RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 ITPKBP27987 946 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 HTR2AP28223 471 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 ZNF136P52737 540 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 SMIM11AP58511 58 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 COPZ1P61923 177 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 PLAURQ03405 335 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 ST3GAL3Q11203 375 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 ATP1A4Q13733 1029 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 FGFBP1Q14512 234 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 OR1Q1Q15612 314 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 RSPO4Q2I0M5 234 aaPredicted RBP3.41□□□□□ -1.86
RTN4-208ENST00000404909 KLHL26Q53HC5 615 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 NHSL2Q5HYW2 709 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 BICRALQ6AI39 1079 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 PLAG1Q6DJT9 500 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 PODNL1Q6PEZ8 512 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 CBLN3Q6UW01 205 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 ZNF730Q6ZMV8 503 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 VASH2Q86V25 355 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 NKAIN4Q8IVV8 208 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 DHRSXQ8N5I4 330 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 SIRT6Q8N6T7 355 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 AQP11Q8NBQ7 271 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 C17orf47Q8NEP4 570 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 OR4C15Q8NGM1 316 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 ELP5Q8TE02 316 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 ADAMTS14Q8WXS8 1223 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 NKD1Q969G9 470 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 TP53INP1Q96A56 240 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 NRBF2Q96F24 287 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 IMMP1LQ96LU5 166 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 NIPSNAP1Q9BPW8 284 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 GPR87Q9BY21 358 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 RTN4RQ9BZR6 473 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 TMEM27Q9HBJ8 222 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 C8orf4Q9NR00 106 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 KCND3Q9UK17 655 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 RAB26Q9ULW5 256 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 PPIEQ9UNP9 301 aaKnown RBP3.41□□□□□ -1.86
RTN4-208ENST00000404909 HEATR5AQ86XA9 2040 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 CHD8Q9HCK8 2581 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 MGAQ8IWI9 3026 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 A0A1W2PRQ8 180 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 MAN1A2O60476 641 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 TSPAN2O60636 221 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 DPM1O60762 260 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 PPM1BO75688 479 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 GASTP01350 101 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 ITGAMP11215 1152 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 UBL4AP11441 157 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 TBXA2RP21731 343 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 POU1F1P28069 291 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 EPHA2P29317 976 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 EVI2BP34910 448 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 PNLIPRP2P54317 469 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 RAD23AP54725 363 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 TPD52P55327 224 aaPredicted RBP3.4□□□□□ -1.86
RTN4-208ENST00000404909 KCNAB2Q13303 367 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 DGCR6Q14129 220 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 WLSQ5T9L3 541 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 KRT80Q6KB66 452 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 IL20RBQ6UXL0 311 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 TMPRSS7Q7RTY8 843 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 GDF7Q7Z4P5 450 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 MRGPREQ86SM8 312 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 P3H2Q8IVL5 708 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 PIK3C3Q8NEB9 887 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 ZNF555Q8NEP9 628 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 OR10G3Q8NGC4 313 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 OR4K5Q8NGD3 323 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 OR8K3Q8NH51 312 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 SLC22A8Q8TCC7 542 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 TMEM255BQ8WV15 326 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 TFAP2CQ92754 450 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 SLC38A4Q969I6 547 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 RELTQ969Z4 430 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 KIAA1143Q96AT1 154 aaPredicted RBP3.4□□□□□ -1.86
RTN4-208ENST00000404909 RASL10BQ96S79 203 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 CDCP1Q9H5V8 836 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 GALNT9Q9HCQ5 603 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 MAN2C1Q9NTJ4 1040 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 ANKRD10Q9NXR5 420 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 KLRF1Q9NZS2 232 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 RPS6KB2Q9UBS0 482 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 TMEFF2Q9UIK5 374 aaPredicted RBP3.4□□□□□ -1.86
RTN4-208ENST00000404909 ACAD8Q9UKU7 415 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 PCDHGB5Q9Y5G0 923 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 MED12Q93074 2177 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 MED13Q9UHV7 2174 aa3.4□□□□□ -1.86
RTN4-208ENST00000404909 TRAPPC13A5PLN9 417 aa3.4□□□□□ -1.87
RTN4-208ENST00000404909 OR6C70A6NIJ9 312 aa3.4□□□□□ -1.87
RTN4-208ENST00000404909 H0YJX3 145 aa3.4□□□□□ -1.87
RTN4-208ENST00000404909 FAAHO00519 579 aa3.4□□□□□ -1.87
RTN4-208ENST00000404909 ZNF264O43296 627 aa3.4□□□□□ -1.87
RTN4-208ENST00000404909 OIP5O43482 229 aa3.4□□□□□ -1.87
RTN4-208ENST00000404909 ANGPTL1O95841 491 aa3.4□□□□□ -1.87
RTN4-208ENST00000404909 HPRP00739 348 aa3.4□□□□□ -1.87
RTN4-208ENST00000404909 THY1P04216 161 aa3.4□□□□□ -1.87
RTN4-208ENST00000404909 ANXA8P13928 327 aa3.4□□□□□ -1.87
RTN4-208ENST00000404909 SPINK2P20155 84 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms