RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 TYW3Q6IPR3 259 aaKnown RBP9.62□□□□□ -0.87
RPAIN-204ENST00000405578 FRRS1Q6ZNA5 592 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 EIF3MQ7L2H7 374 aaKnown RBP9.62□□□□□ -0.87
RPAIN-204ENST00000405578 PLCZ1Q86YW0 608 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 PGAM4Q8N0Y7 254 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 ZFP62Q8NB50 900 aaPredicted RBP9.62□□□□□ -0.87
RPAIN-204ENST00000405578 OR2T12Q8NG77 320 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 OR4K17Q8NGC6 315 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 NFKBIDQ8NI38 313 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 PHOSPHO1Q8TCT1 267 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 MAL2Q969L2 176 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 TREX2Q9BQ50 279 aaPredicted RBP9.62□□□□□ -0.87
RPAIN-204ENST00000405578 GPATCH1Q9BRR8 931 aaKnown RBP9.62□□□□□ -0.87
RPAIN-204ENST00000405578 SAP130Q9H0E3 1048 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 IKZF5Q9H5V7 419 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 GALNT9Q9HCQ5 603 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 BCL2L10Q9HD36 194 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.62□□□□□ -0.87
RPAIN-204ENST00000405578 FBXO34Q9NWN3 711 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 ADA2Q9NZK5 511 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 SLC13A4Q9UKG4 626 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 SLC35A3Q9Y2D2 325 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 IFT52Q9Y366 437 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 DTNAQ9Y4J8 743 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 PRORSD1PA6NEY8 169 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 SERINC4A6NH21 518 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 AGAP5A6NIR3 686 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 SNPHO15079 494 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 GSTA4O15217 222 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 TRIM3O75382 744 aaPredicted RBP9.61□□□□□ -0.87
RPAIN-204ENST00000405578 UGT2B17O75795 530 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 ATP5HO75947 161 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 PGM3O95394 542 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 IFNA14P01570 189 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 CHRM4P08173 479 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 NUDT7P0C024 238 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 ETS2P15036 469 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 TDGF1P3P51864 188 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 ART1P52961 327 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 EEFSECP57772 596 aaKnown RBP9.61□□□□□ -0.87
RPAIN-204ENST00000405578 PPIAP62937 165 aaKnown RBP9.61□□□□□ -0.87
RPAIN-204ENST00000405578 TLE4Q04727 773 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 LIPEQ05469 1076 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 FUT5Q11128 374 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 VEZF1Q14119 521 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 SELPLGQ14242 412 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 TOMM20Q15388 145 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 VMACQ2NL98 169 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 SPATS1Q496A3 300 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 LIN52Q52LA3 116 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 KLHL26Q53HC5 615 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 SAMD4BQ5PRF9 694 aaKnown RBP9.61□□□□□ -0.87
RPAIN-204ENST00000405578 PDZK1Q5T2W1 519 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 AP1ARQ63HQ0 302 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 BICRALQ6AI39 1079 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 DESI1Q6ICB0 168 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 RPTNQ6XPR3 784 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 NET1Q7Z628 596 aaPredicted RBP9.61□□□□□ -0.87
RPAIN-204ENST00000405578 ZAR1Q86SH2 424 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 PATL1Q86TB9 770 aaKnown RBP9.61□□□□□ -0.87
RPAIN-204ENST00000405578 MARCH3Q86UD3 253 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 IFNEQ86WN2 208 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 CMIPQ8IY22 773 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 BHLHE22Q8NFJ8 381 aaPredicted RBP9.61□□□□□ -0.87
RPAIN-204ENST00000405578 DUSP19Q8WTR2 217 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 FRMD6Q96NE9 622 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 TTTY12Q9BZ98 90 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 SLC38A1Q9H2H9 487 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 PIF1Q9H611 641 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 DEPPQ9NTK1 212 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 QPCTLQ9NXS2 382 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 TUBA8Q9NY65 449 aaPredicted RBP9.61□□□□□ -0.87
RPAIN-204ENST00000405578 SH3BGRL2Q9UJC5 107 aa9.61□□□□□ -0.87
RPAIN-204ENST00000405578 CPAMD8Q8IZJ3 1885 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 NPIPA5A0A0B4J1W7 369 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 A0A0G2JMM0 328 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 A0A1W2PPB8 328 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 A0A1W2PRS3 328 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 ELOVL7A1L3X0 281 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 PRAMEF27A3QJZ7 478 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 KIR3DP1A8MWS1 328 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 FAM220BPB1ANY3 271 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 NPIPA7E9PJI5 369 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 NPIPB9F8W1W9 429 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 EBAG9O00559 213 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 GNB5O14775 395 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 ZNF264O43296 627 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 HCRTR2O43614 444 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 EIF4E2O60573 245 aaKnown RBP9.6□□□□□ -0.87
RPAIN-204ENST00000405578 TRAPPC6AO75865 159 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 UBOX5O94941 541 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 CSTAP01040 98 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 THBS1P07996 1170 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 NPIPA8P0DM63 369 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 UBL4AP11441 157 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 CD99P14209 185 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 UQCRBP14927 111 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 GDF1P27539 372 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 PCGF2P35227 344 aa9.6□□□□□ -0.87
RPAIN-204ENST00000405578 ADH7P40394 386 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms