RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 OR10H3O60404 316 aa9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 TFP02787 698 aa9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 PCCBP05166 539 aa9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 DCNP07585 359 aaKnown RBP9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 ANXA5P08758 320 aa9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 H2AFB1P0C5Y9 115 aa9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 ACP2P11117 423 aa9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 ATP5A1P25705 553 aaKnown RBP9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 CALCRP30988 508 aa9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 TRIM23P36406 574 aa9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 CSNK1DP48730 415 aa9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 CTSCP53634 463 aa9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 LIM2P55344 173 aa9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 CLDN2P57739 230 aa9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 CDK6Q00534 326 aa9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 DEFA5Q01523 94 aa9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 RAB40BQ12829 278 aa9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 SP140Q13342 867 aa9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 PIP5KL1Q5T9C9 394 aa9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 ANXA8L1Q5VT79 327 aa9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 AGBL4Q5VU57 503 aa9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 FRG2Q64ET8 278 aa9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 VRK3Q8IV63 474 aa9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 ZBTB2Q8N680 514 aa9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 MAFAQ8NHW3 353 aaPredicted RBP9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 CNOT9Q92600 299 aaKnown RBP9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 FRG2BQ96QU4 278 aa9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 DMRTA2Q96SC8 542 aa9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 SPATA5L1Q9BVQ7 753 aa9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 MRPS18AQ9NVS2 196 aaKnown RBP9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 PLCL2Q9UPR0 1127 aa9.46□□□□□ -0.9
HMGCLL1-205ENST00000398661 TCRBV21S2A2A0A5A6 115 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 IRGMA1A4Y4 181 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 SERTM1A2A2V5 107 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 SIGLEC5O15389 551 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 PRNPP04156 253 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 GLAP06280 429 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 LIMS3P0CW19 117 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 LIMS4P0CW20 117 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 NFYAP23511 347 aaPredicted RBP9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 NTSR1P30989 418 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 SPAM1P38567 509 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 PPP2CBP62714 309 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 PPP2CAP67775 309 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 EEF1A2Q05639 463 aaKnown RBP9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 SIGLEC14Q08ET2 396 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 HLXQ14774 488 aaPredicted RBP9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 RNASE12Q5GAN4 147 aaKnown RBP9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 DCST1Q5T197 706 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 GPRC6AQ5T6X5 926 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 PYHIN1Q6K0P9 492 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 SLC27A4Q6P1M0 643 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 ERN2Q76MJ5 926 aaKnown RBP9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 SHFQ7M4L6 423 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 PRICKLE2Q7Z3G6 844 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 NR2C2APQ86WQ0 139 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 SLC30A8Q8IWU4 369 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 PDZD9Q8IXQ8 264 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 CMIPQ8IY22 773 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 SAMD12Q8N8I0 201 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 L3MBTL4Q8NA19 623 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 OR56B4Q8NH76 319 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 OR1S1Q8NH92 325 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 C11orf24Q96F05 449 aaPredicted RBP9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 NKX6-2Q9C056 277 aaPredicted RBP9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 ACTR6Q9GZN1 396 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 EMC3Q9P0I2 261 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 RPS6KB2Q9UBS0 482 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 CTSFQ9UBX1 484 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 ERVK-19Q9WJR5 959 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 CHST2Q9Y4C5 530 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 TECTAO75443 2155 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 TBC1D3DA0A087WVF3 549 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 TBC1D3IA0A087WXS9 549 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 TBC1D3EA0A087X179 549 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 TBC1D3KA0A087X1G2 549 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 TBC1D3FA6NER0 549 aaPredicted RBP9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 TBC1D3LB9A6J9 549 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 MCRIP1C9JLW8 97 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 FAAHO00519 579 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 SULT1B1O43704 296 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 CD3GP09693 182 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 TBC1D3HP0C7X1 549 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 OR12D1P0DN82 309 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 ZNF7P17097 686 aaPredicted RBP9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 NDUFV2P19404 249 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 CELP19835 753 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 NPR2P20594 1047 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 ELAVL4P26378 380 aaKnown RBP9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 MAPK8P45983 427 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 PREPP48147 710 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 RAB13P51153 203 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 POLR2LP62875 67 aaKnown RBP9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 TDGQ13569 410 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 CCINQ13939 588 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 PUM1Q14671 1186 aaKnown RBP eCLIP9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 B3GNTL1Q67FW5 361 aaPredicted RBP9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 HBMQ6B0K9 141 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 TBC1D3GQ6DHY5 549 aa9.45□□□□□ -0.9
HMGCLL1-205ENST00000398661 TBC1D3CQ6IPX1 549 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms