RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 C15orf41Q9Y2V0 281 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 LRRC42Q9Y546 428 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 ZNF264O43296 627 aa18.72■□□□□ 0.59
VCPKMT-202ENST00000395860 NDUFB5O43674 189 aa18.72■□□□□ 0.59
VCPKMT-202ENST00000395860 FADS1O60427 444 aa18.72■□□□□ 0.59
VCPKMT-202ENST00000395860 FMO6PO60774 539 aa18.72■□□□□ 0.59
VCPKMT-202ENST00000395860 HPRP00739 348 aa18.72■□□□□ 0.59
VCPKMT-202ENST00000395860 ALPLP05186 524 aa18.72■□□□□ 0.59
VCPKMT-202ENST00000395860 ENDOUP21128 410 aaKnown RBP18.72■□□□□ 0.59
VCPKMT-202ENST00000395860 ELAVL4P26378 380 aaKnown RBP18.72■□□□□ 0.59
VCPKMT-202ENST00000395860 SOX3P41225 446 aa18.72■□□□□ 0.59
VCPKMT-202ENST00000395860 HSPA13P48723 471 aa18.72■□□□□ 0.59
VCPKMT-202ENST00000395860 CLK3P49761 638 aaKnown RBP18.72■□□□□ 0.59
VCPKMT-202ENST00000395860 PPP2R2BQ00005 443 aa18.72■□□□□ 0.59
VCPKMT-202ENST00000395860 MICAQ29983 383 aa18.72■□□□□ 0.59
VCPKMT-202ENST00000395860 OPN5Q6U736 354 aa18.72■□□□□ 0.59
VCPKMT-202ENST00000395860 MARCH3Q86UD3 253 aa18.72■□□□□ 0.59
VCPKMT-202ENST00000395860 ZNF440Q8IYI8 595 aa18.72■□□□□ 0.59
VCPKMT-202ENST00000395860 FAM71CQ8NEG0 241 aa18.72■□□□□ 0.59
VCPKMT-202ENST00000395860 TTC9Q92623 222 aa18.72■□□□□ 0.59
VCPKMT-202ENST00000395860 HGDQ93099 445 aa18.72■□□□□ 0.59
VCPKMT-202ENST00000395860 SPACA9Q96E40 222 aaPredicted RBP18.72■□□□□ 0.59
VCPKMT-202ENST00000395860 NODALQ96S42 347 aa18.72■□□□□ 0.59
VCPKMT-202ENST00000395860 KIF17Q9P2E2 1029 aa18.72■□□□□ 0.59
VCPKMT-202ENST00000395860 TRBV4-1A0A0J9YWV2 114 aa18.71■□□□□ 0.59
VCPKMT-202ENST00000395860 A0A1W2PRQ8 180 aa18.71■□□□□ 0.59
VCPKMT-202ENST00000395860 C7orf72A4D263 438 aa18.71■□□□□ 0.59
VCPKMT-202ENST00000395860 SCO2O43819 266 aa18.71■□□□□ 0.59
VCPKMT-202ENST00000395860 MAN1A2O60476 641 aa18.71■□□□□ 0.59
VCPKMT-202ENST00000395860 CCNB2O95067 398 aa18.71■□□□□ 0.59
VCPKMT-202ENST00000395860 OR5F1O95221 314 aa18.71■□□□□ 0.59
VCPKMT-202ENST00000395860 HTR2AP28223 471 aa18.71■□□□□ 0.59
VCPKMT-202ENST00000395860 ACAA2P42765 397 aaKnown RBP18.71■□□□□ 0.59
VCPKMT-202ENST00000395860 SSR4P51571 173 aa18.71■□□□□ 0.59
VCPKMT-202ENST00000395860 MLF1P58340 268 aa18.71■□□□□ 0.59
VCPKMT-202ENST00000395860 DGCR6Q14129 220 aa18.71■□□□□ 0.59
VCPKMT-202ENST00000395860 OR1Q1Q15612 314 aa18.71■□□□□ 0.59
VCPKMT-202ENST00000395860 TBC1D25Q3MII6 688 aa18.71■□□□□ 0.59
VCPKMT-202ENST00000395860 DCAF10Q5QP82 559 aa18.71■□□□□ 0.59
VCPKMT-202ENST00000395860 TMCO5AQ8N6Q1 288 aa18.71■□□□□ 0.59
VCPKMT-202ENST00000395860 OR10G2Q8NGC3 310 aa18.71■□□□□ 0.59
VCPKMT-202ENST00000395860 GRHL3Q8TE85 626 aa18.71■□□□□ 0.59
VCPKMT-202ENST00000395860 ASB15Q8WXK1 588 aa18.71■□□□□ 0.59
VCPKMT-202ENST00000395860 ARSGQ96EG1 525 aa18.71■□□□□ 0.59
VCPKMT-202ENST00000395860 SLC41A3Q96GZ6 507 aa18.71■□□□□ 0.59
VCPKMT-202ENST00000395860 THOC3Q96J01 351 aaKnown RBP18.71■□□□□ 0.59
VCPKMT-202ENST00000395860 TMEM27Q9HBJ8 222 aa18.71■□□□□ 0.59
VCPKMT-202ENST00000395860 USE1Q9NZ43 259 aa18.71■□□□□ 0.59
VCPKMT-202ENST00000395860 CARD8Q9Y2G2 431 aa18.71■□□□□ 0.59
VCPKMT-202ENST00000395860 HEATR5AQ86XA9 2040 aa18.71■□□□□ 0.59
VCPKMT-202ENST00000395860 ANGPTL1O95841 491 aa18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 RYKP34925 604 aa18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 TRAM2Q15035 370 aa18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 TAF11Q15544 211 aa18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 NTRK2Q16620 822 aa18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 ANKRD34AQ69YU3 496 aa18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 GDF7Q7Z4P5 450 aa18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 ARMC10Q8N2F6 343 aa18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 SIRT6Q8N6T7 355 aa18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 ATG16L2Q8NAA4 619 aa18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 BRIX1Q8TDN6 353 aaKnown RBP18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 FER1L6-AS2Q96M78 137 aa18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 RTN4RQ9BZR6 473 aa18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 EXOSC3Q9NQT5 275 aaKnown RBP18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 MAN2C1Q9NTJ4 1040 aa18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 SMPD3Q9NY59 655 aaPredicted RBP18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 TRAPPC13A5PLN9 417 aa18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 FAAHO00519 579 aa18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 ADAM11O75078 769 aa18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 CCR4P51679 360 aa18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 EPS8Q12929 822 aa18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 SKP2Q13309 424 aa18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 H3F3CQ6NXT2 135 aa18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 TMEM156Q8N614 296 aa18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 SLC7A13Q8TCU3 470 aa18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 TRIM2Q9C040 744 aa18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 LAT2Q9GZY6 243 aa18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 ANKRD19PQ9H560 264 aa18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 ATP13A2Q9NQ11 1180 aa18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 SLC7A7Q9UM01 511 aa18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 ORC6Q9Y5N6 252 aa18.7■□□□□ 0.58
VCPKMT-202ENST00000395860 OIP5O43482 229 aa18.69■□□□□ 0.58
VCPKMT-202ENST00000395860 OR6B1O95007 311 aa18.69■□□□□ 0.58
VCPKMT-202ENST00000395860 DAPP51397 102 aa18.69■□□□□ 0.58
VCPKMT-202ENST00000395860 ZNF791Q3KP31 576 aaPredicted RBP18.69■□□□□ 0.58
VCPKMT-202ENST00000395860 JMJD6Q6NYC1 403 aaPredicted RBP18.69■□□□□ 0.58
VCPKMT-202ENST00000395860 PODNL1Q6PEZ8 512 aa18.69■□□□□ 0.58
VCPKMT-202ENST00000395860 CBLN3Q6UW01 205 aa18.69■□□□□ 0.58
VCPKMT-202ENST00000395860 IL20RBQ6UXL0 311 aa18.69■□□□□ 0.58
VCPKMT-202ENST00000395860 OR10G3Q8NGC4 313 aa18.69■□□□□ 0.58
VCPKMT-202ENST00000395860 OR9Q2Q8NGE9 314 aa18.69■□□□□ 0.58
VCPKMT-202ENST00000395860 SLC38A4Q969I6 547 aa18.69■□□□□ 0.58
VCPKMT-202ENST00000395860 RYDENQ9NUL5 291 aaKnown RBP18.69■□□□□ 0.58
VCPKMT-202ENST00000395860 KLRF1Q9NZS2 232 aa18.69■□□□□ 0.58
VCPKMT-202ENST00000395860 DOCK10Q96BY6 2186 aa18.69■□□□□ 0.58
VCPKMT-202ENST00000395860 TP53I11O14683 189 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 HCRTR2O43614 444 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 EIF4E2O60573 245 aaKnown RBP18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 LINGO3P0C6S8 592 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 THRBP10828 461 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms