RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 MYEOVQ96EZ4 313 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 SLC30A2Q9BRI3 323 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 GTPBP2Q9BX10 602 aaKnown RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 POLDIP3Q9BY77 421 aaKnown RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 FZD3Q9NPG1 666 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 HEMK1Q9Y5R4 338 aaPredicted RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 DLGAP1O14490 977 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 DHRS4L2Q6PKH6 230 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 SATL1Q86VE3 508 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 MORN4Q8NDC4 146 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 SLC41A3Q96GZ6 507 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 INPP5KQ9BT40 448 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 SLAMF8Q9P0V8 285 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 NPFFR2Q9Y5X5 522 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 A0A0G2JN53 185 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF670-ZNF695F2Z2N8 137 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 TNFRSF21O75509 655 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 IL1AP01583 271 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ARRB2P32121 409 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 SIM1P81133 766 aaPredicted RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 BDH1Q02338 343 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 SLC14A1Q13336 389 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 HACD4Q5VWC8 232 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 MAMSTRQ6ZN01 415 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 MBOAT2Q6ZWT7 520 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 C11orf24Q96F05 449 aaPredicted RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 PEX11GQ96HA9 241 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 CLEC4MQ9H2X3 399 aaPredicted RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ISYNA1Q9NPH2 558 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 SIDT1Q9NXL6 827 aaKnown RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ABCG2Q9UNQ0 655 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 RPH3AQ9Y2J0 694 aaPredicted RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ANXA2P2A6NMY6 339 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 YY2O15391 372 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ANXA2P07355 339 aaKnown RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 MYOGP15173 224 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 CELP19835 753 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 GADD45AP24522 165 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 VLDLRP98155 873 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 CNPY1Q3B7I2 92 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 TRIM61Q5EBN2 209 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ENPP6Q6UWR7 440 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 RHOXF1Q8NHV9 184 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 SNIP1Q8TAD8 396 aaKnown RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 WBP2Q969T9 261 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF587Q96SQ5 575 aaPredicted RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 IL21RQ9HBE5 538 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 FBXO4Q9UKT5 387 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 NOX1Q9Y5S8 564 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 CHD9Q3L8U1 2897 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF462Q96JM2 2506 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 FLNBO75369 2602 aaKnown RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 WASHC1A8K0Z3 465 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ETV6P41212 452 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 SEPHS1P49903 392 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 CLEC12AQ5QGZ9 265 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 C1orf94Q6P1W5 598 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 FAM26EQ8N5C1 309 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF676Q8N7Q3 588 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 DNASE2BQ8WZ79 361 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 DIRAS2Q96HU8 199 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 MTG2Q9H4K7 406 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 SNTG1Q9NSN8 517 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 NDRG4Q9ULP0 352 aaKnown RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 MTCH2Q9Y6C9 303 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 GAPDHSO14556 408 aaPredicted RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 DSCR3O14972 297 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF208O43345 1280 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 PIGAP37287 484 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 PBX2P40425 430 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 RNF144AP50876 292 aaPredicted RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ACTBP60709 375 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ACTG1P63261 375 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 EXOC3L2Q2M3D2 409 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 FCRL6Q6DN72 434 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 PYHIN1Q6K0P9 492 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 TMEM71Q6P5X7 295 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 SLC15A4Q8N697 577 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF740Q8NDX6 193 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 B3GNT7Q8NFL0 401 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 FAM110BQ8TC76 370 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 FCRL1Q96LA6 429 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 OR51V1Q9H2C8 321 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF639Q9UID6 485 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 BOKQ9UMX3 212 aaPredicted RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ASB4Q9Y574 426 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ABCA2Q9BZC7 2435 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 A0A0A6YYD5 115 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 NSG1A0A0A6YYJ2 146 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 A0A1W2PQF6 199 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 SOCS2O14508 198 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 DNPH1O43598 174 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ORC5O43913 435 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 SERPINI2O75830 405 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 CD14P08571 375 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 RGS6P49758 472 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF84P51523 738 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 SUMO3P55854 103 aaPredicted RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 SLC35D3Q5M8T2 416 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 DCST2Q5T1A1 773 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms