RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 KLF2Q9Y5W3 355 aaPredicted RBP16.3■□□□□ 0.2
SEMA3B-201ENST00000416295 CENPEQ02224 2701 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 OR2M5A3KFT3 312 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 PRAMEF27A3QJZ7 478 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 C7orf72A4D263 438 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 TMEM247A6NEH6 219 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 CD8B2A6NJW9 211 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 ANGPT2O15123 496 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 ZNF264O43296 627 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 EIF4E2O60573 245 aaKnown RBP16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 NUDT14O95848 222 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 EPPINO95925 133 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 PEPDP12955 493 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 ETFAP13804 333 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 ZNF708P17019 499 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 HOXB9P17482 250 aaPredicted RBP16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 POU3F2P20265 443 aaPredicted RBP16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 CHRNB4P30926 498 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 ADH7P40394 386 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 GNA13Q14344 377 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 SYPL1Q16563 259 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 TMEM44Q2T9K0 475 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 PAGE3Q5JUK9 113 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 RIPPLY2Q5TAB7 128 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 NSUN5P2Q63ZY6 315 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 EIF3MQ7L2H7 374 aaKnown RBP16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 OLIG3Q7RTU3 272 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 TMCO5AQ8N6Q1 288 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 ANKFN1Q8N957 763 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 TOR1AIP2Q8NFQ8 470 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 OR10Q1Q8NGQ4 319 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 CA5BP1Q8WTZ4 195 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 PMM1Q92871 262 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 SLC38A1Q9H2H9 487 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 MED17Q9NVC6 651 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 KCNE5Q9UJ90 142 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 LEF1Q9UJU2 399 aaPredicted RBP16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 ICAM5Q9UMF0 924 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 SLC35A3Q9Y2D2 325 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 NDUFAF1Q9Y375 327 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 L3MBTL1Q9Y468 752 aa16.29■□□□□ 0.2
SEMA3B-201ENST00000416295 NBPF19A0A087WUL8 3843 aa16.28■□□□□ 0.2
SEMA3B-201ENST00000416295 CLDN14O95500 239 aa16.28■□□□□ 0.2
SEMA3B-201ENST00000416295 CSTAP01040 98 aa16.28■□□□□ 0.2
SEMA3B-201ENST00000416295 CHRM4P08173 479 aa16.28■□□□□ 0.2
SEMA3B-201ENST00000416295 EIF1P41567 113 aaKnown RBP16.28■□□□□ 0.2
SEMA3B-201ENST00000416295 STARP49675 285 aa16.28■□□□□ 0.2
SEMA3B-201ENST00000416295 RNF144AP50876 292 aaPredicted RBP16.28■□□□□ 0.2
SEMA3B-201ENST00000416295 CLDN18P56856 261 aa16.28■□□□□ 0.2
SEMA3B-201ENST00000416295 CHRNEQ04844 493 aa16.28■□□□□ 0.2
SEMA3B-201ENST00000416295 SRYQ05066 204 aa16.28■□□□□ 0.2
SEMA3B-201ENST00000416295 RGNQ15493 299 aa16.28■□□□□ 0.2
SEMA3B-201ENST00000416295 PLPPR5Q32ZL2 321 aa16.28■□□□□ 0.2
SEMA3B-201ENST00000416295 CBLN3Q6UW01 205 aa16.28■□□□□ 0.2
SEMA3B-201ENST00000416295 GTPBP8Q8N3Z3 284 aaPredicted RBP16.28■□□□□ 0.2
SEMA3B-201ENST00000416295 MEIOBQ8N635 442 aa16.28■□□□□ 0.2
SEMA3B-201ENST00000416295 TRIB1Q96RU8 372 aa16.28■□□□□ 0.2
SEMA3B-201ENST00000416295 MTHFD2LQ9H903 347 aaPredicted RBP16.28■□□□□ 0.2
SEMA3B-201ENST00000416295 CALHM2Q9HA72 323 aa16.28■□□□□ 0.2
SEMA3B-201ENST00000416295 SLC25A37Q9NYZ2 338 aa16.28■□□□□ 0.2
SEMA3B-201ENST00000416295 CORO2BQ9UQ03 480 aa16.28■□□□□ 0.2
SEMA3B-201ENST00000416295 RNF6Q9Y252 685 aa16.28■□□□□ 0.2
SEMA3B-201ENST00000416295 GMEB1Q9Y692 573 aa16.28■□□□□ 0.2
SEMA3B-201ENST00000416295 AP4B1Q9Y6B7 739 aa16.28■□□□□ 0.2
SEMA3B-201ENST00000416295 CENPVL1A0A0U1RR11 272 aa16.27■□□□□ 0.2
SEMA3B-201ENST00000416295 H3BML4 177 aa16.27■□□□□ 0.2
SEMA3B-201ENST00000416295 BCHEP06276 602 aa16.27■□□□□ 0.2
SEMA3B-201ENST00000416295 SNRPB2P08579 225 aaKnown RBP16.27■□□□□ 0.2
SEMA3B-201ENST00000416295 TIMP3P35625 211 aa16.27■□□□□ 0.2
SEMA3B-201ENST00000416295 CRISP3P54108 245 aa16.27■□□□□ 0.2
SEMA3B-201ENST00000416295 EEFSECP57772 596 aaKnown RBP16.27■□□□□ 0.2
SEMA3B-201ENST00000416295 SKP2Q13309 424 aa16.27■□□□□ 0.2
SEMA3B-201ENST00000416295 CBFBQ13951 182 aa16.27■□□□□ 0.2
SEMA3B-201ENST00000416295 FGFBP1Q14512 234 aa16.27■□□□□ 0.2
SEMA3B-201ENST00000416295 MAPK14Q16539 360 aa16.27■□□□□ 0.2
SEMA3B-201ENST00000416295 NDUFAF6Q330K2 333 aa16.27■□□□□ 0.2
SEMA3B-201ENST00000416295 CMIPQ8IY22 773 aa16.27■□□□□ 0.2
SEMA3B-201ENST00000416295 DPP10Q8N608 796 aa16.27■□□□□ 0.2
SEMA3B-201ENST00000416295 OR5M1Q8NGP8 315 aa16.27■□□□□ 0.2
SEMA3B-201ENST00000416295 OR5W2Q8NH69 310 aa16.27■□□□□ 0.2
SEMA3B-201ENST00000416295 ARSGQ96EG1 525 aa16.27■□□□□ 0.2
SEMA3B-201ENST00000416295 TUBA1CQ9BQE3 449 aa16.27■□□□□ 0.2
SEMA3B-201ENST00000416295 LAT2Q9GZY6 243 aa16.27■□□□□ 0.2
SEMA3B-201ENST00000416295 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.27■□□□□ 0.2
SEMA3B-201ENST00000416295 VAPAQ9P0L0 249 aa16.27■□□□□ 0.2
SEMA3B-201ENST00000416295 SLAMF8Q9P0V8 285 aa16.27■□□□□ 0.2
SEMA3B-201ENST00000416295 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.27■□□□□ 0.2
SEMA3B-201ENST00000416295 ZNF337Q9Y3M9 751 aa16.27■□□□□ 0.2
SEMA3B-201ENST00000416295 FREM3P0C091 2139 aa16.27■□□□□ 0.19
SEMA3B-201ENST00000416295 NCOA6Q14686 2063 aaPredicted RBP16.26■□□□□ 0.19
SEMA3B-201ENST00000416295 TRBV5-3A0A0A0MS03 114 aa16.26■□□□□ 0.19
SEMA3B-201ENST00000416295 AGAP5A6NIR3 686 aa16.26■□□□□ 0.19
SEMA3B-201ENST00000416295 HSPB2A8KAH6 182 aa16.26■□□□□ 0.19
SEMA3B-201ENST00000416295 EVPLLA8MZ36 301 aa16.26■□□□□ 0.19
SEMA3B-201ENST00000416295 PRSS44E7EML9 344 aa16.26■□□□□ 0.19
SEMA3B-201ENST00000416295 OIP5O43482 229 aa16.26■□□□□ 0.19
SEMA3B-201ENST00000416295 TFPTP0C1Z6 253 aa16.26■□□□□ 0.19
SEMA3B-201ENST00000416295 LINGO3P0C6S8 592 aa16.26■□□□□ 0.19
SEMA3B-201ENST00000416295 BMP2P12643 396 aa16.26■□□□□ 0.19
SEMA3B-201ENST00000416295 ME2P23368 584 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms