RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 CXCL3P19876 107 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 TEAD1P28347 426 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 GNG2P59768 71 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 ID2Q02363 134 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 BTBD16Q32M84 506 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 IDNKQ5T6J7 187 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 PLET1Q6UQ28 207 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 ESPNLQ6ZVH7 1005 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 ARL14Q8N4G2 192 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 OR5M3Q8NGP4 307 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 CCL4L1Q8NHW4 92 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 BRIX1Q8TDN6 353 aaKnown RBP9.15□□□□□ -0.94
SS18-203ENST00000415083 AP3S1Q92572 193 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 SLC38A2Q96QD8 506 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 GFI1Q99684 422 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 SPATA5L1Q9BVQ7 753 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 ADGRL4Q9HBW9 690 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 SLC17A4Q9Y2C5 497 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 GSTK1Q9Y2Q3 226 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 ARHGEF17Q96PE2 2063 aaPredicted RBP9.15□□□□□ -0.94
SS18-203ENST00000415083 ZSCAN5BA6NJL1 495 aa9.15□□□□□ -0.95
SS18-203ENST00000415083 OR5F1O95221 314 aa9.15□□□□□ -0.95
SS18-203ENST00000415083 HLA-DPB1P04440 258 aa9.15□□□□□ -0.95
SS18-203ENST00000415083 ASGR2P07307 311 aa9.15□□□□□ -0.95
SS18-203ENST00000415083 MRPL3P09001 348 aaKnown RBP9.15□□□□□ -0.95
SS18-203ENST00000415083 CT62P0C5K7 136 aa9.15□□□□□ -0.95
SS18-203ENST00000415083 NDUFS1P28331 727 aa9.15□□□□□ -0.95
SS18-203ENST00000415083 RPS11P62280 158 aaKnown RBP eCLIP9.15□□□□□ -0.95
SS18-203ENST00000415083 SIM1P81133 766 aaPredicted RBP9.15□□□□□ -0.95
SS18-203ENST00000415083 FCN2Q15485 313 aa9.15□□□□□ -0.95
SS18-203ENST00000415083 ARHGAP11BQ3KRB8 267 aa9.15□□□□□ -0.95
SS18-203ENST00000415083 TANGO2Q6ICL3 276 aa9.15□□□□□ -0.95
SS18-203ENST00000415083 CDC73Q6P1J9 531 aa9.15□□□□□ -0.95
SS18-203ENST00000415083 ASB18Q6ZVZ8 466 aa9.15□□□□□ -0.95
SS18-203ENST00000415083 PLEKHM3Q6ZWE6 761 aa9.15□□□□□ -0.95
SS18-203ENST00000415083 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.15□□□□□ -0.95
SS18-203ENST00000415083 OR13C2Q8NGS9 318 aa9.15□□□□□ -0.95
SS18-203ENST00000415083 OR51Q1Q8NH59 317 aa9.15□□□□□ -0.95
SS18-203ENST00000415083 THAP4Q8WY91 577 aa9.15□□□□□ -0.95
SS18-203ENST00000415083 PAWRQ96IZ0 340 aaKnown RBP9.15□□□□□ -0.95
SS18-203ENST00000415083 FAIM2Q9BWQ8 316 aa9.15□□□□□ -0.95
SS18-203ENST00000415083 WDR26Q9H7D7 661 aa9.15□□□□□ -0.95
SS18-203ENST00000415083 ERVMER34-1Q9H9K5 563 aa9.15□□□□□ -0.95
SS18-203ENST00000415083 IL21RQ9HBE5 538 aa9.15□□□□□ -0.95
SS18-203ENST00000415083 ENAMQ9NRM1 1142 aa9.15□□□□□ -0.95
SS18-203ENST00000415083 SIDT1Q9NXL6 827 aaKnown RBP9.15□□□□□ -0.95
SS18-203ENST00000415083 BABAM2Q9NXR7 383 aa9.15□□□□□ -0.95
SS18-203ENST00000415083 TNFRSF10DQ9UBN6 386 aa9.15□□□□□ -0.95
SS18-203ENST00000415083 TBC1D29Q9UFV1 150 aa9.15□□□□□ -0.95
SS18-203ENST00000415083 MOSPD1Q9UJG1 213 aa9.15□□□□□ -0.95
SS18-203ENST00000415083 ACSL5Q9ULC5 683 aa9.15□□□□□ -0.95
SS18-203ENST00000415083 RASD1Q9Y272 281 aa9.15□□□□□ -0.95
SS18-203ENST00000415083 TP53BP1Q12888 1972 aaPredicted RBP9.14□□□□□ -0.95
SS18-203ENST00000415083 PTP4A3O75365 173 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 RGS9O75916 674 aaPredicted RBP9.14□□□□□ -0.95
SS18-203ENST00000415083 CTSBP07858 339 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 HNRNPA1P09651 372 aaKnown RBP eCLIP9.14□□□□□ -0.95
SS18-203ENST00000415083 NDUFV2P19404 249 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 MAP3K8P41279 467 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 RGS8P57771 180 aaPredicted RBP9.14□□□□□ -0.95
SS18-203ENST00000415083 OR12D2P58182 307 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 MGAT2Q10469 447 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 FAM205BPQ63HN1 556 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 VITQ6UXI7 678 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 MEPCEQ7L2J0 689 aaKnown RBP9.14□□□□□ -0.95
SS18-203ENST00000415083 SFTPA2Q8IWL1 248 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 SLC37A3Q8NCC5 494 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 OR2T33Q8NG76 320 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 SMG7Q92540 1137 aaKnown RBP9.14□□□□□ -0.95
SS18-203ENST00000415083 TM4SF19Q96DZ7 209 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 FGF22Q9HCT0 170 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 MED17Q9NVC6 651 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 ST6GALNAC2Q9UJ37 374 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 CARNS1A5YM72 827 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 HCRTR1O43613 425 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 EFCAB14O75071 495 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 SOX30O94993 753 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 PCDH8O95206 1070 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 TFP02787 698 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 GYPBP06028 91 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 PTBP1P26599 531 aaKnown RBP eCLIP9.14□□□□□ -0.953e-9■■■■□ 23.3
SS18-203ENST00000415083 RFX3P48380 749 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 MTNR1BP49286 362 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 PRMT2P55345 433 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 P2RX3P56373 397 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 C19orf57Q0VDD7 668 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 ENPP2Q13822 863 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 GALEQ14376 348 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 TMEM255AQ5JRV8 349 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 HBMQ6B0K9 141 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 OAFQ86UD1 273 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 TTTY10Q9BZA0 68 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 RSPH9Q9H1X1 276 aaPredicted RBP9.14□□□□□ -0.95
SS18-203ENST00000415083 FLRT3Q9NZU0 649 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 ZNF624Q9P2J8 865 aaPredicted RBP9.14□□□□□ -0.95
SS18-203ENST00000415083 HEATR5AQ86XA9 2040 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 TRAV27A0A087WT01 109 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 LOC105369274A0A096LPK9 316 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 FAM240BA0A1B0GVZ2 78 aa9.14□□□□□ -0.95
SS18-203ENST00000415083 FOXS1O43638 330 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms