RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 RRAGDQ9NQL2 400 aaPredicted RBP18.77■□□□□ 0.6
TRAF4-203ENST00000394925 UBQLN4Q9NRR5 601 aa18.77■□□□□ 0.6
TRAF4-203ENST00000394925 KLHL13Q9P2N7 655 aa18.77■□□□□ 0.6
TRAF4-203ENST00000394925 GDF2Q9UK05 429 aaPredicted RBP18.77■□□□□ 0.6
TRAF4-203ENST00000394925 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.76■□□□□ 0.59
TRAF4-203ENST00000394925 DPRXA6NFQ7 191 aa18.76■□□□□ 0.59
TRAF4-203ENST00000394925 RSL1D1O76021 490 aaKnown RBP18.76■□□□□ 0.59
TRAF4-203ENST00000394925 THBS1P07996 1170 aa18.76■□□□□ 0.59
TRAF4-203ENST00000394925 LINGO3P0C6S8 592 aa18.76■□□□□ 0.59
TRAF4-203ENST00000394925 FOXF1Q12946 379 aa18.76■□□□□ 0.59
TRAF4-203ENST00000394925 CD226Q15762 336 aa18.76■□□□□ 0.59
TRAF4-203ENST00000394925 DUSP5Q16690 384 aa18.76■□□□□ 0.59
TRAF4-203ENST00000394925 CHRFAM7AQ494W8 412 aa18.76■□□□□ 0.59
TRAF4-203ENST00000394925 CCNJQ5T5M9 372 aa18.76■□□□□ 0.59
TRAF4-203ENST00000394925 DNM1P46Q6ZS02 220 aa18.76■□□□□ 0.59
TRAF4-203ENST00000394925 MISPQ8IVT2 679 aa18.76■□□□□ 0.59
TRAF4-203ENST00000394925 PIWIL2Q8TC59 973 aaKnown RBP18.76■□□□□ 0.59
TRAF4-203ENST00000394925 TMEM158Q8WZ71 300 aa18.76■□□□□ 0.59
TRAF4-203ENST00000394925 CPNE4Q96A23 557 aaPredicted RBP18.76■□□□□ 0.59
TRAF4-203ENST00000394925 GIMAP5Q96F15 307 aa18.76■□□□□ 0.59
TRAF4-203ENST00000394925 TRIM2Q9C040 744 aa18.76■□□□□ 0.59
TRAF4-203ENST00000394925 ALG2Q9H553 416 aa18.76■□□□□ 0.59
TRAF4-203ENST00000394925 LRTM1Q9HBL6 345 aa18.76■□□□□ 0.59
TRAF4-203ENST00000394925 A8MV72 311 aaPredicted RBP18.75■□□□□ 0.59
TRAF4-203ENST00000394925 EFNA2O43921 213 aa18.75■□□□□ 0.59
TRAF4-203ENST00000394925 SEC22BO75396 215 aa18.75■□□□□ 0.59
TRAF4-203ENST00000394925 PRKD3O94806 890 aa18.75■□□□□ 0.59
TRAF4-203ENST00000394925 CD8AP01732 235 aa18.75■□□□□ 0.59
TRAF4-203ENST00000394925 FESP07332 822 aa18.75■□□□□ 0.59
TRAF4-203ENST00000394925 EIF1P41567 113 aaKnown RBP18.75■□□□□ 0.59
TRAF4-203ENST00000394925 MANFP55145 182 aaKnown RBP18.75■□□□□ 0.59
TRAF4-203ENST00000394925 ZNF385BQ569K4 471 aa18.75■□□□□ 0.59
TRAF4-203ENST00000394925 DNAJC14Q6Y2X3 702 aaPredicted RBP18.75■□□□□ 0.59
TRAF4-203ENST00000394925 FCRLAQ7L513 359 aa18.75■□□□□ 0.59
TRAF4-203ENST00000394925 BHLHA15Q7RTS1 189 aaPredicted RBP18.75■□□□□ 0.59
TRAF4-203ENST00000394925 COX18Q8N8Q8 333 aa18.75■□□□□ 0.59
TRAF4-203ENST00000394925 ZFP28Q8NHY6 868 aa18.75■□□□□ 0.59
TRAF4-203ENST00000394925 C16orf58Q96GQ5 468 aa18.75■□□□□ 0.59
TRAF4-203ENST00000394925 MS4A4EQ96PG1 132 aa18.75■□□□□ 0.59
TRAF4-203ENST00000394925 TRAF4Q9BUZ4 470 aaPredicted RBP18.75■□□□□ 0.59
TRAF4-203ENST00000394925 POTEKPQ9BYX7 375 aa18.75■□□□□ 0.59
TRAF4-203ENST00000394925 IQCGQ9H095 443 aaKnown RBP18.75■□□□□ 0.59
TRAF4-203ENST00000394925 A0A1W2PQD3 144 aa18.74■□□□□ 0.59
TRAF4-203ENST00000394925 AKAP10O43572 662 aa18.74■□□□□ 0.59
TRAF4-203ENST00000394925 SSX4O60224 188 aa18.74■□□□□ 0.59
TRAF4-203ENST00000394925 RAMP1O60894 148 aa18.74■□□□□ 0.59
TRAF4-203ENST00000394925 NUDT14O95848 222 aa18.74■□□□□ 0.59
TRAF4-203ENST00000394925 YES1P07947 543 aa18.74■□□□□ 0.59
TRAF4-203ENST00000394925 GSTA1P08263 222 aa18.74■□□□□ 0.59
TRAF4-203ENST00000394925 ALOX5P09917 674 aa18.74■□□□□ 0.59
TRAF4-203ENST00000394925 ECHS1P30084 290 aa18.74■□□□□ 0.59
TRAF4-203ENST00000394925 ITGADQ13349 1161 aa18.74■□□□□ 0.59
TRAF4-203ENST00000394925 KIAA0040Q15053 153 aa18.74■□□□□ 0.59
TRAF4-203ENST00000394925 P2RY6Q15077 328 aa18.74■□□□□ 0.59
TRAF4-203ENST00000394925 TMEM176BQ3YBM2 270 aaPredicted RBP18.74■□□□□ 0.59
TRAF4-203ENST00000394925 SEZ6L2Q6UXD5 910 aa18.74■□□□□ 0.59
TRAF4-203ENST00000394925 ATP6V1C2Q8NEY4 427 aa18.74■□□□□ 0.59
TRAF4-203ENST00000394925 FBXO27Q8NI29 283 aa18.74■□□□□ 0.59
TRAF4-203ENST00000394925 JADE3Q92613 823 aa18.74■□□□□ 0.59
TRAF4-203ENST00000394925 BARX1Q9HBU1 254 aaPredicted RBP18.74■□□□□ 0.59
TRAF4-203ENST00000394925 TNFRSF12AQ9NP84 129 aa18.74■□□□□ 0.59
TRAF4-203ENST00000394925 CISD1Q9NZ45 108 aaKnown RBP18.74■□□□□ 0.59
TRAF4-203ENST00000394925 SH3BP4Q9P0V3 963 aa18.74■□□□□ 0.59
TRAF4-203ENST00000394925 NTMQ9P121 344 aa18.74■□□□□ 0.59
TRAF4-203ENST00000394925 ZNF814B7Z6K7 855 aa18.73■□□□□ 0.59
TRAF4-203ENST00000394925 ZNF195O14628 629 aa18.73■□□□□ 0.59
TRAF4-203ENST00000394925 GPRIN2O60269 458 aa18.73■□□□□ 0.59
TRAF4-203ENST00000394925 PYGBP11216 843 aa18.73■□□□□ 0.59
TRAF4-203ENST00000394925 PTNP21246 168 aa18.73■□□□□ 0.59
TRAF4-203ENST00000394925 ELK4P28324 431 aa18.73■□□□□ 0.59
TRAF4-203ENST00000394925 LCN1P31025 176 aa18.73■□□□□ 0.59
TRAF4-203ENST00000394925 SERPINB4P48594 390 aa18.73■□□□□ 0.59
TRAF4-203ENST00000394925 RNF144AP50876 292 aaPredicted RBP18.73■□□□□ 0.59
TRAF4-203ENST00000394925 C21orf58P58505 322 aa18.73■□□□□ 0.59
TRAF4-203ENST00000394925 ZNF117Q03924 483 aa18.73■□□□□ 0.59
TRAF4-203ENST00000394925 STK11Q15831 433 aa18.73■□□□□ 0.59
TRAF4-203ENST00000394925 PHOSPHO1Q8TCT1 267 aa18.73■□□□□ 0.59
TRAF4-203ENST00000394925 ANP32BQ92688 251 aaKnown RBP18.73■□□□□ 0.59
TRAF4-203ENST00000394925 PPCDCQ96CD2 204 aa18.73■□□□□ 0.59
TRAF4-203ENST00000394925 USB1Q9BQ65 265 aaKnown RBP18.73■□□□□ 0.59
TRAF4-203ENST00000394925 RHNO1Q9BSD3 238 aa18.73■□□□□ 0.59
TRAF4-203ENST00000394925 GP6Q9HCN6 339 aa18.73■□□□□ 0.59
TRAF4-203ENST00000394925 CCL27Q9Y4X3 112 aa18.73■□□□□ 0.59
TRAF4-203ENST00000394925 PLCE1Q9P212 2302 aa18.73■□□□□ 0.59
TRAF4-203ENST00000394925 IGHV3-15A0A0B4J1V0 119 aa18.72■□□□□ 0.59
TRAF4-203ENST00000394925 GJE1A6NN92 205 aa18.72■□□□□ 0.59
TRAF4-203ENST00000394925 OIP5O43482 229 aa18.72■□□□□ 0.59
TRAF4-203ENST00000394925 LYZL6O75951 148 aa18.72■□□□□ 0.59
TRAF4-203ENST00000394925 MYL2P10916 166 aa18.72■□□□□ 0.59
TRAF4-203ENST00000394925 EFNA1P20827 205 aaPredicted RBP18.72■□□□□ 0.59
TRAF4-203ENST00000394925 ENPP1P22413 925 aa18.72■□□□□ 0.59
TRAF4-203ENST00000394925 POU6F2P78424 691 aaPredicted RBP18.72■□□□□ 0.59
TRAF4-203ENST00000394925 DTX2Q86UW9 622 aa18.72■□□□□ 0.59
TRAF4-203ENST00000394925 TDRPQ86YL5 185 aa18.72■□□□□ 0.59
TRAF4-203ENST00000394925 CCDC126Q96EE4 140 aa18.72■□□□□ 0.59
TRAF4-203ENST00000394925 CHMP6Q96FZ7 201 aa18.72■□□□□ 0.59
TRAF4-203ENST00000394925 TSSK3Q96PN8 268 aa18.72■□□□□ 0.59
TRAF4-203ENST00000394925 REEP4Q9H6H4 257 aa18.72■□□□□ 0.59
TRAF4-203ENST00000394925 COQ10BQ9H8M1 238 aa18.72■□□□□ 0.59
TRAF4-203ENST00000394925 FAIMQ9NVQ4 179 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms