RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 ADGRL4Q9HBW9 690 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 RBFOX1Q9NWB1 397 aaKnown RBP9.13□□□□□ -0.95
MSH2-202ENST00000406134 SLC22A7Q9Y694 548 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 MYO9BQ13459 2157 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 CDHR4A6H8M9 788 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 PRR23AA6NEV1 266 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 HCN1O60741 890 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 PTP4A3O75365 173 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 NDUFV2P19404 249 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 CPN2P22792 545 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 SEC13P55735 322 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 RGS8P57771 180 aaPredicted RBP9.13□□□□□ -0.95
MSH2-202ENST00000406134 BDH1Q02338 343 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 MRPL2Q5T653 305 aaKnown RBP9.13□□□□□ -0.95
MSH2-202ENST00000406134 IL20RBQ6UXL0 311 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 USP53Q70EK8 1073 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 CXXC5Q7LFL8 322 aaKnown RBP9.13□□□□□ -0.95
MSH2-202ENST00000406134 C16orf62Q7Z3J2 963 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 NOXA1Q86UR1 476 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 TRIM48Q8IWZ4 208 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 LNX2Q8N448 690 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 OR2T33Q8NG76 320 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 OR51G2Q8NGK0 314 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 PHOSPHO2Q8TCD6 241 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 MYADMQ96S97 322 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 KXD1Q9BQD3 176 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 ZNF426Q9BUY5 554 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 PAQR5Q9NXK6 330 aaPredicted RBP9.13□□□□□ -0.95
MSH2-202ENST00000406134 GDE1Q9NZC3 331 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 FLRT3Q9NZU0 649 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 PCOLCE2Q9UKZ9 415 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 PCDHGB7Q9Y5F8 929 aa9.13□□□□□ -0.95
MSH2-202ENST00000406134 EPOPA6NHQ4 379 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 ERVH48-1M5A8F1 160 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 CYR61O00622 381 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 CASKO14936 926 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 FGF17O60258 216 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 CA3P07451 260 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 SRSF5Q13243 272 aaKnown RBP9.12□□□□□ -0.95
MSH2-202ENST00000406134 PRICKLE4Q2TBC4 344 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 TJAP1Q5JTD0 557 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 PARM1Q6UWI2 310 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 KLHL36Q8N4N3 616 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 CTHRC1Q96CG8 243 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 FRMD6Q96NE9 622 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 CCDC86Q9H6F5 360 aaKnown RBP9.12□□□□□ -0.95
MSH2-202ENST00000406134 MTHFD2LQ9H903 347 aaPredicted RBP9.12□□□□□ -0.95
MSH2-202ENST00000406134 SIDT1Q9NXL6 827 aaKnown RBP9.12□□□□□ -0.95
MSH2-202ENST00000406134 ANKRD10Q9NXR5 420 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 OR6C2Q9NZP2 312 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 SIGLEC7Q9Y286 467 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 C12orf71A8MTZ7 269 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 GUCY1B2O75343 617 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 PAHP00439 452 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 CMPK1P30085 196 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 MAP2K3P46734 347 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 ID2Q02363 134 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 OR1Q1Q15612 314 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 GARNL3Q5VVW2 1013 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 METAP1DQ6UB28 335 aaPredicted RBP9.12□□□□□ -0.95
MSH2-202ENST00000406134 ASPGQ86U10 573 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 OR13C2Q8NGS9 318 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 ZNRF4Q8WWF5 429 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 ALG8Q9BVK2 526 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 C19orf53Q9UNZ5 99 aaPredicted RBP9.12□□□□□ -0.95
MSH2-202ENST00000406134 TP53BP1Q12888 1972 aaPredicted RBP9.12□□□□□ -0.95
MSH2-202ENST00000406134 SLC2A2P11168 524 aaPredicted RBP9.12□□□□□ -0.95
MSH2-202ENST00000406134 CPMP14384 443 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 PTBP1P26599 531 aaKnown RBP eCLIP9.12□□□□□ -0.953e-8■■■■■ 62.7
MSH2-202ENST00000406134 EVI2BP34910 448 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 RPS15AP62244 130 aaKnown RBP9.12□□□□□ -0.95
MSH2-202ENST00000406134 PLA1AQ53H76 456 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 FCRLBQ6BAA4 426 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 MEPCEQ7L2J0 689 aaKnown RBP9.12□□□□□ -0.95
MSH2-202ENST00000406134 GJD3Q8N144 294 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 RAB42Q8N4Z0 105 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 ASCC1Q8N9N2 400 aaKnown RBP9.12□□□□□ -0.95
MSH2-202ENST00000406134 OR5T3Q8NGG3 340 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 BMFQ96LC9 184 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 COQ7Q99807 217 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 GABRG3Q99928 467 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 SFXN1Q9H9B4 322 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 CALML5Q9NZT1 146 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 WDR45Q9Y484 360 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 ZNF780BQ9Y6R6 833 aa9.12□□□□□ -0.95
MSH2-202ENST00000406134 TBC1D3KA0A087X1G2 549 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 GXYLT2A0PJZ3 443 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 TBC1D3FA6NER0 549 aaPredicted RBP9.11□□□□□ -0.95
MSH2-202ENST00000406134 TGFBR3LH3BV60 316 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 LINC01565O15544 149 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 AKAP8O43823 692 aaKnown RBP9.11□□□□□ -0.95
MSH2-202ENST00000406134 LDB3O75112 727 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 IGKV1D-16P01601 117 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 ATP1B1P05026 303 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 NID1P14543 1247 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 SHC1P29353 583 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 IFNGR2P38484 337 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 CD83Q01151 205 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 TNK1Q13470 666 aa9.11□□□□□ -0.95
MSH2-202ENST00000406134 FAM53BQ14153 422 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms