RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 TRIP6Q15654 476 aaKnown RBP9.03□□□□□ -0.96
POLR1A-202ENST00000409024 EXT1Q16394 746 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 ZIK1Q3SY52 487 aaPredicted RBP9.03□□□□□ -0.96
POLR1A-202ENST00000409024 FGD3Q5JSP0 725 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 PDZK1Q5T2W1 519 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 TMEM154Q6P9G4 183 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 FAM198BQ6UWH4 519 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 HSDL2Q6YN16 418 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 PLEKHM3Q6ZWE6 761 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 RRM2BQ7LG56 351 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 COMTD1Q86VU5 262 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 RBM45Q8IUH3 476 aaKnown RBP9.03□□□□□ -0.96
POLR1A-202ENST00000409024 MISPQ8IVT2 679 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 C9orf40Q8IXQ3 194 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 DEPDC4Q8N2C3 294 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 AQP11Q8NBQ7 271 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 OR2Y1Q8NGV0 311 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 OR52J3Q8NH60 311 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 WDR36Q8NI36 951 aaKnown RBP9.03□□□□□ -0.96
POLR1A-202ENST00000409024 SLC7A13Q8TCU3 470 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 GNPDA2Q8TDQ7 276 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 ADAMTS16Q8TE57 1224 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 DOK4Q8TEW6 326 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 HDAC2Q92769 488 aaKnown RBP9.03□□□□□ -0.96
POLR1A-202ENST00000409024 MR1Q95460 341 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 SLC41A3Q96GZ6 507 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 MUS81Q96NY9 551 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 MRPS26Q9BYN8 205 aaKnown RBP9.03□□□□□ -0.96
POLR1A-202ENST00000409024 UCK2Q9BZX2 261 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 SPRY4Q9C004 299 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 NXF5Q9H1B4 397 aaKnown RBP9.03□□□□□ -0.96
POLR1A-202ENST00000409024 SOX17Q9H6I2 414 aaPredicted RBP9.03□□□□□ -0.96
POLR1A-202ENST00000409024 MAN2C1Q9NTJ4 1040 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 FBXO34Q9NWN3 711 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 KCNE5Q9UJ90 142 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 BLOC1S6Q9UL45 172 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 PADI1Q9ULC6 663 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 DTX4Q9Y2E6 619 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 GMPPBQ9Y5P6 360 aa9.03□□□□□ -0.96
POLR1A-202ENST00000409024 COL27A1Q8IZC6 1860 aaPredicted RBP9.02□□□□□ -0.96
POLR1A-202ENST00000409024 TRBV4-1A0A0J9YWV2 114 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 OR6C70A6NIJ9 312 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 J3QKU1 62 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 PEX12O00623 359 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 PLD2O14939 933 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 EIF4E2O60573 245 aaKnown RBP9.02□□□□□ -0.97
POLR1A-202ENST00000409024 TSPAN2O60636 221 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 TPST2O60704 377 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 CSO75390 466 aaKnown RBP9.02□□□□□ -0.97
POLR1A-202ENST00000409024 ZFAND5O76080 213 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 STK17BO94768 372 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 DLGAP3O95886 979 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 CSTAP01040 98 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 IGF2P01344 180 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 GASTP01350 101 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 CCDC159P0C7I6 412 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 UBTFL6P0CB48 400 aaPredicted RBP9.02□□□□□ -0.97
POLR1A-202ENST00000409024 ZNF28P17035 718 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 IL12BP29460 328 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 RBM34P42696 430 aaKnown RBP9.02□□□□□ -0.97
POLR1A-202ENST00000409024 SLC6A8P48029 635 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 SLC26A5P58743 744 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 ISL1P61371 349 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 RPP38P78345 283 aaKnown RBP9.02□□□□□ -0.97
POLR1A-202ENST00000409024 OR1Q1Q15612 314 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 PGBD2Q6P3X8 592 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 PODNL1Q6PEZ8 512 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 PAPD4Q6PIY7 484 aaKnown RBP9.02□□□□□ -0.97
POLR1A-202ENST00000409024 C6orf15Q6UXA7 325 aaPredicted RBP9.02□□□□□ -0.97
POLR1A-202ENST00000409024 MBOAT2Q6ZWT7 520 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 OLIG3Q7RTU3 272 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 GDF7Q7Z4P5 450 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 SLCO6A1Q86UG4 719 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 PRSS58Q8IYP2 241 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 SLC43A2Q8N370 569 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 APCDD1LQ8NCL9 501 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 LSM14AQ8ND56 463 aaKnown RBP9.02□□□□□ -0.97
POLR1A-202ENST00000409024 FAM71CQ8NEG0 241 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 OR4N2Q8NGD1 307 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 OR4K5Q8NGD3 323 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 PIGXQ8TBF5 258 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 M1APQ8TC57 530 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 DNAJA4Q8WW22 397 aaPredicted RBP9.02□□□□□ -0.97
POLR1A-202ENST00000409024 TRUB1Q8WWH5 349 aaKnown RBP9.02□□□□□ -0.97
POLR1A-202ENST00000409024 ZNF566Q969W8 418 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 WDR77Q9BQA1 342 aaPredicted RBP9.02□□□□□ -0.97
POLR1A-202ENST00000409024 WFDC6Q9BQY6 131 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 ZNF700Q9H0M5 742 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 ING2Q9H160 280 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 RIBC2Q9H4K1 309 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 C12orf10Q9HB07 376 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 RLIMQ9NVW2 624 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 DNAJB12Q9NXW2 375 aaKnown RBP9.02□□□□□ -0.97
POLR1A-202ENST00000409024 NDUFA13Q9P0J0 144 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 TMEM5Q9Y2B1 443 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 B3GALT1Q9Y5Z6 326 aa9.02□□□□□ -0.97
POLR1A-202ENST00000409024 A0A087WUU8 490 aa9.01□□□□□ -0.97
POLR1A-202ENST00000409024 A0A087WXM4 84 aa9.01□□□□□ -0.97
POLR1A-202ENST00000409024 TRIM64CA6NLI5 447 aa9.01□□□□□ -0.97
POLR1A-202ENST00000409024 CPSF4LA6NMK7 179 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms