RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 PRORSD1PA6NEY8 169 aa27.82■■■□□ 2.04
CSNK1E-206ENST00000413574 ZNF264O43296 627 aa27.82■■■□□ 2.04
CSNK1E-206ENST00000413574 PABPC4LP0CB38 370 aaKnown RBP27.82■■■□□ 2.04
CSNK1E-206ENST00000413574 NID1P14543 1247 aa27.82■■■□□ 2.04
CSNK1E-206ENST00000413574 TCEA1P23193 301 aaKnown RBP27.82■■■□□ 2.04
CSNK1E-206ENST00000413574 PGM1P36871 562 aa27.82■■■□□ 2.04
CSNK1E-206ENST00000413574 ADH7P40394 386 aa27.82■■■□□ 2.04
CSNK1E-206ENST00000413574 ZNF311Q5JNZ3 666 aa27.82■■■□□ 2.04
CSNK1E-206ENST00000413574 ERICH5Q6P6B1 374 aa27.82■■■□□ 2.04
CSNK1E-206ENST00000413574 EIF3MQ7L2H7 374 aaKnown RBP27.82■■■□□ 2.04
CSNK1E-206ENST00000413574 FAM156AQ8NDB6 213 aa27.82■■■□□ 2.04
CSNK1E-206ENST00000413574 CNOT9Q92600 299 aaKnown RBP27.82■■■□□ 2.04
CSNK1E-206ENST00000413574 TDGF1P3P51864 188 aa27.81■■■□□ 2.04
CSNK1E-206ENST00000413574 BNIP1Q12981 228 aa27.81■■■□□ 2.04
CSNK1E-206ENST00000413574 MRPL2Q5T653 305 aaKnown RBP27.81■■■□□ 2.04
CSNK1E-206ENST00000413574 KRT73Q86Y46 540 aa27.81■■■□□ 2.04
CSNK1E-206ENST00000413574 B4GALNT2Q8NHY0 566 aa27.81■■■□□ 2.04
CSNK1E-206ENST00000413574 OIT3Q8WWZ8 545 aa27.81■■■□□ 2.04
CSNK1E-206ENST00000413574 KCTD14Q9BQ13 255 aaPredicted RBP27.81■■■□□ 2.04
CSNK1E-206ENST00000413574 SLX1AQ9BQ83 275 aa27.81■■■□□ 2.04
CSNK1E-206ENST00000413574 M0QX08 132 aa27.81■■■□□ 2.04
CSNK1E-206ENST00000413574 ZNHIT1O43257 154 aa27.81■■■□□ 2.04
CSNK1E-206ENST00000413574 CDC40O60508 579 aaKnown RBP eCLIP27.81■■■□□ 2.042e-7■■□□□ 14
CSNK1E-206ENST00000413574 OPN1SWP03999 348 aa27.81■■■□□ 2.04
CSNK1E-206ENST00000413574 EEF1A1P68104 462 aaKnown RBP27.81■■■□□ 2.04
CSNK1E-206ENST00000413574 TLE1Q04724 770 aa27.81■■■□□ 2.04
CSNK1E-206ENST00000413574 SKP2Q13309 424 aa27.81■■■□□ 2.04
CSNK1E-206ENST00000413574 LIN52Q52LA3 116 aa27.81■■■□□ 2.04
CSNK1E-206ENST00000413574 SLC30A8Q8IWU4 369 aa27.81■■■□□ 2.04
CSNK1E-206ENST00000413574 CLIP4Q8N3C7 705 aa27.81■■■□□ 2.04
CSNK1E-206ENST00000413574 TMCO5AQ8N6Q1 288 aa27.81■■■□□ 2.04
CSNK1E-206ENST00000413574 ZNF607Q96SK3 696 aa27.81■■■□□ 2.04
CSNK1E-206ENST00000413574 ICAM5Q9UMF0 924 aa27.81■■■□□ 2.04
CSNK1E-206ENST00000413574 DNAJC13O75165 2243 aa27.8■■■□□ 2.04
CSNK1E-206ENST00000413574 TCN1P20061 433 aaPredicted RBP27.8■■■□□ 2.04
CSNK1E-206ENST00000413574 CRYBA2P53672 197 aa27.8■■■□□ 2.04
CSNK1E-206ENST00000413574 HSF1Q00613 529 aa27.8■■■□□ 2.04
CSNK1E-206ENST00000413574 DMTNQ08495 405 aa27.8■■■□□ 2.04
CSNK1E-206ENST00000413574 VEZF1Q14119 521 aa27.8■■■□□ 2.04
CSNK1E-206ENST00000413574 SLC10A1Q14973 349 aa27.8■■■□□ 2.04
CSNK1E-206ENST00000413574 LARS2Q15031 903 aaKnown RBP27.8■■■□□ 2.04
CSNK1E-206ENST00000413574 EIPR1Q53HC9 387 aa27.8■■■□□ 2.04
CSNK1E-206ENST00000413574 ARSKQ6UWY0 536 aa27.8■■■□□ 2.04
CSNK1E-206ENST00000413574 YRDCQ86U90 279 aaKnown RBP27.8■■■□□ 2.04
CSNK1E-206ENST00000413574 SMYD1Q8NB12 490 aa27.8■■■□□ 2.04
CSNK1E-206ENST00000413574 ZKSCAN7Q9P0L1 754 aaPredicted RBP27.8■■■□□ 2.04
CSNK1E-206ENST00000413574 ZNF232Q9UNY5 417 aa27.8■■■□□ 2.04
CSNK1E-206ENST00000413574 SLC35A3Q9Y2D2 325 aa27.8■■■□□ 2.04
CSNK1E-206ENST00000413574 IFT52Q9Y366 437 aa27.8■■■□□ 2.04
CSNK1E-206ENST00000413574 TPST1O60507 370 aa27.79■■■□□ 2.04
CSNK1E-206ENST00000413574 MFN2O95140 757 aa27.79■■■□□ 2.04
CSNK1E-206ENST00000413574 THBS1P07996 1170 aa27.79■■■□□ 2.04
CSNK1E-206ENST00000413574 DPP4P27487 766 aa27.79■■■□□ 2.04
CSNK1E-206ENST00000413574 MSX2P35548 267 aaPredicted RBP27.79■■■□□ 2.04
CSNK1E-206ENST00000413574 FOXK1P85037 733 aa27.79■■■□□ 2.04
CSNK1E-206ENST00000413574 GLIPR1L2Q4G1C9 344 aa27.79■■■□□ 2.04
CSNK1E-206ENST00000413574 INTS11Q5TA45 600 aaKnown RBP27.79■■■□□ 2.04
CSNK1E-206ENST00000413574 BNC2Q6ZN30 1099 aaPredicted RBP27.79■■■□□ 2.04
CSNK1E-206ENST00000413574 FAM71CQ8NEG0 241 aa27.79■■■□□ 2.04
CSNK1E-206ENST00000413574 FAM83FQ8NEG4 500 aaPredicted RBP27.79■■■□□ 2.04
CSNK1E-206ENST00000413574 SLC7A6OSQ96CW6 309 aaPredicted RBP27.79■■■□□ 2.04
CSNK1E-206ENST00000413574 SLC6A15Q9H2J7 730 aa27.79■■■□□ 2.04
CSNK1E-206ENST00000413574 CACYBPQ9HB71 228 aaKnown RBP27.79■■■□□ 2.04
CSNK1E-206ENST00000413574 DNAJB12Q9NXW2 375 aaKnown RBP27.79■■■□□ 2.04
CSNK1E-206ENST00000413574 SEC14L3Q9UDX4 400 aa27.79■■■□□ 2.04
CSNK1E-206ENST00000413574 MED12Q93074 2177 aa27.79■■■□□ 2.04
CSNK1E-206ENST00000413574 HPNP05981 417 aa27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 P2RX1P51575 399 aa27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 CCR4P51679 360 aa27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 WIPI1Q5MNZ9 446 aaPredicted RBP27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 CCDC80Q76M96 950 aa27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 COMTD1Q86VU5 262 aa27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 ARMC8Q8IUR7 673 aa27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 TAMM41Q96BW9 452 aa27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 ZNF524Q96C55 264 aa27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 C1GALT1C1Q96EU7 318 aa27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 GPR137Q96N19 417 aa27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 LAT2Q9GZY6 243 aa27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 C1orf21Q9H246 121 aa27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 PTGES2Q9H7Z7 377 aa27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 CD300AQ9UGN4 299 aa27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 EGFL7Q9UHF1 273 aa27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 DKKL1Q9UK85 242 aa27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 VDAC3Q9Y277 283 aa27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 CDHR4A6H8M9 788 aa27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 EIF4E2O60573 245 aaKnown RBP27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 ADAM11O75078 769 aa27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 SERPINB7O75635 380 aa27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 ENDOUP21128 410 aaKnown RBP27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 MSX1P28360 303 aa27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 DSCR4P56555 118 aaPredicted RBP27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 CEACAM7Q14002 265 aa27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 SAMD4BQ5PRF9 694 aaKnown RBP27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 SPPL2CQ8IUH8 684 aa27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 CMIPQ8IY22 773 aa27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 SPATA5L1Q9BVQ7 753 aa27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 QPCTLQ9NXS2 382 aa27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 RPH3AQ9Y2J0 694 aaPredicted RBP27.78■■■□□ 2.04
CSNK1E-206ENST00000413574 ZIC3O60481 467 aa27.77■■■□□ 2.04
CSNK1E-206ENST00000413574 NUDT14O95848 222 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms