RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 RAB8BQ92930 207 aa17.14■□□□□ 0.33
SF3A1-202ENST00000411423 ZFP3Q96NJ6 502 aa17.14■□□□□ 0.33
SF3A1-202ENST00000411423 ICAM5Q9UMF0 924 aa17.14■□□□□ 0.33
SF3A1-202ENST00000411423 MYO9AB2RTY4 2548 aa17.14■□□□□ 0.33
SF3A1-202ENST00000411423 HRNRQ86YZ3 2850 aaPredicted RBP17.13■□□□□ 0.33
SF3A1-202ENST00000411423 A0A087WZY1 265 aa17.13■□□□□ 0.33
SF3A1-202ENST00000411423 C7orf72A4D263 438 aa17.13■□□□□ 0.33
SF3A1-202ENST00000411423 LINC01387J3KSC0 135 aa17.13■□□□□ 0.33
SF3A1-202ENST00000411423 BCAS1O75363 584 aaPredicted RBP17.13■□□□□ 0.33
SF3A1-202ENST00000411423 AQP8O94778 261 aa17.13■□□□□ 0.33
SF3A1-202ENST00000411423 OR12D1P0DN82 309 aa17.13■□□□□ 0.33
SF3A1-202ENST00000411423 UQCRC2P22695 453 aa17.13■□□□□ 0.33
SF3A1-202ENST00000411423 S100A3P33764 101 aa17.13■□□□□ 0.33
SF3A1-202ENST00000411423 KIR2DL2P43627 348 aaPredicted RBP17.13■□□□□ 0.33
SF3A1-202ENST00000411423 KIR2DL3P43628 341 aa17.13■□□□□ 0.33
SF3A1-202ENST00000411423 CLNS1AP54105 237 aaKnown RBP17.13■□□□□ 0.33
SF3A1-202ENST00000411423 PON3Q15166 354 aa17.13■□□□□ 0.33
SF3A1-202ENST00000411423 ARHGAP11BQ3KRB8 267 aa17.13■□□□□ 0.33
SF3A1-202ENST00000411423 PDZK1Q5T2W1 519 aa17.13■□□□□ 0.33
SF3A1-202ENST00000411423 ANXA8L1Q5VT79 327 aa17.13■□□□□ 0.33
SF3A1-202ENST00000411423 HEPHL1Q6MZM0 1159 aa17.13■□□□□ 0.33
SF3A1-202ENST00000411423 TNFAIP8L2Q6P589 184 aaPredicted RBP17.13■□□□□ 0.33
SF3A1-202ENST00000411423 P4HA3Q7Z4N8 544 aa17.13■□□□□ 0.33
SF3A1-202ENST00000411423 MISPQ8IVT2 679 aa17.13■□□□□ 0.33
SF3A1-202ENST00000411423 LINC01560Q8TB33 94 aa17.13■□□□□ 0.33
SF3A1-202ENST00000411423 STARD4Q96DR4 205 aa17.13■□□□□ 0.33
SF3A1-202ENST00000411423 CCDC115Q96NT0 180 aa17.13■□□□□ 0.33
SF3A1-202ENST00000411423 TMEM185BQ9H7F4 350 aa17.13■□□□□ 0.33
SF3A1-202ENST00000411423 GALNT8Q9NY28 637 aa17.13■□□□□ 0.33
SF3A1-202ENST00000411423 BTNL2Q9UIR0 455 aa17.13■□□□□ 0.33
SF3A1-202ENST00000411423 MKLN1Q9UL63 735 aa17.13■□□□□ 0.33
SF3A1-202ENST00000411423 DTNAQ9Y4J8 743 aa17.13■□□□□ 0.33
SF3A1-202ENST00000411423 CREBBPQ92793 2442 aa17.13■□□□□ 0.33
SF3A1-202ENST00000411423 A0A0J9YW62 118 aa17.12■□□□□ 0.33
SF3A1-202ENST00000411423 FAM221AA4D161 298 aa17.12■□□□□ 0.33
SF3A1-202ENST00000411423 TRPC5OSA6NMA1 111 aa17.12■□□□□ 0.33
SF3A1-202ENST00000411423 EIF1AYO14602 144 aaKnown RBP17.12■□□□□ 0.33
SF3A1-202ENST00000411423 KLF11O14901 512 aa17.12■□□□□ 0.33
SF3A1-202ENST00000411423 UGT2B17O75795 530 aa17.12■□□□□ 0.33
SF3A1-202ENST00000411423 PLAURQ03405 335 aa17.12■□□□□ 0.33
SF3A1-202ENST00000411423 GUSBP1Q15486 140 aa17.12■□□□□ 0.33
SF3A1-202ENST00000411423 GPR68Q15743 365 aa17.12■□□□□ 0.33
SF3A1-202ENST00000411423 MAPK14Q16539 360 aa17.12■□□□□ 0.33
SF3A1-202ENST00000411423 BHLHB9Q6PI77 547 aa17.12■□□□□ 0.33
SF3A1-202ENST00000411423 BTLAQ7Z6A9 289 aa17.12■□□□□ 0.33
SF3A1-202ENST00000411423 MTERF4Q7Z6M4 381 aaKnown RBP17.12■□□□□ 0.33
SF3A1-202ENST00000411423 HMGN2P46Q86SG4 172 aa17.12■□□□□ 0.33
SF3A1-202ENST00000411423 ZNF614Q8N883 585 aa17.12■□□□□ 0.33
SF3A1-202ENST00000411423 ZBTB8AQ96BR9 441 aa17.12■□□□□ 0.33
SF3A1-202ENST00000411423 NEURL3Q96EH8 262 aa17.12■□□□□ 0.33
SF3A1-202ENST00000411423 SLC35A5Q9BS91 424 aa17.12■□□□□ 0.33
SF3A1-202ENST00000411423 RBM24Q9BX46 236 aaKnown RBP17.12■□□□□ 0.33
SF3A1-202ENST00000411423 ZNF350Q9GZX5 532 aa17.12■□□□□ 0.33
SF3A1-202ENST00000411423 HOXD1Q9GZZ0 328 aa17.12■□□□□ 0.33
SF3A1-202ENST00000411423 RNF122Q9H9V4 155 aa17.12■□□□□ 0.33
SF3A1-202ENST00000411423 SLC6A13Q9NSD5 602 aa17.12■□□□□ 0.33
SF3A1-202ENST00000411423 PCDHGB4Q9UN71 923 aa17.12■□□□□ 0.33
SF3A1-202ENST00000411423 A8MXE2 369 aa17.11■□□□□ 0.33
SF3A1-202ENST00000411423 CTAG2O75638 210 aa17.11■□□□□ 0.33
SF3A1-202ENST00000411423 GSNP06396 782 aa17.11■□□□□ 0.33
SF3A1-202ENST00000411423 P2RX1P51575 399 aa17.11■□□□□ 0.33
SF3A1-202ENST00000411423 ZNF41P51814 821 aaPredicted RBP17.11■□□□□ 0.33
SF3A1-202ENST00000411423 SIRPAP78324 504 aa17.11■□□□□ 0.33
SF3A1-202ENST00000411423 ZNF141Q15928 474 aa17.11■□□□□ 0.33
SF3A1-202ENST00000411423 DPY19L1Q2PZI1 675 aa17.11■□□□□ 0.33
SF3A1-202ENST00000411423 NXNQ6DKJ4 435 aa17.11■□□□□ 0.33
SF3A1-202ENST00000411423 TYW3Q6IPR3 259 aaKnown RBP17.11■□□□□ 0.33
SF3A1-202ENST00000411423 CHMP1BQ7LBR1 199 aa17.11■□□□□ 0.33
SF3A1-202ENST00000411423 TMEM200AQ86VY9 491 aa17.11■□□□□ 0.33
SF3A1-202ENST00000411423 OR10D3Q8NH80 312 aa17.11■□□□□ 0.33
SF3A1-202ENST00000411423 PIWIL2Q8TC59 973 aaKnown RBP17.11■□□□□ 0.33
SF3A1-202ENST00000411423 GPR119Q8TDV5 335 aa17.11■□□□□ 0.33
SF3A1-202ENST00000411423 ZG16BQ96DA0 208 aa17.11■□□□□ 0.33
SF3A1-202ENST00000411423 ATP6V1G3Q96LB4 118 aa17.11■□□□□ 0.33
SF3A1-202ENST00000411423 GPATCH1Q9BRR8 931 aaKnown RBP17.11■□□□□ 0.33
SF3A1-202ENST00000411423 NMUR2Q9GZQ4 415 aa17.11■□□□□ 0.33
SF3A1-202ENST00000411423 SLCO1B3Q9NPD5 702 aa17.11■□□□□ 0.33
SF3A1-202ENST00000411423 SERINC4A6NH21 518 aa17.1■□□□□ 0.33
SF3A1-202ENST00000411423 SLCO1B7G3V0H7 640 aa17.1■□□□□ 0.33
SF3A1-202ENST00000411423 TNFSF11O14788 317 aa17.1■□□□□ 0.33
SF3A1-202ENST00000411423 CXCL13O43927 109 aa17.1■□□□□ 0.33
SF3A1-202ENST00000411423 CGAP01215 116 aa17.1■□□□□ 0.33
SF3A1-202ENST00000411423 PGRP06401 933 aa17.1■□□□□ 0.33
SF3A1-202ENST00000411423 NID1P14543 1247 aa17.1■□□□□ 0.33
SF3A1-202ENST00000411423 EIF1AXP47813 144 aaKnown RBP17.1■□□□□ 0.33
SF3A1-202ENST00000411423 EEFSECP57772 596 aaKnown RBP17.1■□□□□ 0.33
SF3A1-202ENST00000411423 RAC1P63000 192 aa17.1■□□□□ 0.33
SF3A1-202ENST00000411423 PDCD4Q53EL6 469 aaKnown RBP17.1■□□□□ 0.33
SF3A1-202ENST00000411423 COX20Q5RI15 118 aa17.1■□□□□ 0.33
SF3A1-202ENST00000411423 ZNF474Q6S9Z5 364 aaPredicted RBP17.1■□□□□ 0.33
SF3A1-202ENST00000411423 FRRS1Q6ZNA5 592 aa17.1■□□□□ 0.33
SF3A1-202ENST00000411423 CDH24Q86UP0 819 aa17.1■□□□□ 0.33
SF3A1-202ENST00000411423 ZNF527Q8NB42 609 aa17.1■□□□□ 0.33
SF3A1-202ENST00000411423 OR9I1Q8NGQ6 314 aa17.1■□□□□ 0.33
SF3A1-202ENST00000411423 FBXO27Q8NI29 283 aa17.1■□□□□ 0.33
SF3A1-202ENST00000411423 XAGE5Q8WWM1 108 aa17.1■□□□□ 0.33
SF3A1-202ENST00000411423 OR52E6Q96RD3 313 aa17.1■□□□□ 0.33
SF3A1-202ENST00000411423 OPN3Q9H1Y3 402 aaPredicted RBP17.1■□□□□ 0.33
SF3A1-202ENST00000411423 LIME1Q9H400 295 aa17.1■□□□□ 0.33
SF3A1-202ENST00000411423 FOXD3Q9UJU5 478 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms