RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 ATOH1Q92858 354 aaPredicted RBP13.06□□□□□ -0.32
SCAF4-202ENST00000399804 ZFP3Q96NJ6 502 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 NDRG4Q9ULP0 352 aaKnown RBP13.06□□□□□ -0.32
SCAF4-202ENST00000399804 IER3IP1Q9Y5U9 82 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 KCNE3Q9Y6H6 103 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 CACNA1EQ15878 2313 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 ZNF670-ZNF695F2Z2N8 137 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 IGFBP1P08833 259 aaPredicted RBP13.06□□□□□ -0.32
SCAF4-202ENST00000399804 ACVR1BP36896 505 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 NDUFAF6Q330K2 333 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 OR5M10Q6IEU7 315 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 NKAIN4Q8IVV8 208 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 NEIL3Q8TAT5 605 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 TMEM255BQ8WV15 326 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 CNOT9Q92600 299 aaKnown RBP13.06□□□□□ -0.32
SCAF4-202ENST00000399804 C7orf34Q96L11 122 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 PHOX2BQ99453 314 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 TAS2R16Q9NYV7 291 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 PPP4R1LQ9P1A2 415 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 PSORS1C1Q9UIG5 152 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 SLC35A3Q9Y2D2 325 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 NTNG1Q9Y2I2 539 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 TSC22D4Q9Y3Q8 395 aa13.06□□□□□ -0.32
SCAF4-202ENST00000399804 GPC6Q9Y625 555 aaPredicted RBP13.06□□□□□ -0.32
SCAF4-202ENST00000399804 GVINP1Q7Z2Y8 2422 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 A0A087WUU8 490 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 A0A1W2PRQ8 180 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 BLACEA4D250 179 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 SERPINA3P01011 423 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 HBQ1P09105 142 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 PRKAR1AP10644 381 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 ZFP36L2P47974 494 aaKnown RBP13.05□□□□□ -0.32
SCAF4-202ENST00000399804 BTBD16Q32M84 506 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 TRIM61Q5EBN2 209 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 ZNF425Q6IV72 752 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 B3GLCTQ6Y288 498 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 ABI3BPQ7Z7G0 1075 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 CA13Q8N1Q1 262 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 UXS1Q8NBZ7 420 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 DIO2Q92813 273 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 OR6C1Q96RD1 312 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 STRADBQ9C0K7 418 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 NRSN2Q9GZP1 204 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 TRPV5Q9NQA5 729 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 CNOT2Q9NZN8 540 aaKnown RBP13.05□□□□□ -0.32
SCAF4-202ENST00000399804 CKLFQ9UBR5 152 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 RBMX2Q9Y388 322 aaKnown RBP13.05□□□□□ -0.32
SCAF4-202ENST00000399804 ZNF726A6NNF4 738 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 FAM171A2A8MVW0 826 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 TP53I11O14683 189 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 ZNF749O43361 778 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 SCRG1O75711 98 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 C1QCP02747 245 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 CSF2P04141 144 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 GYPBP06028 91 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 NME1P15531 152 aaKnown RBP13.05□□□□□ -0.32
SCAF4-202ENST00000399804 GRPRP30550 384 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 TBCEQ15813 527 aaPredicted RBP13.05□□□□□ -0.32
SCAF4-202ENST00000399804 PGGHGQ32M88 737 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 GDF7Q7Z4P5 450 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 SFTPA2Q8IWL1 248 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 OR13F1Q8NGS4 319 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 OR13C2Q8NGS9 318 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 BCL2L10Q9HD36 194 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 TESQ9UGI8 421 aaKnown RBP13.05□□□□□ -0.32
SCAF4-202ENST00000399804 A0A1W2PPK0 400 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 PRKNO60260 465 aaPredicted RBP13.05□□□□□ -0.32
SCAF4-202ENST00000399804 PLGP00747 810 aaPredicted RBP13.05□□□□□ -0.32
SCAF4-202ENST00000399804 F8A1P23610 371 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 HSD17B7P56937 341 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 GPAT4Q86UL3 456 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 TM9SF2Q99805 663 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 SEMA4GQ9NTN9 838 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 WNT16Q9UBV4 365 aa13.05□□□□□ -0.32
SCAF4-202ENST00000399804 PLOD3O60568 738 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 MAGEA2P43356 314 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 RCBTB1Q8NDN9 531 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 ZMYND19Q96E35 227 aaPredicted RBP13.04□□□□□ -0.32
SCAF4-202ENST00000399804 S100A13Q99584 98 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 SIDT1Q9NXL6 827 aaKnown RBP13.04□□□□□ -0.32
SCAF4-202ENST00000399804 LAMP5Q9UJQ1 280 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 A0A1B0GWA3 101 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 NSA2O95478 260 aaKnown RBP13.04□□□□□ -0.32
SCAF4-202ENST00000399804 CPNE6O95741 557 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 CD2P06729 351 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 RGS6P49758 472 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 WNT4P56705 351 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 PCBP4P57723 403 aaKnown RBP13.04□□□□□ -0.32
SCAF4-202ENST00000399804 OR12D2P58182 307 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 GPLD1P80108 840 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 AGERQ15109 404 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 PRAMEF8Q5VWM4 474 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 PRAMEF7Q5VXH5 474 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 MED25Q71SY5 747 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 PRICKLE2Q7Z3G6 844 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 ZER1Q7Z7L7 766 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 NT5CQ8TCD5 201 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 MUL1Q969V5 352 aa13.04□□□□□ -0.32
SCAF4-202ENST00000399804 ELF4Q99607 663 aaPredicted RBP13.04□□□□□ -0.32
SCAF4-202ENST00000399804 GAL3ST1Q99999 423 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms