RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 RELTQ969Z4 430 aa14.29□□□□□ -0.12
MBD1-207ENST00000398488 KAT8Q9H7Z6 458 aaKnown RBP14.29□□□□□ -0.12
MBD1-207ENST00000398488 VDAC3Q9Y277 283 aa14.29□□□□□ -0.12
MBD1-207ENST00000398488 MRPS18CQ9Y3D5 142 aaKnown RBP14.29□□□□□ -0.12
MBD1-207ENST00000398488 HEATR5AQ86XA9 2040 aa14.28□□□□□ -0.12
MBD1-207ENST00000398488 BBIP1A8MTZ0 92 aa14.28□□□□□ -0.12
MBD1-207ENST00000398488 AIM2O14862 343 aa14.28□□□□□ -0.12
MBD1-207ENST00000398488 GCM2O75603 506 aaPredicted RBP14.28□□□□□ -0.12
MBD1-207ENST00000398488 IL11P20809 199 aa14.28□□□□□ -0.12
MBD1-207ENST00000398488 PPIBP23284 216 aaKnown RBP14.28□□□□□ -0.12
MBD1-207ENST00000398488 RBPJQ06330 500 aa14.28□□□□□ -0.12
MBD1-207ENST00000398488 SKP2Q13309 424 aa14.28□□□□□ -0.12
MBD1-207ENST00000398488 MAPRE2Q15555 327 aa14.28□□□□□ -0.12
MBD1-207ENST00000398488 NHSL2Q5HYW2 709 aa14.28□□□□□ -0.12
MBD1-207ENST00000398488 RTL6Q6ICC9 239 aa14.28□□□□□ -0.12
MBD1-207ENST00000398488 MTERF4Q7Z6M4 381 aaKnown RBP14.28□□□□□ -0.12
MBD1-207ENST00000398488 ZNF527Q8NB42 609 aa14.28□□□□□ -0.12
MBD1-207ENST00000398488 FAM71CQ8NEG0 241 aa14.28□□□□□ -0.12
MBD1-207ENST00000398488 CNOT9Q92600 299 aaKnown RBP14.28□□□□□ -0.12
MBD1-207ENST00000398488 WDYHV1Q96HA8 205 aa14.28□□□□□ -0.12
MBD1-207ENST00000398488 THUMPD3Q9BV44 507 aaKnown RBP14.28□□□□□ -0.12
MBD1-207ENST00000398488 PIF1Q9H611 641 aa14.28□□□□□ -0.12
MBD1-207ENST00000398488 MTHFD2LQ9H903 347 aaPredicted RBP14.28□□□□□ -0.12
MBD1-207ENST00000398488 MED17Q9NVC6 651 aa14.28□□□□□ -0.12
MBD1-207ENST00000398488 RLIMQ9NVW2 624 aa14.28□□□□□ -0.12
MBD1-207ENST00000398488 ACAD8Q9UKU7 415 aa14.28□□□□□ -0.12
MBD1-207ENST00000398488 OR2M5A3KFT3 312 aa14.27□□□□□ -0.12
MBD1-207ENST00000398488 H0YC42 278 aa14.27□□□□□ -0.12
MBD1-207ENST00000398488 GTPBP1O00178 669 aaKnown RBP14.27□□□□□ -0.12
MBD1-207ENST00000398488 CCL21O00585 134 aa14.27□□□□□ -0.12
MBD1-207ENST00000398488 ZNF264O43296 627 aa14.27□□□□□ -0.12
MBD1-207ENST00000398488 EFNA2O43921 213 aa14.27□□□□□ -0.12
MBD1-207ENST00000398488 CYP7B1O75881 506 aa14.27□□□□□ -0.12
MBD1-207ENST00000398488 PGM3O95394 542 aa14.27□□□□□ -0.12
MBD1-207ENST00000398488 FAM107AO95990 144 aa14.27□□□□□ -0.12
MBD1-207ENST00000398488 LINGO3P0C6S8 592 aa14.27□□□□□ -0.12
MBD1-207ENST00000398488 UBTFL6P0CB48 400 aaPredicted RBP14.27□□□□□ -0.12
MBD1-207ENST00000398488 UBL4AP11441 157 aa14.27□□□□□ -0.12
MBD1-207ENST00000398488 PSMA4P25789 261 aaKnown RBP14.27□□□□□ -0.12
MBD1-207ENST00000398488 ADH7P40394 386 aa14.27□□□□□ -0.12
MBD1-207ENST00000398488 TPD52P55327 224 aaPredicted RBP14.27□□□□□ -0.12
MBD1-207ENST00000398488 CLDN15P56746 228 aa14.27□□□□□ -0.12
MBD1-207ENST00000398488 KCNJ10P78508 379 aa14.27□□□□□ -0.12
MBD1-207ENST00000398488 HPCAP84074 193 aa14.27□□□□□ -0.12
MBD1-207ENST00000398488 ZNF630Q2M218 657 aaPredicted RBP14.27□□□□□ -0.12
MBD1-207ENST00000398488 PLPPR5Q32ZL2 321 aa14.27□□□□□ -0.12
MBD1-207ENST00000398488 C4orf17Q53FE4 359 aa14.27□□□□□ -0.12
MBD1-207ENST00000398488 PLXDC2Q6UX71 529 aa14.27□□□□□ -0.12
MBD1-207ENST00000398488 COMTD1Q86VU5 262 aa14.27□□□□□ -0.12
MBD1-207ENST00000398488 MISPQ8IVT2 679 aa14.27□□□□□ -0.12
MBD1-207ENST00000398488 ZZZ3Q8IYH5 903 aa14.27□□□□□ -0.12
MBD1-207ENST00000398488 CLIP4Q8N3C7 705 aa14.27□□□□□ -0.12
MBD1-207ENST00000398488 OR10A6Q8NH74 314 aa14.27□□□□□ -0.12
MBD1-207ENST00000398488 GPR119Q8TDV5 335 aa14.27□□□□□ -0.12
MBD1-207ENST00000398488 ABTB1Q969K4 478 aaPredicted RBP14.27□□□□□ -0.12
MBD1-207ENST00000398488 LAT2Q9GZY6 243 aa14.27□□□□□ -0.12
MBD1-207ENST00000398488 RAD21L1Q9H4I0 556 aa14.27□□□□□ -0.12
MBD1-207ENST00000398488 BCL2L10Q9HD36 194 aa14.27□□□□□ -0.12
MBD1-207ENST00000398488 MRGBPQ9NV56 204 aa14.27□□□□□ -0.12
MBD1-207ENST00000398488 ARL8BQ9NVJ2 186 aa14.27□□□□□ -0.12
MBD1-207ENST00000398488 ZNF337Q9Y3M9 751 aa14.27□□□□□ -0.12
MBD1-207ENST00000398488 KIAA1549Q9HCM3 1950 aa14.27□□□□□ -0.12
MBD1-207ENST00000398488 MYO7BQ6PIF6 2116 aa14.27□□□□□ -0.13
MBD1-207ENST00000398488 OR14I1A6ND48 311 aa14.26□□□□□ -0.13
MBD1-207ENST00000398488 EVPLLA8MZ36 301 aa14.26□□□□□ -0.13
MBD1-207ENST00000398488 CSTAP01040 98 aa14.26□□□□□ -0.13
MBD1-207ENST00000398488 SLC6A2P23975 617 aa14.26□□□□□ -0.13
MBD1-207ENST00000398488 MSX1P28360 303 aa14.26□□□□□ -0.13
MBD1-207ENST00000398488 CPA2P48052 419 aa14.26□□□□□ -0.13
MBD1-207ENST00000398488 LHX2P50458 406 aa14.26□□□□□ -0.13
MBD1-207ENST00000398488 P2RX1P51575 399 aa14.26□□□□□ -0.13
MBD1-207ENST00000398488 CRISP3P54108 245 aa14.26□□□□□ -0.13
MBD1-207ENST00000398488 CDK6Q00534 326 aa14.26□□□□□ -0.13
MBD1-207ENST00000398488 C8orf82Q6P1X6 216 aaPredicted RBP14.26□□□□□ -0.13
MBD1-207ENST00000398488 ZNF585AQ6P3V2 769 aa14.26□□□□□ -0.13
MBD1-207ENST00000398488 ZNF836Q6ZNA1 936 aa14.26□□□□□ -0.13
MBD1-207ENST00000398488 NET1Q7Z628 596 aaPredicted RBP14.26□□□□□ -0.13
MBD1-207ENST00000398488 IFNEQ86WN2 208 aa14.26□□□□□ -0.13
MBD1-207ENST00000398488 CALHM3Q86XJ0 350 aa14.26□□□□□ -0.13
MBD1-207ENST00000398488 OR52P1PQ8NH57 321 aa14.26□□□□□ -0.13
MBD1-207ENST00000398488 FBXO27Q8NI29 283 aa14.26□□□□□ -0.13
MBD1-207ENST00000398488 SARAFQ96BY9 339 aa14.26□□□□□ -0.13
MBD1-207ENST00000398488 SFXN2Q96NB2 322 aa14.26□□□□□ -0.13
MBD1-207ENST00000398488 DMRTA2Q96SC8 542 aa14.26□□□□□ -0.13
MBD1-207ENST00000398488 GPATCH1Q9BRR8 931 aaKnown RBP14.26□□□□□ -0.13
MBD1-207ENST00000398488 TMEM38AQ9H6F2 299 aa14.26□□□□□ -0.13
MBD1-207ENST00000398488 PTGES2Q9H7Z7 377 aa14.26□□□□□ -0.13
MBD1-207ENST00000398488 CMTM6Q9NX76 183 aa14.26□□□□□ -0.13
MBD1-207ENST00000398488 SUCOQ9UBS9 1254 aaKnown RBP14.26□□□□□ -0.13
MBD1-207ENST00000398488 SLC5A6Q9Y289 635 aa14.26□□□□□ -0.13
MBD1-207ENST00000398488 FAM215AQ9Y5M1 114 aa14.26□□□□□ -0.13
MBD1-207ENST00000398488 COL12A1Q99715 3063 aa14.26□□□□□ -0.13
MBD1-207ENST00000398488 A0A0G2JPF8 293 aa14.25□□□□□ -0.13
MBD1-207ENST00000398488 HNRNPCL2B2RXH8 293 aa14.25□□□□□ -0.13
MBD1-207ENST00000398488 HNRNPCL3B7ZW38 293 aa14.25□□□□□ -0.13
MBD1-207ENST00000398488 H3BNH8 94 aa14.25□□□□□ -0.13
MBD1-207ENST00000398488 AP3D1O14617 1153 aa14.25□□□□□ -0.13
MBD1-207ENST00000398488 PRRG2O14669 202 aa14.25□□□□□ -0.13
MBD1-207ENST00000398488 BCKDKO14874 412 aa14.25□□□□□ -0.13
MBD1-207ENST00000398488 EIF4E2O60573 245 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms