RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 KLHDC8BQ8IXV7 354 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 MAML2Q8IZL2 1156 aaPredicted RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 ZNF843Q8N446 348 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 ATPAF2Q8N5M1 289 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 PTGR2Q8N8N7 351 aaPredicted RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 OR8D4Q8NGM9 314 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 CEP76Q8TAP6 659 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 CREB3L4Q8TEY5 395 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 SCARB1Q8WTV0 552 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 APH1BQ8WW43 257 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 THAP4Q8WY91 577 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 ACOT12Q8WYK0 555 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 SUSD6Q92537 303 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 ULK4Q96C45 1275 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 FAM120BQ96EK7 910 aaKnown RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 MOCOSQ96EN8 888 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 TBATAQ96M53 351 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 PPM1MQ96MI6 270 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 OR5M11Q96RB7 305 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 GFM1Q96RP9 751 aaKnown RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 LGMNQ99538 433 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 TREX2Q9BQ50 279 aaPredicted RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 C7orf50Q9BRJ6 194 aaKnown RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 TMEM43Q9BTV4 400 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 TTPALQ9BTX7 342 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 THUMPD3Q9BV44 507 aaKnown RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 NFKBIZQ9BYH8 718 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 NKX6-2Q9C056 277 aaPredicted RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 DPAGT1Q9H3H5 408 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 ZNF334Q9HCZ1 680 aaPredicted RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 SEPSECSQ9HD40 501 aaKnown RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 ABCB9Q9NP78 766 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 DDX4Q9NQI0 724 aaKnown RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 RXFP3Q9NSD7 469 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 SNTG1Q9NSN8 517 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 CLN6Q9NWW5 311 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 C1orf109Q9NX04 203 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 NDUFB11Q9NX14 153 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 MED11Q9P086 117 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 PDP1Q9P0J1 537 aaPredicted RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 NLKQ9UBE8 527 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 POMT2Q9UKY4 750 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 ZNF490Q9ULM2 529 aaPredicted RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 DAPP1Q9UN19 280 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 MGAT4BQ9UQ53 548 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 POFUT2Q9Y2G5 429 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 GSTK1Q9Y2Q3 226 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 SLC6A5Q9Y345 797 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 PCDHA10Q9Y5I2 948 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 UBIAD1Q9Y5Z9 338 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 CDH10Q9Y6N8 788 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 CREBBPQ92793 2442 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 ASXL3Q9C0F0 2248 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 TRABD2BA6NFA1 517 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 ANKDD1BA6NHY2 528 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 ARGFXA6NJG6 315 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 LRRC72A6NJI9 287 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 C2CD4DB7Z1M9 353 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 TEX46H3BTG2 121 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 DNASE2O00115 360 aaPredicted RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 CDC7O00311 574 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 PER2O15055 1255 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 AKAP8O43823 692 aaKnown RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 SELENOFO60613 162 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 EIF1BO60739 113 aaKnown RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 GPX5O75715 221 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 CCNB2O95067 398 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 DCNP07585 359 aaKnown RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 ZNF806P0C7X5 589 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 LINC00032P0C843 101 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 JUPP14923 745 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 WARSP23381 471 aaKnown RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 POU1F1P28069 291 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 NMBRP28336 390 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 HOXA9P31269 272 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 EIF1P41567 113 aaKnown RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 SLC1A2P43004 574 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 ZFP36L2P47974 494 aaKnown RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 CLCN4P51793 760 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 NR0B1P51843 470 aaKnown RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 GEMP55040 296 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 DIO3P55073 304 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 UFM1P61960 85 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 DHODHQ02127 395 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 ABHD18Q0P651 414 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 MLLT11Q13015 90 aaPredicted RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 HNRNPA0Q13151 305 aaKnown RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 NCF4Q15080 339 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 PGM5Q15124 567 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 FCN2Q15485 313 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 SMAD1Q15797 465 aaKnown RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 MICBQ29980 383 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 AP5B1Q2VPB7 878 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 RNF212Q495C1 297 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 IQCCQ4KMZ1 466 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 ZNF628Q5EBL2 1059 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 ZNF57Q68EA5 555 aaPredicted RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 LAIR1Q6GTX8 287 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 ZER1Q7Z7L7 766 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 TMEM179BQ7Z7N9 219 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms