RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 CD3EP07766 207 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 PRPS2P11908 318 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 ATP5F1P24539 256 aaPredicted RBP7.8□□□□□ -1.16
CAPN3-208ENST00000397204 LCN1P31025 176 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 MAP3K8P41279 467 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 EIF1P41567 113 aaKnown RBP7.8□□□□□ -1.16
CAPN3-208ENST00000397204 RFX3P48380 749 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 HTR6P50406 440 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 ETF1P62495 437 aaKnown RBP7.8□□□□□ -1.16
CAPN3-208ENST00000397204 VEZF1Q14119 521 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 SLC29A2Q14542 456 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 P2RY6Q15077 328 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 GRAMD1BQ3KR37 738 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 GLE1Q53GS7 698 aaKnown RBP7.8□□□□□ -1.16
CAPN3-208ENST00000397204 NCMAPQ5T1S8 102 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 SFRP5Q5T4F7 317 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 HBMQ6B0K9 141 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 IKBIPQ70UQ0 350 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 GALNT10Q86SR1 603 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 TRABD2AQ86V40 505 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 OR6Y1Q8NGX8 325 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 OR4C3Q8NH37 302 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 RAB3IL1Q8TBN0 382 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 FAM110BQ8TC76 370 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 GPR151Q8TDV0 419 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 TMEM158Q8WZ71 300 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 FBXW5Q969U6 566 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 L3HYPDHQ96EM0 354 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 REXO5Q96IC2 774 aaKnown RBP7.8□□□□□ -1.16
CAPN3-208ENST00000397204 METTL2AQ96IZ6 378 aaKnown RBP7.8□□□□□ -1.16
CAPN3-208ENST00000397204 SLCO5A1Q9H2Y9 848 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 LRTM1Q9HBL6 345 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 MYNNQ9NPC7 610 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 TIGARQ9NQ88 270 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 UBQLN4Q9NRR5 601 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 FBXO34Q9NWN3 711 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 TMEM216Q9P0N5 145 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 PYCARDQ9ULZ3 195 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 TIMM22Q9Y584 194 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 RAI1Q7Z5J4 1906 aaPredicted RBP7.8□□□□□ -1.16
CAPN3-208ENST00000397204 A0A1W2PRB8 838 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 H3BQF6 201 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 CD5LO43866 347 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 GMFGO60234 142 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 GCM2O75603 506 aaPredicted RBP7.79□□□□□ -1.16
CAPN3-208ENST00000397204 PRKD3O94806 890 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 HSPA4LO95757 839 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 IGKV1D-16P01601 117 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 OPN1LWP04000 364 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 YES1P07947 543 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 SOD3P08294 240 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 AGTR1P30556 359 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 ZNF41P51814 821 aaPredicted RBP7.79□□□□□ -1.16
CAPN3-208ENST00000397204 NAA20P61599 178 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 SLC18A2Q05940 514 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 RNPS1Q15287 305 aaKnown RBP7.79□□□□□ -1.16
CAPN3-208ENST00000397204 TAB1Q15750 504 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 IMPG1Q17R60 797 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 NKAPLQ5M9Q1 402 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 TMEM201Q5SNT2 666 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 UBAP2Q5T6F2 1119 aaKnown RBP7.79□□□□□ -1.16
CAPN3-208ENST00000397204 FAM219BQ5XKK7 198 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 NOXRED1Q6NXP6 359 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 C8orf74Q6P047 294 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 DNM1P46Q6ZS02 220 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 SSX8Q7RTT4 187 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 MISPQ8IVT2 679 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 CNPY4Q8N129 248 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 LILRA2Q8N149 483 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 GABRG1Q8N1C3 465 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 CDRT4Q8N9R6 151 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 MAPK1IP1LQ8NDC0 245 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 CDC26Q8NHZ8 85 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 PIWIL2Q8TC59 973 aaKnown RBP7.79□□□□□ -1.16
CAPN3-208ENST00000397204 PIK3R3Q92569 461 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 HOXB13Q92826 284 aaPredicted RBP7.79□□□□□ -1.16
CAPN3-208ENST00000397204 S100PBPQ96BU1 408 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 ZNF764Q96H86 408 aaPredicted RBP7.79□□□□□ -1.16
CAPN3-208ENST00000397204 RNF145Q96MT1 663 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 TMEM237Q96Q45 408 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 EBPLQ9BY08 206 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 CDC42EP4Q9H3Q1 356 aaKnown RBP7.79□□□□□ -1.16
CAPN3-208ENST00000397204 L2HGDHQ9H9P8 463 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 BARX1Q9HBU1 254 aaPredicted RBP7.79□□□□□ -1.16
CAPN3-208ENST00000397204 YAE1D1Q9NRH1 226 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 MED17Q9NVC6 651 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 NTMQ9P121 344 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 LIPT1Q9Y234 373 aa7.79□□□□□ -1.16
CAPN3-208ENST00000397204 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.79□□□□□ -1.16
CAPN3-208ENST00000397204 CHD3Q12873 2000 aaKnown RBP7.78□□□□□ -1.16
CAPN3-208ENST00000397204 A0A087WUV0 522 aaPredicted RBP7.78□□□□□ -1.16
CAPN3-208ENST00000397204 A0A1W2PP18 115 aa7.78□□□□□ -1.16
CAPN3-208ENST00000397204 A0A1W2PQD3 144 aa7.78□□□□□ -1.16
CAPN3-208ENST00000397204 TNFSF11O14788 317 aa7.78□□□□□ -1.16
CAPN3-208ENST00000397204 CLOCKO15516 846 aa7.78□□□□□ -1.16
CAPN3-208ENST00000397204 OXSR1O95747 527 aaPredicted RBP7.78□□□□□ -1.16
CAPN3-208ENST00000397204 GSTA1P08263 222 aa7.78□□□□□ -1.16
CAPN3-208ENST00000397204 HPGDP15428 266 aa7.78□□□□□ -1.16
CAPN3-208ENST00000397204 EPHA1P21709 976 aa7.78□□□□□ -1.16
CAPN3-208ENST00000397204 IL32P24001 234 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms