RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 BHLHB9Q6PI77 547 aa14.25□□□□□ -0.13
ATG4B-203ENST00000400772 OLIG3Q7RTU3 272 aa14.25□□□□□ -0.13
ATG4B-203ENST00000400772 BTLAQ7Z6A9 289 aa14.25□□□□□ -0.13
ATG4B-203ENST00000400772 MTERF4Q7Z6M4 381 aaKnown RBP14.25□□□□□ -0.13
ATG4B-203ENST00000400772 WDR75Q8IWA0 830 aaKnown RBP14.25□□□□□ -0.13
ATG4B-203ENST00000400772 CHDHQ8NE62 594 aaPredicted RBP14.25□□□□□ -0.13
ATG4B-203ENST00000400772 OR4A15Q8NGL6 344 aa14.25□□□□□ -0.13
ATG4B-203ENST00000400772 PHOSPHO1Q8TCT1 267 aa14.25□□□□□ -0.13
ATG4B-203ENST00000400772 RNF145Q96MT1 663 aa14.25□□□□□ -0.13
ATG4B-203ENST00000400772 WDR55Q9H6Y2 383 aaPredicted RBP14.25□□□□□ -0.13
ATG4B-203ENST00000400772 KCNE5Q9UJ90 142 aa14.25□□□□□ -0.13
ATG4B-203ENST00000400772 CARD8Q9Y2G2 431 aa14.25□□□□□ -0.13
ATG4B-203ENST00000400772 SPG11Q96JI7 2443 aa14.25□□□□□ -0.13
ATG4B-203ENST00000400772 RNF103-CHMP3A0A140T963 221 aa14.24□□□□□ -0.13
ATG4B-203ENST00000400772 EIF1AYO14602 144 aaKnown RBP14.24□□□□□ -0.13
ATG4B-203ENST00000400772 MSTNO14793 375 aa14.24□□□□□ -0.13
ATG4B-203ENST00000400772 ADAMDEC1O15204 470 aa14.24□□□□□ -0.13
ATG4B-203ENST00000400772 FCMRO60667 390 aa14.24□□□□□ -0.13
ATG4B-203ENST00000400772 CPSF4O95639 269 aaKnown RBP14.24□□□□□ -0.13
ATG4B-203ENST00000400772 CGAP01215 116 aa14.24□□□□□ -0.13
ATG4B-203ENST00000400772 C1QCP02747 245 aa14.24□□□□□ -0.13
ATG4B-203ENST00000400772 DNAJA1P31689 397 aaKnown RBP14.24□□□□□ -0.13
ATG4B-203ENST00000400772 SLC6A8P48029 635 aa14.24□□□□□ -0.13
ATG4B-203ENST00000400772 ZNF41P51814 821 aaPredicted RBP14.24□□□□□ -0.13
ATG4B-203ENST00000400772 NME5P56597 212 aa14.24□□□□□ -0.13
ATG4B-203ENST00000400772 RPS3AP61247 264 aaKnown RBP14.24□□□□□ -0.13
ATG4B-203ENST00000400772 RAC1P63000 192 aa14.24□□□□□ -0.13
ATG4B-203ENST00000400772 TOMM34Q15785 309 aaPredicted RBP14.24□□□□□ -0.13
ATG4B-203ENST00000400772 NDUFAF6Q330K2 333 aa14.24□□□□□ -0.13
ATG4B-203ENST00000400772 ANXA8L1Q5VT79 327 aa14.24□□□□□ -0.13
ATG4B-203ENST00000400772 ZNF474Q6S9Z5 364 aaPredicted RBP14.24□□□□□ -0.13
ATG4B-203ENST00000400772 CNEP1R1Q8N9A8 125 aa14.24□□□□□ -0.13
ATG4B-203ENST00000400772 ZNF527Q8NB42 609 aa14.24□□□□□ -0.13
ATG4B-203ENST00000400772 MIPOL1Q8TD10 442 aa14.24□□□□□ -0.13
ATG4B-203ENST00000400772 SLC35G5Q96KT7 338 aa14.24□□□□□ -0.13
ATG4B-203ENST00000400772 POLDIP3Q9BY77 421 aaKnown RBP14.24□□□□□ -0.13
ATG4B-203ENST00000400772 CLEC4MQ9H2X3 399 aaPredicted RBP14.24□□□□□ -0.13
ATG4B-203ENST00000400772 OR51I1Q9H343 314 aa14.24□□□□□ -0.13
ATG4B-203ENST00000400772 LIME1Q9H400 295 aa14.24□□□□□ -0.13
ATG4B-203ENST00000400772 AIG1Q9NVV5 245 aa14.24□□□□□ -0.13
ATG4B-203ENST00000400772 MARCOQ9UEW3 520 aaPredicted RBP14.24□□□□□ -0.13
ATG4B-203ENST00000400772 DTNAQ9Y4J8 743 aa14.24□□□□□ -0.13
ATG4B-203ENST00000400772 A0A0J9YW62 118 aa14.23□□□□□ -0.13
ATG4B-203ENST00000400772 GOLGA8QA0A0J9YX86 632 aa14.23□□□□□ -0.13
ATG4B-203ENST00000400772 CENPVL1A0A0U1RR11 272 aa14.23□□□□□ -0.13
ATG4B-203ENST00000400772 GOLGA8OA6NCC3 632 aa14.23□□□□□ -0.13
ATG4B-203ENST00000400772 DUXAA6NLW8 204 aa14.23□□□□□ -0.13
ATG4B-203ENST00000400772 E9PBE3 544 aa14.23□□□□□ -0.13
ATG4B-203ENST00000400772 GOLGA8NF8WBI6 632 aa14.23□□□□□ -0.13
ATG4B-203ENST00000400772 HDAC3O15379 428 aa14.23□□□□□ -0.13
ATG4B-203ENST00000400772 KITP10721 976 aa14.23□□□□□ -0.13
ATG4B-203ENST00000400772 UQCRC2P22695 453 aa14.23□□□□□ -0.13
ATG4B-203ENST00000400772 EPHA3P29320 983 aa14.23□□□□□ -0.13
ATG4B-203ENST00000400772 SHC1P29353 583 aa14.23□□□□□ -0.13
ATG4B-203ENST00000400772 EIF1AXP47813 144 aaKnown RBP14.23□□□□□ -0.13
ATG4B-203ENST00000400772 CPA2P48052 419 aa14.23□□□□□ -0.13
ATG4B-203ENST00000400772 P2RX1P51575 399 aa14.23□□□□□ -0.13
ATG4B-203ENST00000400772 CLNS1AP54105 237 aaKnown RBP14.23□□□□□ -0.13
ATG4B-203ENST00000400772 SIRPAP78324 504 aa14.23□□□□□ -0.13
ATG4B-203ENST00000400772 FAM27E3Q08E93 113 aa14.23□□□□□ -0.13
ATG4B-203ENST00000400772 FOXF1Q12946 379 aa14.23□□□□□ -0.13
ATG4B-203ENST00000400772 SGCBQ16585 318 aa14.23□□□□□ -0.13
ATG4B-203ENST00000400772 ARHGAP11BQ3KRB8 267 aa14.23□□□□□ -0.13
ATG4B-203ENST00000400772 FAM174BQ3ZCQ3 159 aa14.23□□□□□ -0.13
ATG4B-203ENST00000400772 SAXO2Q658L1 398 aa14.23□□□□□ -0.13
ATG4B-203ENST00000400772 HEPHL1Q6MZM0 1159 aa14.23□□□□□ -0.13
ATG4B-203ENST00000400772 OR10D3Q8NH80 312 aa14.23□□□□□ -0.13
ATG4B-203ENST00000400772 GPR119Q8TDV5 335 aa14.23□□□□□ -0.13
ATG4B-203ENST00000400772 NMUR2Q9GZQ4 415 aa14.23□□□□□ -0.13
ATG4B-203ENST00000400772 OPN3Q9H1Y3 402 aaPredicted RBP14.23□□□□□ -0.13
ATG4B-203ENST00000400772 TMEM185BQ9H7F4 350 aa14.23□□□□□ -0.13
ATG4B-203ENST00000400772 MANSC1Q9H8J5 431 aa14.23□□□□□ -0.13
ATG4B-203ENST00000400772 PCDHGB4Q9UN71 923 aa14.23□□□□□ -0.13
ATG4B-203ENST00000400772 GPR45Q9Y5Y3 372 aa14.23□□□□□ -0.13
ATG4B-203ENST00000400772 ANKHD1Q8IWZ3 2542 aaKnown RBP14.23□□□□□ -0.13
ATG4B-203ENST00000400772 CCDC168Q8NDH2 2452 aa14.23□□□□□ -0.13
ATG4B-203ENST00000400772 C9JVG2 144 aa14.22□□□□□ -0.13
ATG4B-203ENST00000400772 ZNF195O14628 629 aa14.22□□□□□ -0.13
ATG4B-203ENST00000400772 TNFSF11O14788 317 aa14.22□□□□□ -0.13
ATG4B-203ENST00000400772 SMNDC1O75940 238 aaKnown RBP eCLIP14.22□□□□□ -0.13
ATG4B-203ENST00000400772 OR12D1P0DN82 309 aa14.22□□□□□ -0.13
ATG4B-203ENST00000400772 S100A3P33764 101 aa14.22□□□□□ -0.13
ATG4B-203ENST00000400772 GPR68Q15743 365 aa14.22□□□□□ -0.13
ATG4B-203ENST00000400772 ZNF141Q15928 474 aa14.22□□□□□ -0.13
ATG4B-203ENST00000400772 DPY19L1Q2PZI1 675 aa14.22□□□□□ -0.13
ATG4B-203ENST00000400772 PDZK1Q5T2W1 519 aa14.22□□□□□ -0.13
ATG4B-203ENST00000400772 AP1ARQ63HQ0 302 aa14.22□□□□□ -0.13
ATG4B-203ENST00000400772 ATG16L1Q676U5 607 aa14.22□□□□□ -0.13
ATG4B-203ENST00000400772 MAVSQ7Z434 540 aa14.22□□□□□ -0.13
ATG4B-203ENST00000400772 SPATA19Q7Z5L4 167 aa14.22□□□□□ -0.13
ATG4B-203ENST00000400772 CDC20BQ86Y33 519 aa14.22□□□□□ -0.13
ATG4B-203ENST00000400772 VPS37AQ8NEZ2 397 aa14.22□□□□□ -0.13
ATG4B-203ENST00000400772 FBXO27Q8NI29 283 aa14.22□□□□□ -0.13
ATG4B-203ENST00000400772 RAB3IL1Q8TBN0 382 aa14.22□□□□□ -0.13
ATG4B-203ENST00000400772 ARL8AQ96BM9 186 aa14.22□□□□□ -0.13
ATG4B-203ENST00000400772 MAELQ96JY0 434 aaKnown RBP14.22□□□□□ -0.13
ATG4B-203ENST00000400772 CCDC115Q96NT0 180 aa14.22□□□□□ -0.13
ATG4B-203ENST00000400772 DACH2Q96NX9 599 aa14.22□□□□□ -0.13
ATG4B-203ENST00000400772 ZNF350Q9GZX5 532 aa14.22□□□□□ -0.13
ATG4B-203ENST00000400772 NKIRAS1Q9NYS0 192 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms