RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 WDR53Q7Z5U6 358 aaPredicted RBP12.57□□□□□ -0.4
LIMS1-205ENST00000410093 ZNF761Q86XN6 746 aaPredicted RBP12.57□□□□□ -0.4
LIMS1-205ENST00000410093 PLXDC1Q8IUK5 500 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 SLITRK4Q8IW52 837 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 IQCF1Q8N6M8 205 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 PIK3R3Q92569 461 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 RPL3LQ92901 407 aaKnown RBP12.57□□□□□ -0.4
LIMS1-205ENST00000410093 VSTM2LQ96N03 204 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 OR5M11Q96RB7 305 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 PRSS27Q9BQR3 290 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 DSN1Q9H410 356 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 EGLN3Q9H6Z9 239 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 ZBTB20Q9HC78 741 aaPredicted RBP12.57□□□□□ -0.4
LIMS1-205ENST00000410093 CTPS2Q9NRF8 586 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 ZNF223Q9UK11 482 aaPredicted RBP12.57□□□□□ -0.4
LIMS1-205ENST00000410093 SSR3Q9UNL2 185 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 EXOGQ9Y2C4 368 aaKnown RBP12.57□□□□□ -0.4
LIMS1-205ENST00000410093 UGT2A1Q9Y4X1 527 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 EFCAB7A8K855 629 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 NUDT21O43809 227 aaKnown RBP12.57□□□□□ -0.4
LIMS1-205ENST00000410093 FOXD2O60548 495 aaPredicted RBP12.57□□□□□ -0.4
LIMS1-205ENST00000410093 THY1P04216 161 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 HTR1FP30939 366 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 PSPHP78330 225 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 PSG6Q00889 435 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 DMWDQ09019 674 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 KRR1Q13601 381 aaKnown RBP12.57□□□□□ -0.4
LIMS1-205ENST00000410093 EXOSC7Q15024 291 aaKnown RBP12.57□□□□□ -0.4
LIMS1-205ENST00000410093 INAQ16352 499 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 MAPK14Q16539 360 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.57□□□□□ -0.4
LIMS1-205ENST00000410093 AADACL4Q5VUY2 407 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 HMGN2P46Q86SG4 172 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 IGFN1Q86VF2 1251 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 TMEFF1Q8IYR6 380 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 FAM160A2Q8N612 972 aaPredicted RBP12.57□□□□□ -0.4
LIMS1-205ENST00000410093 C1orf216Q8TAB5 229 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 TMEM255BQ8WV15 326 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 HSPBAP1Q96EW2 488 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 RNFT2Q96EX2 444 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 PLA2G12AQ9BZM1 189 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 INPP5EQ9NRR6 644 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 STARD5Q9NSY2 213 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 TMEM74BQ9NUR3 256 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 C2orf42Q9NWW7 574 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 SOHLH2Q9NX45 425 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 CNIH4Q9P003 139 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 SEMA5BQ9P283 1151 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 MRTO4Q9UKD2 239 aaKnown RBP12.57□□□□□ -0.4
LIMS1-205ENST00000410093 SLC35A3Q9Y2D2 325 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 PMF1-BGLAPU3KQ54 211 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 A0A0B4J2E0 115 aa12.56□□□□□ -0.4
LIMS1-205ENST00000410093 LOC100506127A0A0U1RQW1 187 aa12.56□□□□□ -0.4
LIMS1-205ENST00000410093 A0A1B0GX12 115 aa12.56□□□□□ -0.4
LIMS1-205ENST00000410093 HCN1O60741 890 aa12.56□□□□□ -0.4
LIMS1-205ENST00000410093 MED26O95402 600 aa12.56□□□□□ -0.4
LIMS1-205ENST00000410093 IGF2P01344 180 aa12.56□□□□□ -0.4
LIMS1-205ENST00000410093 GNSP15586 552 aa12.56□□□□□ -0.4
LIMS1-205ENST00000410093 GALP22466 123 aa12.56□□□□□ -0.4
LIMS1-205ENST00000410093 ADH7P40394 386 aa12.56□□□□□ -0.4
LIMS1-205ENST00000410093 ETV6P41212 452 aa12.56□□□□□ -0.4
LIMS1-205ENST00000410093 AFF3P51826 1226 aaKnown RBP12.56□□□□□ -0.4
LIMS1-205ENST00000410093 ATP12AP54707 1039 aa12.56□□□□□ -0.4
LIMS1-205ENST00000410093 CDH11P55287 796 aa12.56□□□□□ -0.4
LIMS1-205ENST00000410093 HSD11B2P80365 405 aa12.56□□□□□ -0.4
LIMS1-205ENST00000410093 TPBGQ13641 420 aa12.56□□□□□ -0.4
LIMS1-205ENST00000410093 FGFBP1Q14512 234 aa12.56□□□□□ -0.4
LIMS1-205ENST00000410093 DEFB110Q30KQ9 67 aa12.56□□□□□ -0.4
LIMS1-205ENST00000410093 CCNJQ5T5M9 372 aa12.56□□□□□ -0.4
LIMS1-205ENST00000410093 SFTPA2Q8IWL1 248 aa12.56□□□□□ -0.4
LIMS1-205ENST00000410093 LNX2Q8N448 690 aa12.56□□□□□ -0.4
LIMS1-205ENST00000410093 MFSD4AQ8N468 514 aa12.56□□□□□ -0.4
LIMS1-205ENST00000410093 OR8D4Q8NGM9 314 aa12.56□□□□□ -0.4
LIMS1-205ENST00000410093 B4GALNT2Q8NHY0 566 aa12.56□□□□□ -0.4
LIMS1-205ENST00000410093 PEX11GQ96HA9 241 aa12.56□□□□□ -0.4
LIMS1-205ENST00000410093 AHCYL2Q96HN2 611 aaKnown RBP12.56□□□□□ -0.4
LIMS1-205ENST00000410093 CHCHD6Q9BRQ6 235 aa12.56□□□□□ -0.4
LIMS1-205ENST00000410093 DUSP15Q9H1R2 295 aaPredicted RBP12.56□□□□□ -0.4
LIMS1-205ENST00000410093 OR51E2Q9H255 320 aa12.56□□□□□ -0.4
LIMS1-205ENST00000410093 HHATLQ9HCP6 504 aa12.56□□□□□ -0.4
LIMS1-205ENST00000410093 SIDT1Q9NXL6 827 aaKnown RBP12.56□□□□□ -0.4
LIMS1-205ENST00000410093 SCN2AQ99250 2005 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 TP53BP1Q12888 1972 aaPredicted RBP12.55□□□□□ -0.4
LIMS1-205ENST00000410093 NPIPB9F8W1W9 429 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 DUX1O43812 170 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 PPM1BO75688 479 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 PIAS2O75928 621 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 SNX4O95219 450 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 LYPD3O95274 346 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 SDHBP21912 280 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 HTR2AP28223 471 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 IDUAP35475 653 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 GCGRP47871 477 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 ID4P47928 161 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 GPR143P51810 404 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 GAS1P54826 345 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 DCAF7P61962 342 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 BDH1Q02338 343 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 SRSF5Q13243 272 aaKnown RBP12.55□□□□□ -0.4
LIMS1-205ENST00000410093 GPR50Q13585 617 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms