RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 ALOX15BO15296 676 aa2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 SEC22BO75396 215 aa2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 LY6G6DO95868 133 aa2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 IGKV5-2P06315 115 aa2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 ALPIP09923 528 aa2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 IL10P22301 178 aa2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 PRDX6P30041 224 aa2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 PRDX2P32119 198 aa2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 CHRNA3P32297 505 aa2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 ATP6V1E1P36543 226 aa2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 RPS6P62753 249 aaKnown RBP2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 SRYQ05066 204 aa2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 CD47Q08722 323 aa2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 SLC39A6Q13433 755 aa2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 ASAH1Q13510 395 aa2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 CAMK4Q16566 473 aa2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 SLC22A10Q63ZE4 541 aa2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 DMKNQ6E0U4 476 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 RAB12Q6IQ22 244 aa2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 HDDC3Q8N4P3 179 aa2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 FAM71CQ8NEG0 241 aa2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 OR13F1Q8NGS4 319 aa2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 CCDC47Q96A33 483 aaKnown RBP2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 RWDD1Q9H446 243 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 TMEM231Q9H6L2 316 aa2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 MEPEQ9NQ76 525 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 GHRLQ9UBU3 117 aa2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 CLIP2Q9UDT6 1046 aa2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 MYH6P13533 1939 aa2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 BRCA1P38398 1863 aaKnown RBP2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 SIPA1L1O43166 1804 aa2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 ARFGEF1Q9Y6D6 1849 aa2.75□□□□□ -1.97
HMGB1P11-201ENST00000413899 MED23Q9ULK4 1368 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 BAZ2AQ9UIF9 1905 aaKnown RBP2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 RNF103-CHMP3A0A140T963 221 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 TTC26A0AVF1 554 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 RNF222A6NCQ9 220 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 FRG2CA6NGY1 282 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 H3BMH7 237 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 MT-ATP6P00846 226 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 P0C879 139 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 SDC1P18827 310 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 IDSP22304 550 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 ANP32AP39687 249 aaKnown RBP2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 LYZP61626 148 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 IL18R1Q13478 541 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 RAB35Q15286 201 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 TMEM26Q6ZUK4 368 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 P4HA3Q7Z4N8 544 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 VASH2Q86V25 355 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 APOBEC3FQ8IUX4 373 aaKnown RBP2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 NFAM1Q8NET5 270 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 OR56B1Q8NGI3 324 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 CCDC26Q8TAB7 109 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 ADIPOR1Q96A54 375 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 VSIG2Q96IQ7 327 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 CASD1Q96PB1 797 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 DPH7Q9BTV6 452 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 YTHDF1Q9BYJ9 559 aaKnown RBP2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 ELOVL4Q9GZR5 314 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 DUS2Q9NX74 493 aaKnown RBP2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 ELOVL2Q9NXB9 296 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 GALPQ9UBC7 116 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 SPASTQ9UBP0 616 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 PLA2G4CQ9UP65 541 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 MOKQ9UQ07 419 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 KIF13BQ9NQT8 1826 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 DUOX1Q9NRD9 1551 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 MYH1P12882 1939 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 MYH8P13535 1937 aa2.74□□□□□ -1.97
HMGB1P11-201ENST00000413899 COL1A1P02452 1464 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 IGKV6D-41A0A0C4DH26 115 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 E7ENQ6 273 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 DUX4L4P0CJ87 422 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 ETS1P14921 441 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 ZP3P21754 424 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 IGHV1-2P23083 117 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 IL2RGP31785 369 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 EMDP50402 254 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 ATXN3P54252 364 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 RIPPLY3P57055 190 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 PRKCEQ02156 737 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 GABPB1Q06547 395 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 PUDPQ08623 228 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 RABL6Q3YEC7 729 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 GLYR1Q49A26 553 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 BEND6Q5SZJ8 279 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 MEDAGQ5VYS4 303 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 PNCKQ6P2M8 343 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 BTNL3Q6UXE8 466 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 PARGQ86W56 976 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 C9orf40Q8IXQ3 194 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 GPR65Q8IYL9 337 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 UBQLNLQ8IYU4 475 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 BADQ92934 168 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 ART4Q93070 314 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 MRPL38Q96DV4 380 aaKnown RBP2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 FAM122AQ96E09 287 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 SAMD8Q96LT4 415 aa2.73□□□□□ -1.97
HMGB1P11-201ENST00000413899 TMEM237Q96Q45 408 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms