RNA–Protein interactions for RNA: ENST00000394547.7

TRPT1-203, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 1 (best) BASIC

Gene TRPT1, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-203ENST00000394547 SF3B4Q15427 424 aaKnown RBP eCLIP17.26■□□□□ 0.35
TRPT1-203ENST00000394547 MAPK11Q15759 364 aa17.26■□□□□ 0.35
TRPT1-203ENST00000394547 MAPK14Q16539 360 aa17.26■□□□□ 0.35
TRPT1-203ENST00000394547 EIF3MQ7L2H7 374 aaKnown RBP17.26■□□□□ 0.35
TRPT1-203ENST00000394547 PCYOX1LQ8NBM8 494 aa17.26■□□□□ 0.35
TRPT1-203ENST00000394547 SSC4DQ8WTU2 575 aa17.26■□□□□ 0.35
TRPT1-203ENST00000394547 SLC38A5Q8WUX1 472 aa17.26■□□□□ 0.35
TRPT1-203ENST00000394547 SFXN2Q96NB2 322 aa17.26■□□□□ 0.35
TRPT1-203ENST00000394547 CCDC106Q9BWC9 280 aa17.26■□□□□ 0.35
TRPT1-203ENST00000394547 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.26■□□□□ 0.35
TRPT1-203ENST00000394547 SH3BGRL2Q9UJC5 107 aa17.26■□□□□ 0.35
TRPT1-203ENST00000394547 ICAM5Q9UMF0 924 aa17.26■□□□□ 0.35
TRPT1-203ENST00000394547 A0A0G2JPF8 293 aa17.25■□□□□ 0.35
TRPT1-203ENST00000394547 CENPVL1A0A0U1RR11 272 aa17.25■□□□□ 0.35
TRPT1-203ENST00000394547 HNRNPCL2B2RXH8 293 aa17.25■□□□□ 0.35
TRPT1-203ENST00000394547 HNRNPCL3B7ZW38 293 aa17.25■□□□□ 0.35
TRPT1-203ENST00000394547 HNRNPCL1O60812 293 aaKnown RBP17.25■□□□□ 0.35
TRPT1-203ENST00000394547 CSTAP01040 98 aa17.25■□□□□ 0.35
TRPT1-203ENST00000394547 LDLRP01130 860 aa17.25■□□□□ 0.35
TRPT1-203ENST00000394547 DBIP07108 87 aaKnown RBP17.25■□□□□ 0.35
TRPT1-203ENST00000394547 HNRNPCL4P0DMR1 293 aa17.25■□□□□ 0.35
TRPT1-203ENST00000394547 ESRRAP11474 423 aaPredicted RBP17.25■□□□□ 0.35
TRPT1-203ENST00000394547 CPN1P15169 458 aa17.25■□□□□ 0.35
TRPT1-203ENST00000394547 B3GALT5-AS1P59052 145 aa17.25■□□□□ 0.35
TRPT1-203ENST00000394547 TMEM44Q2T9K0 475 aa17.25■□□□□ 0.35
TRPT1-203ENST00000394547 GCNT6Q5T4J0 391 aa17.25■□□□□ 0.35
TRPT1-203ENST00000394547 RAET1LQ5VY80 246 aa17.25■□□□□ 0.35
TRPT1-203ENST00000394547 REP15Q6BDI9 236 aa17.25■□□□□ 0.35
TRPT1-203ENST00000394547 TMEM211Q6ICI0 200 aa17.25■□□□□ 0.35
TRPT1-203ENST00000394547 OLIG3Q7RTU3 272 aa17.25■□□□□ 0.35
TRPT1-203ENST00000394547 PIGWQ7Z7B1 504 aa17.25■□□□□ 0.35
TRPT1-203ENST00000394547 MTDHQ86UE4 582 aaKnown RBP17.25■□□□□ 0.35
TRPT1-203ENST00000394547 SNX32Q86XE0 403 aa17.25■□□□□ 0.35
TRPT1-203ENST00000394547 PEX5LQ8IYB4 626 aa17.25■□□□□ 0.35
TRPT1-203ENST00000394547 FAM71CQ8NEG0 241 aa17.25■□□□□ 0.35
TRPT1-203ENST00000394547 ARSGQ96EG1 525 aa17.25■□□□□ 0.35
TRPT1-203ENST00000394547 TMEM19Q96HH6 336 aa17.25■□□□□ 0.35
TRPT1-203ENST00000394547 SH3YL1Q96HL8 342 aaPredicted RBP17.25■□□□□ 0.35
TRPT1-203ENST00000394547 DMRTA2Q96SC8 542 aa17.25■□□□□ 0.35
TRPT1-203ENST00000394547 LAT2Q9GZY6 243 aa17.25■□□□□ 0.35
TRPT1-203ENST00000394547 MYLK2Q9H1R3 596 aa17.25■□□□□ 0.35
TRPT1-203ENST00000394547 IKZF5Q9H5V7 419 aa17.25■□□□□ 0.35
TRPT1-203ENST00000394547 TMEM38AQ9H6F2 299 aa17.25■□□□□ 0.35
TRPT1-203ENST00000394547 BCL2L10Q9HD36 194 aa17.25■□□□□ 0.35
TRPT1-203ENST00000394547 ARMCX1Q9P291 453 aa17.25■□□□□ 0.35
TRPT1-203ENST00000394547 CARD8Q9Y2G2 431 aa17.25■□□□□ 0.35
TRPT1-203ENST00000394547 AHRRA9YTQ3 701 aa17.24■□□□□ 0.35
TRPT1-203ENST00000394547 MRASO14807 208 aa17.24■□□□□ 0.35
TRPT1-203ENST00000394547 DNAJA2O60884 412 aa17.24■□□□□ 0.35
TRPT1-203ENST00000394547 ARAFP10398 606 aa17.24■□□□□ 0.35
TRPT1-203ENST00000394547 ACVR2AP27037 513 aa17.24■□□□□ 0.35
TRPT1-203ENST00000394547 PGM1P36871 562 aa17.24■□□□□ 0.35
TRPT1-203ENST00000394547 KCNJ10P78508 379 aa17.24■□□□□ 0.35
TRPT1-203ENST00000394547 SKP2Q13309 424 aa17.24■□□□□ 0.35
TRPT1-203ENST00000394547 CBFBQ13951 182 aa17.24■□□□□ 0.35
TRPT1-203ENST00000394547 BCL2A1Q16548 175 aa17.24■□□□□ 0.35
TRPT1-203ENST00000394547 ZSWIM7Q19AV6 140 aa17.24■□□□□ 0.35
TRPT1-203ENST00000394547 PLPPR5Q32ZL2 321 aa17.24■□□□□ 0.35
TRPT1-203ENST00000394547 ZNF585AQ6P3V2 769 aa17.24■□□□□ 0.35
TRPT1-203ENST00000394547 CBLN3Q6UW01 205 aa17.24■□□□□ 0.35
TRPT1-203ENST00000394547 RPTNQ6XPR3 784 aa17.24■□□□□ 0.35
TRPT1-203ENST00000394547 OR5M9Q8NGP3 310 aa17.24■□□□□ 0.35
TRPT1-203ENST00000394547 OR5W2Q8NH69 310 aa17.24■□□□□ 0.35
TRPT1-203ENST00000394547 BBS10Q8TAM1 723 aa17.24■□□□□ 0.35
TRPT1-203ENST00000394547 WDR60Q8WVS4 1066 aa17.24■□□□□ 0.35
TRPT1-203ENST00000394547 SH3GL1Q99961 368 aa17.24■□□□□ 0.35
TRPT1-203ENST00000394547 TREX2Q9BQ50 279 aaPredicted RBP17.24■□□□□ 0.35
TRPT1-203ENST00000394547 EXOSC3Q9NQT5 275 aaKnown RBP17.24■□□□□ 0.35
TRPT1-203ENST00000394547 MED17Q9NVC6 651 aa17.24■□□□□ 0.35
TRPT1-203ENST00000394547 GID8Q9NWU2 228 aa17.24■□□□□ 0.35
TRPT1-203ENST00000394547 TNFRSF10DQ9UBN6 386 aa17.24■□□□□ 0.35
TRPT1-203ENST00000394547 RPH3AQ9Y2J0 694 aaPredicted RBP17.24■□□□□ 0.35
TRPT1-203ENST00000394547 USP9XQ93008 2570 aaPredicted RBP17.23■□□□□ 0.35
TRPT1-203ENST00000394547 LOC100653049A0A140TA62 436 aa17.23■□□□□ 0.35
TRPT1-203ENST00000394547 C5orf58C9J3I9 102 aa17.23■□□□□ 0.35
TRPT1-203ENST00000394547 SHOX2O60902 331 aaPredicted RBP17.23■□□□□ 0.35
TRPT1-203ENST00000394547 KRT34O76011 436 aa17.23■□□□□ 0.35
TRPT1-203ENST00000394547 THBS1P07996 1170 aa17.23■□□□□ 0.35
TRPT1-203ENST00000394547 NUDT7P0C024 238 aa17.23■□□□□ 0.35
TRPT1-203ENST00000394547 NID1P14543 1247 aa17.23■□□□□ 0.35
TRPT1-203ENST00000394547 IL7RP16871 459 aa17.23■□□□□ 0.35
TRPT1-203ENST00000394547 ADH6P28332 368 aa17.23■□□□□ 0.35
TRPT1-203ENST00000394547 EIF1P41567 113 aaKnown RBP17.23■□□□□ 0.35
TRPT1-203ENST00000394547 LHX2P50458 406 aa17.23■□□□□ 0.35
TRPT1-203ENST00000394547 RBBP4Q09028 425 aa17.23■□□□□ 0.35
TRPT1-203ENST00000394547 LIN52Q52LA3 116 aa17.23■□□□□ 0.35
TRPT1-203ENST00000394547 DCST1Q5T197 706 aa17.23■□□□□ 0.35
TRPT1-203ENST00000394547 ARSKQ6UWY0 536 aa17.23■□□□□ 0.35
TRPT1-203ENST00000394547 ULK2Q8IYT8 1036 aa17.23■□□□□ 0.35
TRPT1-203ENST00000394547 GTPBP8Q8N3Z3 284 aaPredicted RBP17.23■□□□□ 0.35
TRPT1-203ENST00000394547 OR8J3Q8NGG0 315 aa17.23■□□□□ 0.35
TRPT1-203ENST00000394547 ZG16BQ96DA0 208 aa17.23■□□□□ 0.35
TRPT1-203ENST00000394547 WDYHV1Q96HA8 205 aa17.23■□□□□ 0.35
TRPT1-203ENST00000394547 CCDC120Q96HB5 630 aa17.23■□□□□ 0.35
TRPT1-203ENST00000394547 THUMPD3Q9BV44 507 aaKnown RBP17.23■□□□□ 0.35
TRPT1-203ENST00000394547 SPATA9Q9BWV2 254 aa17.23■□□□□ 0.35
TRPT1-203ENST00000394547 QRSL1Q9H0R6 528 aaKnown RBP17.23■□□□□ 0.35
TRPT1-203ENST00000394547 CACYBPQ9HB71 228 aaKnown RBP17.23■□□□□ 0.35
TRPT1-203ENST00000394547 STOML1Q9UBI4 398 aa17.23■□□□□ 0.35
TRPT1-203ENST00000394547 PRDM4Q9UKN5 801 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms