RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 KLHL17Q6TDP4 642 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 GDPGP1Q6ZNW5 385 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 MSANTD1Q6ZTZ1 278 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 BCDIN3DQ7Z5W3 292 aaKnown RBP13.3□□□□□ -0.28
MINDY4-202ENST00000409881 FAM9CQ8IZT9 166 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 C19orf18Q8NEA5 215 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 CHTF18Q8WVB6 975 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 MS4A6EQ96DS6 147 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 SPRTNQ9H040 489 aaPredicted RBP13.3□□□□□ -0.28
MINDY4-202ENST00000409881 FGF21Q9NSA1 209 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 TXNL4BQ9NX01 149 aaKnown RBP13.3□□□□□ -0.28
MINDY4-202ENST00000409881 NUP50Q9UKX7 468 aa13.3□□□□□ -0.28
MINDY4-202ENST00000409881 FAM240BA0A1B0GVZ2 78 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 I3L521 148 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 PLPP1O14494 284 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 LRRTM2O43300 516 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 TPST2O60704 377 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 FTH1P19P0C7X4 201 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 ZNF888P0CJ79 500 aaPredicted RBP13.29□□□□□ -0.28
MINDY4-202ENST00000409881 SLC2A2P11168 524 aaPredicted RBP13.29□□□□□ -0.28
MINDY4-202ENST00000409881 PRPH2P23942 346 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 RRAS2P62070 204 aaPredicted RBP13.29□□□□□ -0.28
MINDY4-202ENST00000409881 MRPL28Q13084 256 aaKnown RBP13.29□□□□□ -0.28
MINDY4-202ENST00000409881 TMEM35AQ53FP2 167 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 SPIN4Q56A73 249 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 TRIQKQ629K1 86 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 C9orf62Q8N4C0 152 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 DTX3Q8N9I9 347 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 RGMAQ96B86 450 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 QRFPRQ96P65 431 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 CHST8Q9H2A9 424 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 NDUFB11Q9NX14 153 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 AHSPQ9NZD4 102 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 CDV3Q9UKY7 258 aaKnown RBP13.29□□□□□ -0.28
MINDY4-202ENST00000409881 SNTNA6NMZ2 147 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 ZAR1LA6NP61 321 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 C4orf51C9J302 202 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 PDPK1O15530 556 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 TRIM3O75382 744 aaPredicted RBP13.29□□□□□ -0.28
MINDY4-202ENST00000409881 TSPAN9O75954 239 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 GASTP01350 101 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 GBAP04062 536 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 IGFBP1P08833 259 aaPredicted RBP13.29□□□□□ -0.28
MINDY4-202ENST00000409881 ENPP1P22413 925 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 SDC2P34741 201 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 SLC9A3P48764 834 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 NOVA1P51513 510 aaKnown RBP13.29□□□□□ -0.28
MINDY4-202ENST00000409881 TAGLNQ01995 201 aaKnown RBP13.29□□□□□ -0.28
MINDY4-202ENST00000409881 SRSF11Q05519 484 aaKnown RBP13.29□□□□□ -0.28
MINDY4-202ENST00000409881 GAB1Q13480 694 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 RGNQ15493 299 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 IFI44LQ53G44 452 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 ZBTB37Q5TC79 503 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 TRIM40Q6P9F5 258 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 COMMD6Q7Z4G1 85 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 WDR53Q7Z5U6 358 aaPredicted RBP13.29□□□□□ -0.28
MINDY4-202ENST00000409881 PHC2Q8IXK0 858 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 TIGD4Q8IY51 512 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 OR8H3Q8N146 312 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 SYT14Q8NB59 555 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 AGBL5Q8NDL9 886 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 OR2L5Q8NG80 312 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 OR1L3Q8NH93 324 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 OR6C1Q96RD1 312 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 SPATA9Q9BWV2 254 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 RACGAP1Q9H0H5 632 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 RBFOX1Q9NWB1 397 aaKnown RBP13.29□□□□□ -0.28
MINDY4-202ENST00000409881 TMCC3Q9ULS5 477 aa13.29□□□□□ -0.28
MINDY4-202ENST00000409881 YARS2Q9Y2Z4 477 aaKnown RBP13.29□□□□□ -0.28
MINDY4-202ENST00000409881 MRPS2Q9Y399 296 aaKnown RBP13.29□□□□□ -0.28
MINDY4-202ENST00000409881 CIB4A0PJX0 185 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 EFCAB7A8K855 629 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 A8MUA0 341 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 HYAL3O43820 417 aaPredicted RBP13.28□□□□□ -0.28
MINDY4-202ENST00000409881 MT-CO3P00414 261 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 ARSBP15848 533 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 SSR2P43308 183 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 ALDH9A1P49189 494 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 CRISP1P54107 249 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 SNRPNP63162 240 aaKnown RBP13.28□□□□□ -0.28
MINDY4-202ENST00000409881 ACY1Q03154 408 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 TGM3Q08188 693 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 P2RY14Q15391 338 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 TCTE1Q5JU00 501 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 HES3Q5TGS1 186 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 UBE3DQ7Z6J8 389 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 Q8N402 240 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 GAL3ST3Q96A11 431 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 TMEM80Q96HE8 168 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 DCLRE1CQ96SD1 692 aaKnown RBP13.28□□□□□ -0.28
MINDY4-202ENST00000409881 OCIAD1Q9NX40 245 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 SH3BP4Q9P0V3 963 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 COMMD3Q9UBI1 195 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 URADA6NGE7 173 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 NPIPB8E9PQR5 432 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 SLC30A4O14863 429 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 TM4SF5O14894 197 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 PLOD3O60568 738 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 SLC22A5O76082 557 aa13.28□□□□□ -0.28
MINDY4-202ENST00000409881 KLK1P06870 262 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms