RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 ADAMDEC1O15204 470 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 GMFGO60234 142 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 EIF4E2O60573 245 aaKnown RBP8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 STX11O75558 287 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 RAF1P04049 648 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 GUSBP08236 651 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 UBL4AP11441 157 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 POU2F1P14859 743 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 EFNA1P20827 205 aaPredicted RBP8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 BGNP21810 368 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 MATN1P21941 496 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 ARRB2P32121 409 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 KHKP50053 298 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 SUCLG1P53597 346 aaKnown RBP8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 SLC18A1P54219 525 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 CLDN20P56880 219 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 RIPPLY3P57055 190 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 PPP2R2AP63151 447 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 HBA1P69905 142 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 SIRPAP78324 504 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 CBFBQ13951 182 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 KEAP1Q14145 624 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 RNPS1Q15287 305 aaKnown RBP8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 TESK1Q15569 626 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 TNFAIP8L3Q5GJ75 292 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 CCNJQ5T5M9 372 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 OGFOD2Q6N063 350 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 PAMR1Q6UXH9 720 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 APOOLQ6UXV4 268 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 GALNT10Q86SR1 603 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 GGNQ86UU5 652 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 TMCO5AQ8N6Q1 288 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 ZNF614Q8N883 585 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 OR4A15Q8NGL6 344 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 TMEM234Q8WY98 164 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 FIG4Q92562 907 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 CPNE4Q96A23 557 aaPredicted RBP8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 MRGPRX4Q96LA9 322 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 KLHL15Q96M94 604 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 RNF145Q96MT1 663 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 ALPK1Q96QP1 1244 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 OR7D2Q96RA2 312 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 PAIP2Q9BPZ3 127 aaKnown RBP8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 MED18Q9BUE0 208 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 RTN4RQ9BZR6 473 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 NMUR2Q9GZQ4 415 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 MEAF6Q9HAF1 191 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 GP6Q9HCN6 339 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 GPATCH2Q9NW75 528 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 TESMINQ9Y4I5 508 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 DTNAQ9Y4J8 743 aa8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 SPIN1Q9Y657 262 aaPredicted RBP8.17□□□□□ -1.1
SNORD88A-201ENST00000408314 B4DXG7 233 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 E9PBE3 544 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 C16orf97H3BN30 126 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 ZNF264O43296 627 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 ITM2AO43736 263 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 SS18L1O75177 396 aaPredicted RBP8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 LINGO3P0C6S8 592 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 UQCRC2P22695 453 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 SLC7A1P30825 629 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 S100A3P33764 101 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 CHI3L1P36222 383 aaPredicted RBP8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 MAGEA8P43361 318 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 KIR2DL2P43627 348 aaPredicted RBP8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 CCR4P51679 360 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 IST1P53990 364 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 ZNF117Q03924 483 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 SELENBP1Q13228 472 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 SNTB1Q13884 538 aaKnown RBP8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 KLHL26Q53HC5 615 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 HBMQ6B0K9 141 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 OR4F3Q6IEY1 312 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 VWA1Q6PCB0 445 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 BEND4Q6ZU67 534 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 EIF3MQ7L2H7 374 aaKnown RBP8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 C6orf120Q7Z4R8 191 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 SPATA19Q7Z5L4 167 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 MED12LQ86YW9 2145 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 ANKRD42Q8N9B4 389 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 GLB1L3Q8NCI6 653 aaPredicted RBP8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 OR5M1Q8NGP8 315 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 OR10D3Q8NH80 312 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 OR5AK3PQ8NH89 298 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 LINC01560Q8TB33 94 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 MIPOL1Q8TD10 442 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 SLC25A43Q8WUT9 341 aaPredicted RBP8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 ST8SIA1Q92185 356 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 MBD6Q96DN6 1003 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 STARD4Q96DR4 205 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 ARSGQ96EG1 525 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 OTUB1Q96FW1 271 aaPredicted RBP8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 NUF2Q9BZD4 464 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 OR10A4Q9H209 315 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 ZNF395Q9H8N7 513 aaPredicted RBP8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 SERINC1Q9NRX5 453 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 THAP1Q9NVV9 213 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 SLC35A3Q9Y2D2 325 aa8.16□□□□□ -1.1
SNORD88A-201ENST00000408314 KIAA1549Q9HCM3 1950 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 CSMD1Q96PZ7 3565 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms