RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 UNC5DQ6UXZ4 953 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 GPR155Q7Z3F1 870 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 OAFQ86UD1 273 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 ATOH1Q92858 354 aaPredicted RBP8.02□□□□□ -1.13
PBRM1-209ENST00000412587 FEVQ99581 238 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 SEMA4CQ9C0C4 833 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 P2RX2Q9UBL9 471 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 SERTAD3Q9UJW9 196 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 IKZF2Q9UKS7 526 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 MAP1BP46821 2468 aaKnown RBP8.02□□□□□ -1.13
PBRM1-209ENST00000412587 KNL1Q8NG31 2342 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 DDX60Q8IY21 1712 aaKnown RBP8.02□□□□□ -1.13
PBRM1-209ENST00000412587 LAMTOR5O43504 91 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 TPST2O60704 377 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 AGR2O95994 175 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 PTHP01270 115 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 GIPP09681 153 aaPredicted RBP8.02□□□□□ -1.13
PBRM1-209ENST00000412587 SLC35E2BP0CK96 405 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 BPIP17213 487 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 CLCN7P51798 805 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 NRG3P56975 720 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 CRB2Q5IJ48 1285 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 SPANXN4Q5MJ08 99 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 C6orf136Q5SQH8 315 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 ALKAL1Q6UXT8 129 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 PDZD3Q86UT5 571 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 ARMC10Q8N2F6 343 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 C9orf62Q8N4C0 152 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 KDF1Q8NAX2 398 aaPredicted RBP8.02□□□□□ -1.13
PBRM1-209ENST00000412587 MOGAT1Q96PD6 335 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 ALOXE3Q9BYJ1 711 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 TBL1XR1Q9BZK7 514 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 FBRSQ9HAH7 460 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 BABAM2Q9NXR7 383 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 KLHL9Q9P2J3 617 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 SUSD2Q9UGT4 822 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 ICKQ9UPZ9 632 aa8.02□□□□□ -1.13
PBRM1-209ENST00000412587 MYH9P35579 1960 aaKnown RBP8.02□□□□□ -1.13
PBRM1-209ENST00000412587 SCG5P05408 212 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 ADRB3P13945 408 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 NME1P15531 152 aaKnown RBP8.01□□□□□ -1.13
PBRM1-209ENST00000412587 GSTM3P21266 225 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 TGFBR1P36897 503 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 GRK6P43250 576 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 PPT1P50897 306 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 SEC61A1P61619 476 aaKnown RBP8.01□□□□□ -1.13
PBRM1-209ENST00000412587 MEF2AQ02078 507 aaPredicted RBP8.01□□□□□ -1.13
PBRM1-209ENST00000412587 OC90Q02509 493 aaPredicted RBP8.01□□□□□ -1.13
PBRM1-209ENST00000412587 ETFDHQ16134 617 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 DUOXA1Q1HG43 343 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 ZNF311Q5JNZ3 666 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 OR2B11Q5JQS5 317 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 TANGO2Q6ICL3 276 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 KLHL24Q6TFL4 600 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 SLC36A4Q6YBV0 504 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 RTL10Q7L3V2 364 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 OVCH2Q7RTZ1 564 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 OR10H4Q8NGA5 316 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 FGF13Q92913 245 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 TRMT2BQ96GJ1 504 aaKnown RBP8.01□□□□□ -1.13
PBRM1-209ENST00000412587 TOE1Q96GM8 510 aaKnown RBP8.01□□□□□ -1.13
PBRM1-209ENST00000412587 CAMK1GQ96NX5 476 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 SULT4A1Q9BR01 284 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 TMEM43Q9BTV4 400 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 SUCNR1Q9BXA5 334 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 ELL3Q9HB65 397 aaPredicted RBP8.01□□□□□ -1.13
PBRM1-209ENST00000412587 DCAF13Q9NV06 445 aaKnown RBP8.01□□□□□ -1.13
PBRM1-209ENST00000412587 FAM120CQ9NX05 1096 aaKnown RBP8.01□□□□□ -1.13
PBRM1-209ENST00000412587 WASF3Q9UPY6 502 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 PCDHGA2Q9Y5H1 932 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 C13orf42A0A1B0GVH6 325 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 GATBO75879 557 aaKnown RBP8.01□□□□□ -1.13
PBRM1-209ENST00000412587 TXNDC12O95881 172 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 HOXD4P09016 255 aaPredicted RBP8.01□□□□□ -1.13
PBRM1-209ENST00000412587 GTF2F2P13984 249 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 CPN1P15169 458 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 WNT4P56705 351 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 LINC00471Q8N535 108 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 BVESQ8NE79 360 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 OR5T1Q8NG75 326 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 FAM3CQ92520 227 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 HS6ST2Q96MM7 605 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 SLC17A9Q9BYT1 436 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 ATG5Q9H1Y0 275 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 SH3BGRL2Q9UJC5 107 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 PCDHA9Q9Y5H5 950 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 C1GALT1C1LP0DN25 315 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 KDELR2P33947 212 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 CD68P34810 354 aaPredicted RBP8.01□□□□□ -1.13
PBRM1-209ENST00000412587 MICAQ29983 383 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 LYPD4Q6UWN0 246 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 HTR3DQ70Z44 454 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 CPXM2Q8N436 756 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 SEMA6DQ8NFY4 1073 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 RNF141Q8WVD5 230 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 UCN3Q969E3 161 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 FKBP10Q96AY3 582 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 NECAB3Q96P71 396 aaPredicted RBP8.01□□□□□ -1.13
PBRM1-209ENST00000412587 TRIB3Q96RU7 358 aa8.01□□□□□ -1.13
PBRM1-209ENST00000412587 ZDHHC5Q9C0B5 715 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms