RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 CBFBQ13951 182 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 NFYCQ13952 458 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 FGFBP1Q14512 234 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 RGNQ15493 299 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 BCL2A1Q16548 175 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 MMEL1Q495T6 779 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 PAGE3Q5JUK9 113 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 EIF3MQ7L2H7 374 aaKnown RBP9.88□□□□□ -0.83
CHMP3-205ENST00000409810 CHMP1BQ7LBR1 199 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 DHDDSQ86SQ9 333 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 LACC1Q8IV20 430 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 CMIPQ8IY22 773 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 PEX5LQ8IYB4 626 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 ULK2Q8IYT8 1036 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 DPP10Q8N608 796 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 MEIOBQ8N635 442 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 ANKFN1Q8N957 763 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 WDR60Q8WVS4 1066 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 ITLN2Q8WWU7 325 aaPredicted RBP9.88□□□□□ -0.83
CHMP3-205ENST00000409810 ASB5Q8WWX0 329 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 WDYHV1Q96HA8 205 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 LAT2Q9GZY6 243 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 MTHFD2LQ9H903 347 aaPredicted RBP9.88□□□□□ -0.83
CHMP3-205ENST00000409810 SAR1AQ9NR31 198 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 MED17Q9NVC6 651 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 VAPAQ9P0L0 249 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 CARD8Q9Y2G2 431 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 CAPN7Q9Y6W3 813 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 MED12LQ86YW9 2145 aa9.88□□□□□ -0.83
CHMP3-205ENST00000409810 USP9YO00507 2555 aaPredicted RBP9.87□□□□□ -0.83
CHMP3-205ENST00000409810 OR2M5A3KFT3 312 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 C7orf72A4D263 438 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 C5orf58C9J3I9 102 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 H3BML4 177 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 CYP7B1O75881 506 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 DBIP07108 87 aaKnown RBP9.87□□□□□ -0.83
CHMP3-205ENST00000409810 CHRM4P08173 479 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 RNF224P0DH78 156 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 HOXB9P17482 250 aaPredicted RBP9.87□□□□□ -0.83
CHMP3-205ENST00000409810 ME2P23368 584 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 ADH6P28332 368 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 LSP1P33241 339 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 LHX2P50458 406 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 MVDP53602 400 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 NUP107P57740 925 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 B3GALT5-AS1P59052 145 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 RPS3AP61247 264 aaKnown RBP9.87□□□□□ -0.83
CHMP3-205ENST00000409810 GNGT1P63211 74 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 CHRNEQ04844 493 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 SRYQ05066 204 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 KLF10Q13118 480 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 SYPL1Q16563 259 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 PLPPR5Q32ZL2 321 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 ACSF3Q4G176 576 aaPredicted RBP9.87□□□□□ -0.83
CHMP3-205ENST00000409810 COQ5Q5HYK3 327 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 DCST1Q5T197 706 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 GCNT6Q5T4J0 391 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 RIPPLY2Q5TAB7 128 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 PRAMEF8Q5VWM4 474 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 PRAMEF7Q5VXH5 474 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 AP1ARQ63HQ0 302 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 ARSKQ6UWY0 536 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 MAMDC2Q7Z304 686 aaPredicted RBP9.87□□□□□ -0.83
CHMP3-205ENST00000409810 SPATA21Q7Z572 469 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 GTPBP8Q8N3Z3 284 aaPredicted RBP9.87□□□□□ -0.83
CHMP3-205ENST00000409810 METTL25Q8N6Q8 603 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 OR10Q1Q8NGQ4 319 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 OR5W2Q8NH69 310 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 ZPLD1Q8TCW7 415 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 CA5BP1Q8WTZ4 195 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 SDCCAG3Q96C92 435 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 PSMG3-AS1Q96PY0 264 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 TTYH2Q9BSA4 534 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 SLC38A1Q9H2H9 487 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 ARMC7Q9H6L4 198 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 SLC52A3Q9NQ40 469 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 SLC25A37Q9NYZ2 338 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 SLAMF8Q9P0V8 285 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 ICAM5Q9UMF0 924 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 L3MBTL1Q9Y468 752 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 FAM215AQ9Y5M1 114 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 GPC6Q9Y625 555 aaPredicted RBP9.87□□□□□ -0.83
CHMP3-205ENST00000409810 GMEB1Q9Y692 573 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 AP4B1Q9Y6B7 739 aa9.87□□□□□ -0.83
CHMP3-205ENST00000409810 TRBV5-3A0A0A0MS03 114 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 A0A0G2JPF8 293 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 PRAMEF27A3QJZ7 478 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 GMNCA6NCL1 334 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 AGAP5A6NIR3 686 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 CD8B2A6NJW9 211 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 GJE1A6NN92 205 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 HNRNPCL2B2RXH8 293 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 HNRNPCL3B7ZW38 293 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 HNRNPCL1O60812 293 aaKnown RBP9.86□□□□□ -0.83
CHMP3-205ENST00000409810 CLDN14O95500 239 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 EPPINO95925 133 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 IL2RAP01589 272 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 C1QCP02747 245 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 TFPTP0C1Z6 253 aa9.86□□□□□ -0.83
CHMP3-205ENST00000409810 UBTFL6P0CB48 400 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms