RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 LIX1Q8N485 282 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 CIDECQ96AQ7 238 aaPredicted RBP4.48□□□□□ -1.69
VPS41-205ENST00000414632 TLCD1Q96CP7 247 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 C11orf24Q96F05 449 aaPredicted RBP4.48□□□□□ -1.69
VPS41-205ENST00000414632 BBS4Q96RK4 519 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 SORT1Q99523 831 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 MNTQ99583 582 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 TRMOQ9BU70 441 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 FAIM2Q9BWQ8 316 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 ITPAQ9BY32 194 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 WWTR1Q9GZV5 400 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 CXorf21Q9HAI6 301 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 EML4Q9HC35 981 aaKnown RBP4.48□□□□□ -1.69
VPS41-205ENST00000414632 MIEF1Q9NQG6 463 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 C1orf109Q9NX04 203 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 MAT2BQ9NZL9 334 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 EHD3Q9NZN3 535 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 MARCOQ9UEW3 520 aaPredicted RBP4.48□□□□□ -1.69
VPS41-205ENST00000414632 BAIAP2L1Q9UHR4 511 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 SH3BGRL2Q9UJC5 107 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 VPS4AQ9UN37 437 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 PPIEQ9UNP9 301 aaKnown RBP4.48□□□□□ -1.69
VPS41-205ENST00000414632 EXO1Q9UQ84 846 aaKnown RBP4.48□□□□□ -1.69
VPS41-205ENST00000414632 ENTPD4Q9Y227 616 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 CCL27Q9Y4X3 112 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 ZNF780BQ9Y6R6 833 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 USP9XQ93008 2570 aaPredicted RBP4.48□□□□□ -1.69
VPS41-205ENST00000414632 ESPL1Q14674 2120 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 NUP214P35658 2090 aaPredicted RBP4.47□□□□□ -1.69
VPS41-205ENST00000414632 RP1L1Q8IWN7 2480 aaPredicted RBP4.47□□□□□ -1.69
VPS41-205ENST00000414632 PCNX3Q9H6A9 2034 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 GOLGA8QA0A0J9YX86 632 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 C2orf92A0A1B0GVN3 265 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 GOLGA8OA6NCC3 632 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 ANKUB1A6NFN9 424 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 FAM166BA8MTA8 275 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 A8MVJ9 347 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 TMEM114B3SHH9 223 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 NPIPA5E9PKD4 350 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 GOLGA8NF8WBI6 632 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 H3BQF6 201 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 BIRC5O15392 142 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 NME2P1O60361 137 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 CBX6O95503 412 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 NADKO95544 446 aaPredicted RBP4.47□□□□□ -1.69
VPS41-205ENST00000414632 TSPAN15O95858 294 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 FGF4P08620 206 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 RNF224P0DH78 156 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 CCL3P10147 92 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 BCKDHAP12694 445 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 H2AFXP16104 143 aaPredicted RBP4.47□□□□□ -1.69
VPS41-205ENST00000414632 CSNK2A2P19784 350 aaPredicted RBP4.47□□□□□ -1.69
VPS41-205ENST00000414632 S1PR1P21453 382 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 GPX3P22352 226 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 PRPH2P23942 346 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 DNASE1L1P49184 302 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 TDGF1P3P51864 188 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 NCBP2P52298 156 aaKnown RBP eCLIP4.47□□□□□ -1.69
VPS41-205ENST00000414632 NME5P56597 212 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 FBXW4P57775 412 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 TRA2BP62995 288 aaKnown RBP4.47□□□□□ -1.69
VPS41-205ENST00000414632 HSF1Q00613 529 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 SRSF1Q07955 248 aaKnown RBP eCLIP4.47□□□□□ -1.69
VPS41-205ENST00000414632 GTF3C1Q12789 2109 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 HSPB3Q12988 150 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 STX3Q13277 289 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 PTGR1Q14914 329 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 HEPACAMQ14CZ8 416 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 KIAA0040Q15053 153 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 EBPQ15125 230 aaKnown RBP4.47□□□□□ -1.69
VPS41-205ENST00000414632 PRICKLE4Q2TBC4 344 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 CD300EQ496F6 205 aaPredicted RBP4.47□□□□□ -1.69
VPS41-205ENST00000414632 PDCD4Q53EL6 469 aaKnown RBP4.47□□□□□ -1.69
VPS41-205ENST00000414632 ZNF628Q5EBL2 1059 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 XKR7Q5GH72 579 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 AGBL2Q5U5Z8 902 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 PRAMEF20Q5VT98 475 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 SFRP4Q6FHJ7 346 aaPredicted RBP4.47□□□□□ -1.69
VPS41-205ENST00000414632 FAM71E1Q6IPT2 247 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 TMEM107Q6UX40 140 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 GFRALQ6UXV0 394 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 ZNF551Q7Z340 670 aaPredicted RBP4.47□□□□□ -1.69
VPS41-205ENST00000414632 SZRD1Q7Z422 152 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 CROCCP2Q86T23 111 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 KRTCAP2Q8N6L1 136 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 BCORP1Q8N888 145 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 ZNF615Q8N8J6 731 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 FNDC5Q8NAU1 212 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 TMEM178AQ8NBL3 297 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 OR10G3Q8NGC4 313 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 OR52R1Q8NGF1 315 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 OR5L2Q8NGL0 311 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 C16orf52Q8NHV5 167 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 FBXO30Q8TB52 745 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 FAR1Q8WVX9 515 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 TMEM125Q96AQ2 219 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 TUBGCP3Q96CW5 907 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 OTUB1Q96FW1 271 aaPredicted RBP4.47□□□□□ -1.69
VPS41-205ENST00000414632 SCMH1Q96GD3 660 aa4.47□□□□□ -1.69
VPS41-205ENST00000414632 ART5Q96L15 291 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms