RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 ATOH8Q96SQ7 321 aa12.21□□□□□ -0.45
RNF43-201ENST00000407977 LMF2Q9BU23 707 aaKnown RBP12.21□□□□□ -0.45
RNF43-201ENST00000407977 ZNF416Q9BWM5 594 aa12.21□□□□□ -0.45
RNF43-201ENST00000407977 BOCQ9BWV1 1114 aa12.21□□□□□ -0.45
RNF43-201ENST00000407977 CNTNAP3Q9BZ76 1288 aa12.21□□□□□ -0.45
RNF43-201ENST00000407977 A8MVJ9 347 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 GABRPO00591 440 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 ANKRD28O15084 1053 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 AGPAT2O15120 278 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 PFKMP08237 780 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 CX3CR1P49238 355 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 EIF2B1Q14232 305 aaKnown RBP12.21□□□□□ -0.46
RNF43-201ENST00000407977 MELKQ14680 651 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 SLC46A3Q7Z3Q1 461 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 RETREG3Q86VR2 466 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 STEAP2Q8NFT2 490 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 OR1S1Q8NH92 325 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 OR1F2PQ96R84 312 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 C16orf70Q9BSU1 422 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 METTL17Q9H7H0 456 aaPredicted RBP12.21□□□□□ -0.46
RNF43-201ENST00000407977 PRDM9Q9NQV7 894 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 IER3IP1Q9Y5U9 82 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 MYH7BA7E2Y1 1941 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 SLC22A23A1A5C7 686 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 DCDC2BA2VCK2 349 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 RFXAPO00287 272 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 PROS1P07225 676 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 BMP1P13497 986 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 RAB6AP20340 208 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 SSTR2P30874 369 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 CD79BP40259 229 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 MAP4K2Q12851 820 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 SSX2Q16385 188 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 SULF2Q8IWU5 870 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 CYB561A3Q8NBI2 242 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 OR4M1Q8NGD0 313 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 TANKQ92844 425 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 TOMM40LQ969M1 308 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 BPIFA2Q96DR5 249 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 NAA50Q9GZZ1 169 aaKnown RBP12.21□□□□□ -0.46
RNF43-201ENST00000407977 IL26Q9NPH9 171 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 SLC35A3Q9Y2D2 325 aa12.21□□□□□ -0.46
RNF43-201ENST00000407977 MYH8P13535 1937 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 SHOXO15266 292 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 DPM1O60762 260 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 PDGFAP04085 211 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 SNRNP70P08621 437 aaKnown RBP12.2□□□□□ -0.46
RNF43-201ENST00000407977 C6P13671 934 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 ZNF26P17031 533 aaPredicted RBP12.2□□□□□ -0.46
RNF43-201ENST00000407977 PKLRP30613 574 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 GATMP50440 423 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 SIM1P81133 766 aaPredicted RBP12.2□□□□□ -0.46
RNF43-201ENST00000407977 HTD2P86397 168 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 KCNIP4Q6PIL6 250 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 MRPL41Q8IXM3 137 aaKnown RBP12.2□□□□□ -0.46
RNF43-201ENST00000407977 IL17RCQ8NAC3 791 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 BRI3BPQ8WY22 251 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 TBC1D20Q96BZ9 403 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 C4orf36Q96KX1 117 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 RCE1Q9Y256 329 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 IGKV6D-21A0A0A0MT36 114 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 TOR1AO14656 332 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 SLC16A6O15403 523 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 UBL3O95164 117 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 HNRNPA1P09651 372 aaKnown RBP eCLIP12.2□□□□□ -0.46
RNF43-201ENST00000407977 ACPPP15309 386 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 FAPQ12884 760 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 GPR139Q6DWJ6 353 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 RCBTB1Q8NDN9 531 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 IL17RDQ8NFM7 739 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 ASB17Q8WXJ9 295 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 SHDQ96IW2 340 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 SLC19A3Q9BZV2 496 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 OR52D1Q9H346 318 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 PLCXD1Q9NUJ7 323 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 IL20RAQ9UHF4 553 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 ZNF225Q9UK10 706 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 SPO11Q9Y5K1 396 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 B3GALT1Q9Y5Z6 326 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 CIB4A0PJX0 185 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 GJE1A6NN92 205 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 HHLA1C9JL84 531 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 ARHGAP33O14559 1287 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 FZD7O75084 574 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 HOXC8P31273 242 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 DDOSTP39656 456 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 MTNR1BP49286 362 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 ZXDBP98169 803 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 GRM7Q14831 915 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 SYT6Q5T7P8 510 aaPredicted RBP12.2□□□□□ -0.46
RNF43-201ENST00000407977 CARD17Q5XLA6 110 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 APOOLQ6UXV4 268 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 GRASPQ7Z6J2 395 aaPredicted RBP12.2□□□□□ -0.46
RNF43-201ENST00000407977 OR5T1Q8NG75 326 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 SLC2A12Q8TD20 617 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 C3orf30Q96M34 536 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 PLEKHJ1Q9NW61 149 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 GABRR3A8MPY1 467 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 A8MU76 341 aa12.2□□□□□ -0.46
RNF43-201ENST00000407977 HTR3BO95264 441 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms