RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 PLCZ1Q86YW0 608 aa9.62□□□□□ -0.87
NUP98-205ENST00000397007 TMEM178AQ8NBL3 297 aa9.62□□□□□ -0.87
NUP98-205ENST00000397007 C11orf65Q8NCR3 313 aa9.62□□□□□ -0.87
NUP98-205ENST00000397007 SNRNP40Q96DI7 357 aaKnown RBP9.62□□□□□ -0.87
NUP98-205ENST00000397007 NDE1Q9NXR1 346 aa9.62□□□□□ -0.87
NUP98-205ENST00000397007 SPRR3Q9UBC9 169 aa9.62□□□□□ -0.87
NUP98-205ENST00000397007 MKLN1Q9UL63 735 aa9.62□□□□□ -0.87
NUP98-205ENST00000397007 WDR45Q9Y484 360 aa9.62□□□□□ -0.87
NUP98-205ENST00000397007 LIPGQ9Y5X9 500 aa9.62□□□□□ -0.87
NUP98-205ENST00000397007 AQP7O14520 342 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 TP53I11O14683 189 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 AIM2O14862 343 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 CELA3AP09093 270 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 ADH6P28332 368 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 ANXA11P50995 505 aaKnown RBP9.61□□□□□ -0.87
NUP98-205ENST00000397007 C17orf67Q0P5P2 114 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 TRAP1Q12931 704 aaKnown RBP9.61□□□□□ -0.87
NUP98-205ENST00000397007 FLYWCH1Q4VC44 716 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 LIN52Q52LA3 116 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 POMZP3Q6PJE2 187 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 C16orf89Q6UX73 402 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 PIWIL3Q7Z3Z3 882 aaKnown RBP9.61□□□□□ -0.87
NUP98-205ENST00000397007 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.61□□□□□ -0.87
NUP98-205ENST00000397007 FAM109AQ8N4B1 249 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 POLR2J2Q9GZM3 115 aaKnown RBP9.61□□□□□ -0.87
NUP98-205ENST00000397007 POLR2J3Q9H1A7 115 aaKnown RBP9.61□□□□□ -0.87
NUP98-205ENST00000397007 IFT52Q9Y366 437 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.61□□□□□ -0.87
NUP98-205ENST00000397007 EPG5Q9HCE0 2579 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 A0A087WZY1 265 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 NPIPA5A0A0B4J1W7 369 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 NPIPA7E9PJI5 369 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 NPIPA8P0DM63 369 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 CD46P15529 392 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 CHMP24386 653 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 CRATP43155 626 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 CPA2P48052 419 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 DNASE1L1P49184 302 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 LHX2P50458 406 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 P2RX1P51575 399 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 GALNTL5Q7Z4T8 443 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 BHLHE22Q8NFJ8 381 aaPredicted RBP9.61□□□□□ -0.87
NUP98-205ENST00000397007 ASB9Q96DX5 294 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 MMADHCQ9H3L0 296 aaPredicted RBP9.61□□□□□ -0.87
NUP98-205ENST00000397007 MAN2C1Q9NTJ4 1040 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 TCRBV3S1A0A5B6 114 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 E9PQ18 207 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 CBR3O75828 277 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 PRKCAP17252 672 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 KDELR2P33947 212 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 RPP38P78345 283 aaKnown RBP9.61□□□□□ -0.87
NUP98-205ENST00000397007 ARG2P78540 354 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 GNA13Q14344 377 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 SPDYE7PQ495Y7 208 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 GTPBP8Q8N3Z3 284 aaPredicted RBP9.61□□□□□ -0.87
NUP98-205ENST00000397007 ACBD4Q8NC06 268 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 PRSS27Q9BQR3 290 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 FANCFQ9NPI8 374 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 ACTR3BQ9P1U1 418 aa9.61□□□□□ -0.87
NUP98-205ENST00000397007 ELOVL7A1L3X0 281 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 FFAR1O14842 300 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 ST13P50502 369 aaKnown RBP9.6□□□□□ -0.87
NUP98-205ENST00000397007 MNAT1P51948 309 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 DSCR4P56555 118 aaPredicted RBP9.6□□□□□ -0.87
NUP98-205ENST00000397007 SELENOWP63302 87 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 FHL1Q13642 323 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 MRPL2Q5T653 305 aaKnown RBP9.6□□□□□ -0.87
NUP98-205ENST00000397007 HLA-DQA1Q5Y7H0 255 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 VASNQ6EMK4 673 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 OR2T12Q8NG77 320 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 OR5W2Q8NH69 310 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 FAR1Q8WVX9 515 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 NR4A3Q92570 626 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 SLCO4A1Q96BD0 722 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 ATP5HO75947 161 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 CPN1P15169 458 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 ATP6V1B2P21281 511 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 FUT4P22083 530 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 ELK4P28324 431 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 IL12BP29460 328 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 P2RY4P51582 365 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 CLDN18P56856 261 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 PMP22Q01453 160 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 BCL2A1Q16548 175 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 SAMD4BQ5PRF9 694 aaKnown RBP9.6□□□□□ -0.87
NUP98-205ENST00000397007 DCST1Q5T197 706 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 FAM86B1Q8N7N1 296 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 ST6GALNAC3Q8NDV1 305 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 FAM83FQ8NEG4 500 aaPredicted RBP9.6□□□□□ -0.87
NUP98-205ENST00000397007 OR52P1PQ8NH57 321 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 WDR60Q8WVS4 1066 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 XAGE5Q8WWM1 108 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 CNOT9Q92600 299 aaKnown RBP9.6□□□□□ -0.87
NUP98-205ENST00000397007 MPDZO75970 2070 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 IGKV1D-42A0A075B6H8 117 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 WIPF3A6NGB9 483 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 B2RBV5 119 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 KLRC4-KLRK1H3BQV0 150 aa9.6□□□□□ -0.87
NUP98-205ENST00000397007 AP3D1O14617 1153 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms