RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 ZNF597Q96LX8 424 aa21.55■■□□□ 1.04
TSPAN4-203ENST00000397397 RNF145Q96MT1 663 aa21.55■■□□□ 1.04
TSPAN4-203ENST00000397397 FRMD6Q96NE9 622 aa21.55■■□□□ 1.04
TSPAN4-203ENST00000397397 RLIMQ9NVW2 624 aa21.55■■□□□ 1.04
TSPAN4-203ENST00000397397 RPS6KA6Q9UK32 745 aa21.55■■□□□ 1.04
TSPAN4-203ENST00000397397 CARD8Q9Y2G2 431 aa21.55■■□□□ 1.04
TSPAN4-203ENST00000397397 CHST2Q9Y4C5 530 aa21.55■■□□□ 1.04
TSPAN4-203ENST00000397397 IGSF10Q6WRI0 2623 aa21.54■■□□□ 1.04
TSPAN4-203ENST00000397397 CDHR4A6H8M9 788 aa21.54■■□□□ 1.04
TSPAN4-203ENST00000397397 PINLYPA6NC86 204 aa21.54■■□□□ 1.04
TSPAN4-203ENST00000397397 ACOT8O14734 319 aa21.54■■□□□ 1.04
TSPAN4-203ENST00000397397 SNPHO15079 494 aa21.54■■□□□ 1.04
TSPAN4-203ENST00000397397 ZNF264O43296 627 aa21.54■■□□□ 1.04
TSPAN4-203ENST00000397397 SUV39H1O43463 412 aa21.54■■□□□ 1.04
TSPAN4-203ENST00000397397 OIP5O43482 229 aa21.54■■□□□ 1.04
TSPAN4-203ENST00000397397 BCAS1O75363 584 aaPredicted RBP21.54■■□□□ 1.04
TSPAN4-203ENST00000397397 CIB2O75838 187 aa21.54■■□□□ 1.04
TSPAN4-203ENST00000397397 UBTFL6P0CB48 400 aaPredicted RBP21.54■■□□□ 1.04
TSPAN4-203ENST00000397397 ZSWIM7Q19AV6 140 aa21.54■■□□□ 1.04
TSPAN4-203ENST00000397397 LCN8Q6JVE9 175 aa21.54■■□□□ 1.04
TSPAN4-203ENST00000397397 CBLL1Q75N03 491 aa21.54■■□□□ 1.04
TSPAN4-203ENST00000397397 PNPLA5Q7Z6Z6 429 aaPredicted RBP21.54■■□□□ 1.04
TSPAN4-203ENST00000397397 FAM98AQ8NCA5 519 aaKnown RBP21.54■■□□□ 1.04
TSPAN4-203ENST00000397397 GPR32P1Q8NGA4 272 aa21.54■■□□□ 1.04
TSPAN4-203ENST00000397397 OR1J4Q8NGS1 313 aa21.54■■□□□ 1.04
TSPAN4-203ENST00000397397 LZICQ8WZA0 190 aa21.54■■□□□ 1.04
TSPAN4-203ENST00000397397 TPD52L3Q96J77 140 aa21.54■■□□□ 1.04
TSPAN4-203ENST00000397397 LRGUKQ96M69 825 aa21.54■■□□□ 1.04
TSPAN4-203ENST00000397397 RAB3IPQ96QF0 476 aaPredicted RBP21.54■■□□□ 1.04
TSPAN4-203ENST00000397397 SLC25A18Q9H1K4 315 aa21.54■■□□□ 1.04
TSPAN4-203ENST00000397397 HHATLQ9HCP6 504 aa21.54■■□□□ 1.04
TSPAN4-203ENST00000397397 DCAF13Q9NV06 445 aaKnown RBP21.54■■□□□ 1.04
TSPAN4-203ENST00000397397 BOKQ9UMX3 212 aaPredicted RBP21.54■■□□□ 1.04
TSPAN4-203ENST00000397397 HCRTR2O43614 444 aa21.53■■□□□ 1.04
TSPAN4-203ENST00000397397 GMFGO60234 142 aa21.53■■□□□ 1.04
TSPAN4-203ENST00000397397 EIF4E2O60573 245 aaKnown RBP21.53■■□□□ 1.04
TSPAN4-203ENST00000397397 FESP07332 822 aa21.53■■□□□ 1.04
TSPAN4-203ENST00000397397 NQO1P15559 274 aaKnown RBP21.53■■□□□ 1.04
TSPAN4-203ENST00000397397 SELENOWP63302 87 aa21.53■■□□□ 1.04
TSPAN4-203ENST00000397397 ZNF117Q03924 483 aa21.53■■□□□ 1.04
TSPAN4-203ENST00000397397 PLEKHN1Q494U1 663 aaPredicted RBP21.53■■□□□ 1.04
TSPAN4-203ENST00000397397 NADK2Q4G0N4 442 aa21.53■■□□□ 1.04
TSPAN4-203ENST00000397397 SLC6A19Q695T7 634 aa21.53■■□□□ 1.04
TSPAN4-203ENST00000397397 EID3Q8N140 333 aa21.53■■□□□ 1.04
TSPAN4-203ENST00000397397 TMCO5AQ8N6Q1 288 aa21.53■■□□□ 1.04
TSPAN4-203ENST00000397397 OR10Q1Q8NGQ4 319 aa21.53■■□□□ 1.04
TSPAN4-203ENST00000397397 B4GALNT2Q8NHY0 566 aa21.53■■□□□ 1.04
TSPAN4-203ENST00000397397 TRIM15Q9C019 465 aa21.53■■□□□ 1.04
TSPAN4-203ENST00000397397 LAT2Q9GZY6 243 aa21.53■■□□□ 1.04
TSPAN4-203ENST00000397397 KLHL28Q9NXS3 571 aa21.53■■□□□ 1.04
TSPAN4-203ENST00000397397 DNAJB12Q9NXW2 375 aaKnown RBP21.53■■□□□ 1.04
TSPAN4-203ENST00000397397 MED11Q9P086 117 aa21.53■■□□□ 1.04
TSPAN4-203ENST00000397397 BAG5Q9UL15 447 aa21.53■■□□□ 1.04
TSPAN4-203ENST00000397397 HRH3Q9Y5N1 445 aa21.53■■□□□ 1.04
TSPAN4-203ENST00000397397 PRB1P04280 392 aa21.52■■□□□ 1.04
TSPAN4-203ENST00000397397 PLAURQ03405 335 aa21.52■■□□□ 1.04
TSPAN4-203ENST00000397397 LY6DQ14210 128 aa21.52■■□□□ 1.04
TSPAN4-203ENST00000397397 FLOT2Q14254 428 aa21.52■■□□□ 1.04
TSPAN4-203ENST00000397397 MTX3Q5HYI7 312 aa21.52■■□□□ 1.04
TSPAN4-203ENST00000397397 TIGD3Q6B0B8 471 aa21.52■■□□□ 1.04
TSPAN4-203ENST00000397397 ZNF771Q7L3S4 317 aaPredicted RBP21.52■■□□□ 1.04
TSPAN4-203ENST00000397397 COMTD1Q86VU5 262 aa21.52■■□□□ 1.04
TSPAN4-203ENST00000397397 PLCZ1Q86YW0 608 aa21.52■■□□□ 1.04
TSPAN4-203ENST00000397397 GRAMD2AQ8IUY3 354 aa21.52■■□□□ 1.04
TSPAN4-203ENST00000397397 WDSUB1Q8N9V3 476 aa21.52■■□□□ 1.04
TSPAN4-203ENST00000397397 FAM71CQ8NEG0 241 aa21.52■■□□□ 1.04
TSPAN4-203ENST00000397397 OR4K17Q8NGC6 315 aa21.52■■□□□ 1.04
TSPAN4-203ENST00000397397 OR52E4Q8NGH9 312 aa21.52■■□□□ 1.04
TSPAN4-203ENST00000397397 SLC39A7Q92504 469 aa21.52■■□□□ 1.04
TSPAN4-203ENST00000397397 PROX1Q92786 737 aa21.52■■□□□ 1.04
TSPAN4-203ENST00000397397 DSN1Q9H410 356 aa21.52■■□□□ 1.04
TSPAN4-203ENST00000397397 ZFP64Q9NPA5 681 aa21.52■■□□□ 1.04
TSPAN4-203ENST00000397397 SAMD4AQ9UPU9 718 aaKnown RBP21.52■■□□□ 1.04
TSPAN4-203ENST00000397397 IGLV3-32A0A0A0MS00 114 aa21.51■■□□□ 1.03
TSPAN4-203ENST00000397397 TMEM229AB2RXF0 380 aa21.51■■□□□ 1.03
TSPAN4-203ENST00000397397 SYT5O00445 386 aa21.51■■□□□ 1.03
TSPAN4-203ENST00000397397 EPPINO95925 133 aa21.51■■□□□ 1.03
TSPAN4-203ENST00000397397 LGI1O95970 557 aa21.51■■□□□ 1.03
TSPAN4-203ENST00000397397 RFC3P40938 356 aa21.51■■□□□ 1.03
TSPAN4-203ENST00000397397 CCR4P51679 360 aa21.51■■□□□ 1.03
TSPAN4-203ENST00000397397 PLGLB1Q02325 96 aa21.51■■□□□ 1.03
TSPAN4-203ENST00000397397 FOXO1Q12778 655 aa21.51■■□□□ 1.03
TSPAN4-203ENST00000397397 SKP2Q13309 424 aa21.51■■□□□ 1.03
TSPAN4-203ENST00000397397 C1orf146Q5VVC0 180 aa21.51■■□□□ 1.03
TSPAN4-203ENST00000397397 CBLN3Q6UW01 205 aa21.51■■□□□ 1.03
TSPAN4-203ENST00000397397 PNPLA2Q96AD5 504 aa21.51■■□□□ 1.03
TSPAN4-203ENST00000397397 WBP1Q96G27 269 aa21.51■■□□□ 1.03
TSPAN4-203ENST00000397397 OLAHQ9NV23 265 aa21.51■■□□□ 1.03
TSPAN4-203ENST00000397397 LUZP4Q9P127 313 aa21.51■■□□□ 1.03
TSPAN4-203ENST00000397397 V9GYQ6 96 aa21.51■■□□□ 1.03
TSPAN4-203ENST00000397397 SMG1Q96Q15 3661 aaKnown RBP21.5■■□□□ 1.03
TSPAN4-203ENST00000397397 LRRC3CA6NJW4 275 aa21.5■■□□□ 1.03
TSPAN4-203ENST00000397397 FRS3O43559 492 aa21.5■■□□□ 1.03
TSPAN4-203ENST00000397397 C8BP07358 591 aa21.5■■□□□ 1.03
TSPAN4-203ENST00000397397 ELAVL4P26378 380 aaKnown RBP21.5■■□□□ 1.03
TSPAN4-203ENST00000397397 MSX1P28360 303 aa21.5■■□□□ 1.03
TSPAN4-203ENST00000397397 P2RX1P51575 399 aa21.5■■□□□ 1.03
TSPAN4-203ENST00000397397 VTCN1Q7Z7D3 282 aa21.5■■□□□ 1.03
TSPAN4-203ENST00000397397 ZNF440Q8IYI8 595 aa21.5■■□□□ 1.03
TSPAN4-203ENST00000397397 FADS6Q8N9I5 356 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms