RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 ZNF621Q6ZSS3 439 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 KIF18BQ86Y91 864 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 GCNT2Q8N0V5 402 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 TMCO5AQ8N6Q1 288 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 CHDHQ8NE62 594 aaPredicted RBP10.11□□□□□ -0.79
RFFL-204ENST00000414419 RFWD2Q8NHY2 731 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 MIPOL1Q8TD10 442 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 MAELQ96JY0 434 aaKnown RBP10.11□□□□□ -0.79
RFFL-204ENST00000414419 TEX37Q96LM6 180 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 C7orf26Q96N11 449 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 CCDC115Q96NT0 180 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 PRRG4Q9BZD6 226 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 VIPAS39Q9H9C1 493 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 MCCC2Q9HCC0 563 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 MED17Q9NVC6 651 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 PAQR5Q9NXK6 330 aaPredicted RBP10.11□□□□□ -0.79
RFFL-204ENST00000414419 MKLN1Q9UL63 735 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 CARD8Q9Y2G2 431 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 USH1CQ9Y6N9 552 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 LRBAP50851 2863 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 UQCRHLA0A096LP55 91 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 CCDC154A6NI56 674 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 C9JVG2 144 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 RFXANKO14593 260 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 EIF1AYO14602 144 aaKnown RBP10.1□□□□□ -0.79
RFFL-204ENST00000414419 POLR3GO15318 223 aaPredicted RBP10.1□□□□□ -0.79
RFFL-204ENST00000414419 ZNF264O43296 627 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 CYP7B1O75881 506 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 ANP32DO95626 131 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 TGM6O95932 706 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 CRHP06850 196 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 FCGR2AP12318 317 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 CAPN3P20807 821 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 IL12AP29459 219 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 EIF1AXP47813 144 aaKnown RBP10.1□□□□□ -0.79
RFFL-204ENST00000414419 RNF144AP50876 292 aaPredicted RBP10.1□□□□□ -0.79
RFFL-204ENST00000414419 CCR4P51679 360 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 SUCLG1P53597 346 aaKnown RBP10.1□□□□□ -0.79
RFFL-204ENST00000414419 SUMO3P55854 103 aaPredicted RBP10.1□□□□□ -0.79
RFFL-204ENST00000414419 DLX5P56178 289 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 CLDN15P56746 228 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 CLDN20P56880 219 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 STX1BP61266 288 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 ZNF117Q03924 483 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 FOXF2Q12947 444 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 SNTB1Q13884 538 aaKnown RBP10.1□□□□□ -0.79
RFFL-204ENST00000414419 PON3Q15166 354 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 PLPPR5Q32ZL2 321 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 FBXL19-AS1Q494R0 122 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 GPAT3Q53EU6 434 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 PDSS1Q5T2R2 415 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 PDZK1Q5T2W1 519 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 POMZP3Q6PJE2 187 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 LUZP2Q86TE4 346 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 MIER2Q8N344 545 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 GTPBP8Q8N3Z3 284 aaPredicted RBP10.1□□□□□ -0.79
RFFL-204ENST00000414419 CNEP1R1Q8N9A8 125 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 TOR1AIP2Q8NFQ8 470 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 NEURL3Q96EH8 262 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 MARK4Q96L34 752 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 LURAP1Q96LR2 239 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 RNF145Q96MT1 663 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 NMUR2Q9GZQ4 415 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 PIGMQ9H3S5 423 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 SERHL2Q9H4I8 314 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 RMND5AQ9H871 391 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 INTS9Q9NV88 658 aaKnown RBP10.1□□□□□ -0.79
RFFL-204ENST00000414419 ZIM2Q9NZV7 527 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 L3MBTL1Q9Y468 752 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 WDR45Q9Y484 360 aa10.1□□□□□ -0.79
RFFL-204ENST00000414419 ANKHD1Q8IWZ3 2542 aaKnown RBP10.09□□□□□ -0.79
RFFL-204ENST00000414419 C7orf72A4D263 438 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 SERINC4A6NH21 518 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 GJE1A6NN92 205 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 ENO4A6NNW6 628 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 H0YC42 278 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 EIF4E2O60573 245 aaKnown RBP10.09□□□□□ -0.79
RFFL-204ENST00000414419 FCMRO60667 390 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 SMNDC1O75940 238 aaKnown RBP eCLIP10.09□□□□□ -0.79
RFFL-204ENST00000414419 TGDSO95455 350 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 SYNGR4O95473 234 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 KRT75O95678 551 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 CSTAP01040 98 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 GSNP06396 782 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 UBL4AP11441 157 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 TPD52P55327 224 aaPredicted RBP10.09□□□□□ -0.79
RFFL-204ENST00000414419 RAC1P63000 192 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 PPP2R2AP63151 447 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 TXNL4AP83876 142 aaKnown RBP10.09□□□□□ -0.79
RFFL-204ENST00000414419 CBFBQ13951 182 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 TMEM44Q2T9K0 475 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.09□□□□□ -0.79
RFFL-204ENST00000414419 HEPHL1Q6MZM0 1159 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 CBLN3Q6UW01 205 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 EPGNQ6UW88 154 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 ESPNLQ6ZVH7 1005 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 TMEM200AQ86VY9 491 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 RNF130Q86XS8 419 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 ZZZ3Q8IYH5 903 aa10.09□□□□□ -0.79
RFFL-204ENST00000414419 LILRA2Q8N149 483 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms