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 TTLL8A6PVC2 850 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 KIR3DP1A8MWS1 328 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 NPIPB9F8W1W9 429 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 SORBS2O94875 1100 aaKnown RBP7.72□□□□□ -1.17
TRIM48-201ENST00000417545 MFN2O95140 757 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 IFNW1P05000 195 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 FESP07332 822 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 C8BP07358 591 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 GP1BBP13224 206 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 HK1P19367 917 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 PSMA4P25789 261 aaKnown RBP7.72□□□□□ -1.17
TRIM48-201ENST00000417545 DPP4P27487 766 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 ADH7P40394 386 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 KCNJ5P48544 419 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 SUMO3P55854 103 aaPredicted RBP7.72□□□□□ -1.17
TRIM48-201ENST00000417545 SELENOWP63302 87 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 PMP22Q01453 160 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 CHRNB3Q05901 458 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 DMTNQ08495 405 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 NFATC3Q12968 1075 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 GANABQ14697 944 aaKnown RBP7.72□□□□□ -1.17
TRIM48-201ENST00000417545 FAM98BQ52LJ0 330 aaKnown RBP7.72□□□□□ -1.17
TRIM48-201ENST00000417545 RAET1LQ5VY80 246 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 TIGD3Q6B0B8 471 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 APOOLQ6UXV4 268 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 DEF8Q6ZN54 512 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 PLEKHM3Q6ZWE6 761 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 CBLL1Q75N03 491 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 ZNF227Q86WZ6 799 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 CARM1Q86X55 608 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 C10orf67Q8IYJ2 551 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 EXD3Q8N9H8 876 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 TMEM234Q8WY98 164 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 CNOT9Q92600 299 aaKnown RBP7.72□□□□□ -1.17
TRIM48-201ENST00000417545 ZG16BQ96DA0 208 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 SLC47A1Q96FL8 570 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms