RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 TIAF1O95411 115 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 GKN3PP0CG01 181 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 ITIH1P19827 911 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 OMPP47874 163 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 DCAF7P61962 342 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 PIGFQ07326 219 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 FGFBP1Q14512 234 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 OR1Q1Q15612 314 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 NNATQ16517 81 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 PWWP2BQ6NUJ5 590 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 ZNF321PQ8N8H1 164 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 OR13F1Q8NGS4 319 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 TRUB1Q8WWH5 349 aaKnown RBP12.99□□□□□ -0.33
LIMS2-206ENST00000409754 KRCC1Q9NPI7 259 aaPredicted RBP12.99□□□□□ -0.33
LIMS2-206ENST00000409754 DNAJB12Q9NXW2 375 aaKnown RBP12.99□□□□□ -0.33
LIMS2-206ENST00000409754 ERVK-18Q9QC07 812 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 CTSFQ9UBX1 484 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 RSL24D1Q9UHA3 163 aaKnown RBP12.99□□□□□ -0.33
LIMS2-206ENST00000409754 KNTC1P50748 2209 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 SH3D21A4FU49 640 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 FRG2CA6NGY1 282 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 VGLL3A8MV65 326 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 D6RAR5 112 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 ZNF701M0R085 212 aaPredicted RBP12.99□□□□□ -0.33
LIMS2-206ENST00000409754 RGS10O43665 173 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 LYPD3O95274 346 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 IGFBP1P08833 259 aaPredicted RBP12.99□□□□□ -0.33
LIMS2-206ENST00000409754 SPINK2P20155 84 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 PCMT1P22061 227 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 FPR3P25089 353 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 SNRPGP62308 76 aaKnown RBP12.99□□□□□ -0.33
LIMS2-206ENST00000409754 OCA2Q04671 838 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 TUBA3CQ13748 450 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 NKAIN1Q4KMZ8 207 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 PHF19Q5T6S3 580 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 GTF2IRD2BQ6EKJ0 949 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 ZNF613Q6PF04 617 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 RASSF6Q6ZTQ3 369 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 PRSS48Q7RTY5 328 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 GTF2IRD2Q86UP8 949 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 LAPTM4BQ86VI4 370 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 PPP1R3BQ86XI6 285 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 PRSS58Q8IYP2 241 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 ALDH16A1Q8IZ83 802 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 RNF113BQ8IZP6 322 aaKnown RBP12.99□□□□□ -0.33
LIMS2-206ENST00000409754 ZNF614Q8N883 585 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 SLC38A9Q8NBW4 561 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 STT3BQ8TCJ2 826 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 CNOT9Q92600 299 aaKnown RBP12.99□□□□□ -0.33
LIMS2-206ENST00000409754 ADIPOR1Q96A54 375 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 CLIP3Q96DZ5 547 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 LCORQ96JN0 433 aaPredicted RBP12.99□□□□□ -0.33
LIMS2-206ENST00000409754 SIGLEC11Q96RL6 698 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 MYCBPQ99417 103 aaPredicted RBP12.99□□□□□ -0.33
LIMS2-206ENST00000409754 PRSS27Q9BQR3 290 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 CCDC90BQ9GZT6 254 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 HOXD1Q9GZZ0 328 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 TMEM27Q9HBJ8 222 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 PSORS1C1Q9UIG5 152 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 COMMD3-BMI1R4GMX3 469 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 FER1L5A0AVI2 2057 aa12.98□□□□□ -0.33
LIMS2-206ENST00000409754 PMS2P1A4D2B8 440 aa12.98□□□□□ -0.33
LIMS2-206ENST00000409754 KLF4O43474 513 aa12.98□□□□□ -0.33
LIMS2-206ENST00000409754 SEC14L2O76054 403 aa12.98□□□□□ -0.33
LIMS2-206ENST00000409754 IL33O95760 270 aa12.98□□□□□ -0.33
LIMS2-206ENST00000409754 ZGLP1P0C6A0 271 aa12.98□□□□□ -0.33
LIMS2-206ENST00000409754 FGF5P12034 268 aa12.98□□□□□ -0.33
LIMS2-206ENST00000409754 GSTT1P30711 240 aa12.98□□□□□ -0.33
LIMS2-206ENST00000409754 STAT5AP42229 794 aa12.98□□□□□ -0.33
LIMS2-206ENST00000409754 RNF144AP50876 292 aaPredicted RBP12.98□□□□□ -0.33
LIMS2-206ENST00000409754 DCDP81605 110 aaKnown RBP12.98□□□□□ -0.33
LIMS2-206ENST00000409754 HES3Q5TGS1 186 aa12.98□□□□□ -0.33
LIMS2-206ENST00000409754 ZNF385CQ66K41 422 aaPredicted RBP12.98□□□□□ -0.33
LIMS2-206ENST00000409754 CASP12Q6UXS9 341 aa12.98□□□□□ -0.33
LIMS2-206ENST00000409754 PTCHD4Q6ZW05 846 aa12.98□□□□□ -0.33
LIMS2-206ENST00000409754 ZNF550Q7Z398 422 aa12.98□□□□□ -0.33
LIMS2-206ENST00000409754 NRMQ8IXM6 262 aa12.98□□□□□ -0.33
LIMS2-206ENST00000409754 SVOPQ8N4V2 548 aa12.98□□□□□ -0.33
LIMS2-206ENST00000409754 OR1N1Q8NGS0 311 aa12.98□□□□□ -0.33
LIMS2-206ENST00000409754 TMEM255BQ8WV15 326 aa12.98□□□□□ -0.33
LIMS2-206ENST00000409754 MUL1Q969V5 352 aa12.98□□□□□ -0.33
LIMS2-206ENST00000409754 TSC22D3Q99576 134 aa12.98□□□□□ -0.33
LIMS2-206ENST00000409754 NUDT9Q9BW91 350 aa12.98□□□□□ -0.33
LIMS2-206ENST00000409754 SLC25A19Q9HC21 320 aa12.98□□□□□ -0.33
LIMS2-206ENST00000409754 FKBP14Q9NWM8 211 aa12.98□□□□□ -0.33
LIMS2-206ENST00000409754 CLN6Q9NWW5 311 aa12.98□□□□□ -0.33
LIMS2-206ENST00000409754 MRTO4Q9UKD2 239 aaKnown RBP12.98□□□□□ -0.33
LIMS2-206ENST00000409754 KLK13Q9UKR3 277 aa12.98□□□□□ -0.33
LIMS2-206ENST00000409754 ZZEF1O43149 2961 aa12.97□□□□□ -0.33
LIMS2-206ENST00000409754 IGF2RP11717 2491 aa12.97□□□□□ -0.33
LIMS2-206ENST00000409754 SERINC4A6NH21 518 aa12.97□□□□□ -0.33
LIMS2-206ENST00000409754 OR6C76A6NM76 312 aa12.97□□□□□ -0.33
LIMS2-206ENST00000409754 CLCA1A8K7I4 914 aa12.97□□□□□ -0.33
LIMS2-206ENST00000409754 MT-ND2P03891 347 aa12.97□□□□□ -0.33
LIMS2-206ENST00000409754 DCKP27707 260 aa12.97□□□□□ -0.33
LIMS2-206ENST00000409754 LCN1P31025 176 aa12.97□□□□□ -0.33
LIMS2-206ENST00000409754 CSTF2P33240 577 aaKnown RBP eCLIP12.97□□□□□ -0.33
LIMS2-206ENST00000409754 ACAA2P42765 397 aaKnown RBP12.97□□□□□ -0.33
LIMS2-206ENST00000409754 GIPRP48546 466 aa12.97□□□□□ -0.33
LIMS2-206ENST00000409754 CDK5Q00535 292 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms